Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt5c07
         (610 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    23   2.0  
DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory pro...    22   4.6  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    22   4.6  
DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory pro...    21   6.1  
DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory pro...    21   6.1  

>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
            protein.
          Length = 1156

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 10/30 (33%), Positives = 19/30 (63%), Gaps = 2/30 (6%)
 Frame = -2

Query: 552  IYPLT--RKPSRTASSATCLNLLRPSSTEQ 469
            + PLT  R+P+ T + + C N   P+S+++
Sbjct: 913  VSPLTSPRQPAETHAGSPCRNSASPASSDR 942


>DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory
           protein 14 protein.
          Length = 126

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +2

Query: 512 DEAVRDGLRVRGYISCVVG 568
           DE +++    R YI C++G
Sbjct: 31  DEILKNDRLTRNYIDCILG 49


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = +2

Query: 107 NFLQRSLSTVAPEIRIYEVGPRDGLQN 187
           N+  + L   + E+ I +VGP DG ++
Sbjct: 172 NYDSKYLVLPSGELHIRDVGPEDGYKS 198


>DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory
           protein 16 protein.
          Length = 126

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +2

Query: 512 DEAVRDGLRVRGYISCVVG 568
           DE +++    R Y+ CV+G
Sbjct: 31  DEILKNDRLTRNYLDCVLG 49


>DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory
           protein 9 protein.
          Length = 126

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +2

Query: 512 DEAVRDGLRVRGYISCVVG 568
           DE +++    R Y+ CV+G
Sbjct: 31  DEILKNDRLTRNYLDCVLG 49


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,699
Number of Sequences: 336
Number of extensions: 3105
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15457268
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)