Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt5c10
(610 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF038609-3|AAU87825.1| 193|Caenorhabditis elegans Hypothetical ... 190 7e-49
Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical pr... 30 1.5
Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical pr... 30 1.5
Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical p... 30 1.5
Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical p... 30 1.5
AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane... 30 1.5
U80845-5|ABB51196.1| 423|Caenorhabditis elegans Temporarily ass... 29 2.0
AF271359-1|AAF75788.1| 497|Caenorhabditis elegans STE20-like ki... 29 2.0
AC006630-2|ABD63233.1| 495|Caenorhabditis elegans Hypothetical ... 29 2.0
AC006630-1|ABD63234.1| 497|Caenorhabditis elegans Hypothetical ... 29 2.0
Z81530-2|CAB04306.1| 359|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z70750-3|CAA94738.1| 374|Caenorhabditis elegans Hypothetical pr... 29 2.6
AC024791-36|AAF60654.3| 481|Caenorhabditis elegans Innexin prot... 29 2.6
Z81586-4|CAB04688.2| 366|Caenorhabditis elegans Hypothetical pr... 28 6.0
AC006627-4|AAK85459.1| 712|Caenorhabditis elegans Hypothetical ... 28 6.0
Z71180-3|CAA94892.2| 763|Caenorhabditis elegans Hypothetical pr... 27 7.9
Z35719-8|CAA84801.1| 1521|Caenorhabditis elegans Hypothetical pr... 27 7.9
Z35663-17|CAA84737.1| 1521|Caenorhabditis elegans Hypothetical p... 27 7.9
D14635-1|BAA03484.1| 1521|Caenorhabditis elegans EMB-5 protein. 27 7.9
AL021474-7|CAA16311.2| 763|Caenorhabditis elegans Hypothetical ... 27 7.9
>AF038609-3|AAU87825.1| 193|Caenorhabditis elegans Hypothetical
protein C54E4.5 protein.
Length = 193
Score = 190 bits (463), Expect = 7e-49
Identities = 82/158 (51%), Positives = 106/158 (67%)
Frame = +2
Query: 134 EAFRDYNIDENDPIKMRVRKTYYDMHTNMTVDFVKSKMEKWLKFNHFKATVKDALIKLND 313
+ +R Y++ DPI++RVR Y+ H TVDFVK +KWLKF+H K + L L
Sbjct: 14 KTYRIYDVKAEDPIQVRVRTHYFTQHQKQTVDFVKEMHQKWLKFDHAKMPILGCLDMLAT 73
Query: 314 LVDESDPDTDLPNIVHAFQTAERIREEHPDEDWFQLIGLMHDLGKVMAFYDEPQWCVVGD 493
+DESDPD D N++HA+QTAE+IRE HPD+ W L GL+HDLGK+M+ + E QW V GD
Sbjct: 74 FLDESDPDVDEANLIHAYQTAEKIRENHPDKPWMHLAGLIHDLGKIMSVWGEEQWAVTGD 133
Query: 494 TFPVGCKWGKSIVYGDDSFQRNPDTYNPKYNTEHGMYK 607
T+PVGC SIVYG SF NPD +P Y T+ GMY+
Sbjct: 134 TYPVGCAPAASIVYGKSSFDGNPDISHPVYGTQMGMYQ 171
>Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical
protein K08E5.3b protein.
Length = 3183
Score = 29.9 bits (64), Expect = 1.5
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 8/63 (12%)
Frame = -3
Query: 230 SQQSYSCACRNMFSELSSLWGR--SRRC------CSPGRLPRACRHTWPPDAVAGMGRSW 75
++ SYSC CR F+++S+ + + RRC C+ L ++ + DA G +
Sbjct: 349 TEHSYSCRCRPGFADVSAAFNKLPGRRCIEAVNECASPSLNDCSKNAFCEDAKEGYICTC 408
Query: 74 RPG 66
RPG
Sbjct: 409 RPG 411
>Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical protein
K08E5.3a protein.
Length = 3767
Score = 29.9 bits (64), Expect = 1.5
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 8/63 (12%)
Frame = -3
Query: 230 SQQSYSCACRNMFSELSSLWGR--SRRC------CSPGRLPRACRHTWPPDAVAGMGRSW 75
++ SYSC CR F+++S+ + + RRC C+ L ++ + DA G +
Sbjct: 933 TEHSYSCRCRPGFADVSAAFNKLPGRRCIEAVNECASPSLNDCSKNAFCEDAKEGYICTC 992
Query: 74 RPG 66
RPG
Sbjct: 993 RPG 995
>Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical
protein K08E5.3b protein.
Length = 3183
Score = 29.9 bits (64), Expect = 1.5
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 8/63 (12%)
Frame = -3
Query: 230 SQQSYSCACRNMFSELSSLWGR--SRRC------CSPGRLPRACRHTWPPDAVAGMGRSW 75
++ SYSC CR F+++S+ + + RRC C+ L ++ + DA G +
Sbjct: 349 TEHSYSCRCRPGFADVSAAFNKLPGRRCIEAVNECASPSLNDCSKNAFCEDAKEGYICTC 408
Query: 74 RPG 66
RPG
Sbjct: 409 RPG 411
>Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical
protein K08E5.3a protein.
Length = 3767
Score = 29.9 bits (64), Expect = 1.5
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 8/63 (12%)
Frame = -3
Query: 230 SQQSYSCACRNMFSELSSLWGR--SRRC------CSPGRLPRACRHTWPPDAVAGMGRSW 75
++ SYSC CR F+++S+ + + RRC C+ L ++ + DA G +
Sbjct: 933 TEHSYSCRCRPGFADVSAAFNKLPGRRCIEAVNECASPSLNDCSKNAFCEDAKEGYICTC 992
Query: 74 RPG 66
RPG
Sbjct: 993 RPG 995
>AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane cell
adhesion receptorMUA-3 precursor protein.
Length = 3767
Score = 29.9 bits (64), Expect = 1.5
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 8/63 (12%)
Frame = -3
Query: 230 SQQSYSCACRNMFSELSSLWGR--SRRC------CSPGRLPRACRHTWPPDAVAGMGRSW 75
++ SYSC CR F+++S+ + + RRC C+ L ++ + DA G +
Sbjct: 933 TEHSYSCRCRPGFADVSAAFNKLPGRRCIEAVNECASPSLNDCSKNAFCEDAKEGYICTC 992
Query: 74 RPG 66
RPG
Sbjct: 993 RPG 995
>U80845-5|ABB51196.1| 423|Caenorhabditis elegans Temporarily
assigned gene nameprotein 306 protein.
Length = 423
Score = 29.5 bits (63), Expect = 2.0
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 4/52 (7%)
Frame = -1
Query: 484 HAPLWFIVE---CHNLSEIMHQSNK-LEPIFIGVFLPDPLSGLEGVHDVWEI 341
H+ LW ++E ++S+IM K L I L D L GL+ +HD+ +I
Sbjct: 100 HSDLWIVMEYCGAGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDLKKI 151
>AF271359-1|AAF75788.1| 497|Caenorhabditis elegans STE20-like
kinase MST protein.
Length = 497
Score = 29.5 bits (63), Expect = 2.0
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 4/52 (7%)
Frame = -1
Query: 484 HAPLWFIVE---CHNLSEIMHQSNK-LEPIFIGVFLPDPLSGLEGVHDVWEI 341
H+ LW ++E ++S+IM K L I L D L GL+ +HD+ +I
Sbjct: 100 HSDLWIVMEYCGAGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDLKKI 151
>AC006630-2|ABD63233.1| 495|Caenorhabditis elegans Hypothetical
protein F14H12.4a protein.
Length = 495
Score = 29.5 bits (63), Expect = 2.0
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 4/52 (7%)
Frame = -1
Query: 484 HAPLWFIVE---CHNLSEIMHQSNK-LEPIFIGVFLPDPLSGLEGVHDVWEI 341
H+ LW ++E ++S+IM K L I L D L GL+ +HD+ +I
Sbjct: 100 HSDLWIVMEYCGAGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDLKKI 151
>AC006630-1|ABD63234.1| 497|Caenorhabditis elegans Hypothetical
protein F14H12.4b protein.
Length = 497
Score = 29.5 bits (63), Expect = 2.0
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 4/52 (7%)
Frame = -1
Query: 484 HAPLWFIVE---CHNLSEIMHQSNK-LEPIFIGVFLPDPLSGLEGVHDVWEI 341
H+ LW ++E ++S+IM K L I L D L GL+ +HD+ +I
Sbjct: 100 HSDLWIVMEYCGAGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDLKKI 151
>Z81530-2|CAB04306.1| 359|Caenorhabditis elegans Hypothetical
protein F36D1.2 protein.
Length = 359
Score = 29.1 bits (62), Expect = 2.6
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -1
Query: 460 ECHNLSEIMHQSNKLEPIFIGVFL 389
ECH+L + NK +PIFI +
Sbjct: 89 ECHHLGRCSFEKNKFDPIFISAIM 112
>Z70750-3|CAA94738.1| 374|Caenorhabditis elegans Hypothetical
protein C50F4.3 protein.
Length = 374
Score = 29.1 bits (62), Expect = 2.6
Identities = 20/69 (28%), Positives = 36/69 (52%)
Frame = +2
Query: 134 EAFRDYNIDENDPIKMRVRKTYYDMHTNMTVDFVKSKMEKWLKFNHFKATVKDALIKLND 313
++F + NID N+P K+ K + D ++ K ++EK +F F AT + + K+N
Sbjct: 28 DSFFEINIDRNNPEKL--YKEFEDFIVKYKRNY-KDEIEKKFRFQQFVAT-HNRVGKMNK 83
Query: 314 LVDESDPDT 340
++ DT
Sbjct: 84 AAKKAGHDT 92
>AC024791-36|AAF60654.3| 481|Caenorhabditis elegans Innexin protein
21 protein.
Length = 481
Score = 29.1 bits (62), Expect = 2.6
Identities = 13/38 (34%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Frame = -1
Query: 304 LDESILNSGFEVIEL--QPLFHFTFDKVNSHIRVHVVI 197
L E + N GF V+E+ L H+ D+ HI +H+++
Sbjct: 354 LVEHLGNDGFLVVEMVYDMLHHYECDRFTEHIWMHIIV 391
>Z81586-4|CAB04688.2| 366|Caenorhabditis elegans Hypothetical
protein T05F1.5 protein.
Length = 366
Score = 27.9 bits (59), Expect = 6.0
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = +2
Query: 128 PVEAFRDYNIDENDPIKMRVRKTYYDMHT 214
P ++F +NID+ D I + T+Y++H+
Sbjct: 286 PAQSFFFHNIDQKDVIALCALATHYNLHS 314
>AC006627-4|AAK85459.1| 712|Caenorhabditis elegans Hypothetical
protein E01A2.2a protein.
Length = 712
Score = 27.9 bits (59), Expect = 6.0
Identities = 25/108 (23%), Positives = 42/108 (38%), Gaps = 1/108 (0%)
Frame = +2
Query: 101 RPEAKYDDKPVEAFRDYNIDEN-DPIKMRVRKTYYDMHTNMTVDFVKSKMEKWLKFNHFK 277
RP + DD V+ R + D++ DP+ + ++ +K+L
Sbjct: 38 RPGGRRDDYQVKRSRGDDADDSFDPVSRSGNGSDLPTESDSIYSGPLQTFKKFLTSQEDD 97
Query: 278 ATVKDALIKLNDLVDESDPDTDLPNIVHAFQTAERIREEHPDEDWFQL 421
+ +DA+ K N+ E H ER H DE+WF+L
Sbjct: 98 ISEEDAIKKYNEYKTE-----------HRKHQLERFFRAHKDEEWFRL 134
>Z71180-3|CAA94892.2| 763|Caenorhabditis elegans Hypothetical
protein F22E12.1 protein.
Length = 763
Score = 27.5 bits (58), Expect = 7.9
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = +2
Query: 122 DKPVEAFRDYNIDENDPIKMRVRKTYYDMH 211
+ P E+F Y+ +E P+++ + +YYD H
Sbjct: 169 NNPTESFHQYS-EEPYPVQVPLENSYYDSH 197
>Z35719-8|CAA84801.1| 1521|Caenorhabditis elegans Hypothetical
protein T04A8.14 protein.
Length = 1521
Score = 27.5 bits (58), Expect = 7.9
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = -1
Query: 448 LSEIMHQSNKLEPIFIGVFLPDPLSGLEGVHDVWEI 341
L I +SN EP FIG + + + L ++++W +
Sbjct: 355 LQFIRVRSNSFEPTFIGFYRKEDIDNLLTMNNLWRV 390
>Z35663-17|CAA84737.1| 1521|Caenorhabditis elegans Hypothetical
protein T04A8.14 protein.
Length = 1521
Score = 27.5 bits (58), Expect = 7.9
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = -1
Query: 448 LSEIMHQSNKLEPIFIGVFLPDPLSGLEGVHDVWEI 341
L I +SN EP FIG + + + L ++++W +
Sbjct: 355 LQFIRVRSNSFEPTFIGFYRKEDIDNLLTMNNLWRV 390
>D14635-1|BAA03484.1| 1521|Caenorhabditis elegans EMB-5 protein.
Length = 1521
Score = 27.5 bits (58), Expect = 7.9
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = -1
Query: 448 LSEIMHQSNKLEPIFIGVFLPDPLSGLEGVHDVWEI 341
L I +SN EP FIG + + + L ++++W +
Sbjct: 355 LQFIRVRSNSFEPTFIGFYRKEDIDNLLTMNNLWRV 390
>AL021474-7|CAA16311.2| 763|Caenorhabditis elegans Hypothetical
protein F22E12.1 protein.
Length = 763
Score = 27.5 bits (58), Expect = 7.9
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = +2
Query: 122 DKPVEAFRDYNIDENDPIKMRVRKTYYDMH 211
+ P E+F Y+ +E P+++ + +YYD H
Sbjct: 169 NNPTESFHQYS-EEPYPVQVPLENSYYDSH 197
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,393,258
Number of Sequences: 27780
Number of extensions: 357376
Number of successful extensions: 1040
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 958
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1040
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1311096392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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