Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt5c06
(637 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF106592-2|AAK21364.1| 170|Caenorhabditis elegans Ferritin prot... 63 2e-10
AF016447-16|AAG24016.1| 170|Caenorhabditis elegans Ferritin pro... 52 3e-07
U10402-8|AAA19070.2| 1024|Caenorhabditis elegans Hypothetical pr... 31 0.52
AC024776-1|AAK68468.1| 338|Caenorhabditis elegans Hypothetical ... 31 0.69
Z78415-7|CAH60759.1| 844|Caenorhabditis elegans Hypothetical pr... 29 2.1
Z78415-5|CAB01670.1| 925|Caenorhabditis elegans Hypothetical pr... 29 2.1
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 28 4.9
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 27 8.5
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 27 8.5
AF000261-10|AAB52930.1| 639|Caenorhabditis elegans Hypothetical... 27 8.5
>AF106592-2|AAK21364.1| 170|Caenorhabditis elegans Ferritin protein
2 protein.
Length = 170
Score = 62.9 bits (146), Expect = 2e-10
Identities = 41/105 (39%), Positives = 54/105 (51%)
Frame = +1
Query: 316 MRKQIQEEVAASIQYLAMGAYFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLLMRGKL 495
+ KQI E+ AS YL+M YF D V P AK F + + EEREHAT+L+ +RG
Sbjct: 16 VNKQINIELYASYVYLSMSFYFDRDDVALPNIAKFFKEQSDEEREHATELMRVQNLRG-- 73
Query: 496 TGSVTDLITYRAPANTSWESGASALEHALKLESDVTNSIREVIKT 630
G V L + P N W + A E AL LE S+ ++ T
Sbjct: 74 -GRVV-LQDIQKPENDEWGTALKAFEAALALEKFNNESLLKLHST 116
>AF016447-16|AAG24016.1| 170|Caenorhabditis elegans Ferritin
protein 1 protein.
Length = 170
Score = 52.4 bits (120), Expect = 3e-07
Identities = 34/92 (36%), Positives = 47/92 (51%)
Frame = +1
Query: 316 MRKQIQEEVAASIQYLAMGAYFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLLMRGKL 495
+ KQI E+ AS YL+M A+F D + AK F + + EER HAT+L+ +RG
Sbjct: 16 VNKQINVELYASYVYLSMSAHFDRDDIALRNIAKFFKEQSDEERGHATELMRIQAVRG-- 73
Query: 496 TGSVTDLITYRAPANTSWESGASALEHALKLE 591
G V + + P W + A E AL LE
Sbjct: 74 -GRVA-MQNIQKPEKDEWGTVLEAFEAALALE 103
>U10402-8|AAA19070.2| 1024|Caenorhabditis elegans Hypothetical protein
C34E10.8 protein.
Length = 1024
Score = 31.5 bits (68), Expect = 0.52
Identities = 26/76 (34%), Positives = 34/76 (44%)
Frame = +2
Query: 407 ASRSYSSMLRLKNASTRPSSLTTCS*GES*QAP*PTSSRTGPPQTRRGRAAHQPSSTPSS 586
AS S SS L + +T SS T S GE S P + +P + SS
Sbjct: 861 ASESTSSEATLIHDTTSSSSAETVS-GEPPAKKSSDVSAPVPSPEKEKEKIDRPKTPKSS 919
Query: 587 WRVTSPTASGRSSRPA 634
+ T+PT SGR+ R A
Sbjct: 920 TKRTTPTPSGRTPRAA 935
>AC024776-1|AAK68468.1| 338|Caenorhabditis elegans Hypothetical
protein Y41D4B.18 protein.
Length = 338
Score = 31.1 bits (67), Expect = 0.69
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = +2
Query: 509 PTSSRTGPPQTRRGRAAHQP-SSTPSSWRVTSPTASGRSSRP 631
PT+S T PP + + QP SS+ SS +PT +SRP
Sbjct: 258 PTNSTTNPPTATSPKTSSQPVSSSTSSTSSPAPTNPPTTSRP 299
>Z78415-7|CAH60759.1| 844|Caenorhabditis elegans Hypothetical
protein C17G1.4b protein.
Length = 844
Score = 29.5 bits (63), Expect = 2.1
Identities = 14/43 (32%), Positives = 25/43 (58%)
Frame = +2
Query: 509 PTSSRTGPPQTRRGRAAHQPSSTPSSWRVTSPTASGRSSRPAR 637
P+ + GPP R ++ H P +P ++ + P+ SGR +PA+
Sbjct: 647 PSQTSHGPPLLSRSQSMHTPMISP-NFNASQPSTSGR--QPAK 686
>Z78415-5|CAB01670.1| 925|Caenorhabditis elegans Hypothetical
protein C17G1.4a protein.
Length = 925
Score = 29.5 bits (63), Expect = 2.1
Identities = 14/43 (32%), Positives = 25/43 (58%)
Frame = +2
Query: 509 PTSSRTGPPQTRRGRAAHQPSSTPSSWRVTSPTASGRSSRPAR 637
P+ + GPP R ++ H P +P ++ + P+ SGR +PA+
Sbjct: 647 PSQTSHGPPLLSRSQSMHTPMISP-NFNASQPSTSGR--QPAK 686
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical protein
K06A9.1b protein.
Length = 2232
Score = 28.3 bits (60), Expect = 4.9
Identities = 19/58 (32%), Positives = 26/58 (44%)
Frame = +2
Query: 449 STRPSSLTTCS*GES*QAP*PTSSRTGPPQTRRGRAAHQPSSTPSSWRVTSPTASGRS 622
ST S T E +P P++S+ P T G + + TP S + TSP S S
Sbjct: 950 STSSGSTVTVGSTEGSSSPIPSTSQNTNPSTSSGSS--MSTQTPQSSQSTSPVESSTS 1005
>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 27.5 bits (58), Expect = 8.5
Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Frame = +2
Query: 398 TAPASRSYSSMLRLKNASTRPSS-LTTCS*GES*QAP*PTSSRTGPPQTRRGRAAHQPSS 574
++ +S + ++ ++ ST PSS +TT + S P+SS + P T + SS
Sbjct: 465 SSSSSTTVTTPTSTESTSTSPSSTVTTSTTAPSTSTTGPSSSSSTPSSTASSSVSSTASS 524
Query: 575 TPSSWRVTSPTASGRS 622
T SS + + +S
Sbjct: 525 TQSSTSTQQSSTTTKS 540
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 27.5 bits (58), Expect = 8.5
Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Frame = +2
Query: 398 TAPASRSYSSMLRLKNASTRPSS-LTTCS*GES*QAP*PTSSRTGPPQTRRGRAAHQPSS 574
++ +S + ++ ++ ST PSS +TT + S P+SS + P T + SS
Sbjct: 465 SSSSSTTVTTPTSTESTSTSPSSTVTTSTTAPSTSTTGPSSSSSTPSSTASSSVSSTASS 524
Query: 575 TPSSWRVTSPTASGRS 622
T SS + + +S
Sbjct: 525 TQSSTSTQQSSTTTKS 540
>AF000261-10|AAB52930.1| 639|Caenorhabditis elegans Hypothetical
protein F19B10.10 protein.
Length = 639
Score = 27.5 bits (58), Expect = 8.5
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = -2
Query: 174 SYNHRFFDDTQKNMRS*KQ*LYKSSLY 94
SYNHRFF K++ S K+ LYK+ ++
Sbjct: 99 SYNHRFF--IHKDISSDKKFLYKNDIF 123
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,043,669
Number of Sequences: 27780
Number of extensions: 262652
Number of successful extensions: 842
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 786
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 840
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1406256614
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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