Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt5c05
         (625 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical prote...    26   0.85 
AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical prote...    26   0.85 
X95912-1|CAA65156.1|  696|Anopheles gambiae immune factor protein.     24   3.4  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           24   3.4  

>AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 26.2 bits (55), Expect = 0.85
 Identities = 29/89 (32%), Positives = 36/89 (40%)
 Frame = +3

Query: 63  LFNSDIIFKMALKSSPAVLGMLTRLSRRSFATSKALASKPVTVRDALNQAIDEEMERDEK 242
           LF    I   A K+S  ++G  T+  RR     K   S     R+ L     E  ER   
Sbjct: 522 LFAGTKILSYAEKASTNLVGKFTQSVRRIVQDVKDEGSPGGMSREELL----ETNERLRA 577

Query: 243 VFVLGEEVAQYDGAYKVTRGLWKKYGDKR 329
           V +  EE   YD A K    L  KYGD +
Sbjct: 578 VRLRLEE--SYDTAKKALVNLMNKYGDSK 604


>AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 26.2 bits (55), Expect = 0.85
 Identities = 29/89 (32%), Positives = 36/89 (40%)
 Frame = +3

Query: 63  LFNSDIIFKMALKSSPAVLGMLTRLSRRSFATSKALASKPVTVRDALNQAIDEEMERDEK 242
           LF    I   A K+S  ++G  T+  RR     K   S     R+ L     E  ER   
Sbjct: 522 LFAGTKILSYAEKASTNLVGKFTQSVRRIVQDVKDEGSPGGMSREELL----ETNERLRA 577

Query: 243 VFVLGEEVAQYDGAYKVTRGLWKKYGDKR 329
           V +  EE   YD A K    L  KYGD +
Sbjct: 578 VRLRLEE--SYDTAKKALVNLMNKYGDSK 604


>X95912-1|CAA65156.1|  696|Anopheles gambiae immune factor protein.
          Length = 696

 Score = 24.2 bits (50), Expect = 3.4
 Identities = 9/33 (27%), Positives = 15/33 (45%)
 Frame = -1

Query: 589 WLYQAPKHWECCAATPEAAPLGPRNTIGTGTVP 491
           W+   P H +   + P+     P N +  GT+P
Sbjct: 523 WVQPVPSHTQNGPSQPQPQQQNPFNLLNFGTLP 555


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 24.2 bits (50), Expect = 3.4
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -1

Query: 562  ECCAATPEAAPLGPRNTIGTGTV 494
            EC A+T E AP  P N+  + +V
Sbjct: 1304 ECSASTSEPAPAAPSNSTPSRSV 1326


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 654,116
Number of Sequences: 2352
Number of extensions: 12559
Number of successful extensions: 68
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 67
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 68
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 60632475
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)