Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt5c04
         (591 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    27   0.090
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     23   2.6  
AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esteras...    21   5.9  
AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esteras...    21   5.9  
AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.      21   5.9  
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      21   5.9  

>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 27.5 bits (58), Expect = 0.090
 Identities = 14/47 (29%), Positives = 19/47 (40%), Gaps = 3/47 (6%)
 Frame = +3

Query: 312 ITSSYYRGAHGIIIVYDCTDQDSF---SNVKQWLEEIDRYACDNVNK 443
           +   YYR  HG    + C     F   SN+  W E  DR  C  + +
Sbjct: 487 LCDKYYRCVHGKPTEFACRPGTVFHTQSNICDWPEHADREKCKKIEQ 533


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 11/21 (52%), Positives = 12/21 (57%)
 Frame = +3

Query: 186 DTYTESYISTIGVDFKIRTVD 248
           D +T S IST G DF    VD
Sbjct: 299 DNHTLSVISTDGSDFNATEVD 319


>AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esterase
           protein.
          Length = 515

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = -3

Query: 565 FVEFFADVSRNGMPS 521
           FV+F+ + +RNG P+
Sbjct: 452 FVKFWTNFARNGSPN 466


>AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esterase
           protein.
          Length = 517

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = -3

Query: 565 FVEFFADVSRNGMPS 521
           FV+F+ + +RNG P+
Sbjct: 454 FVKFWTNFARNGSPN 468


>AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.
          Length = 515

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = -3

Query: 565 FVEFFADVSRNGMPS 521
           FV+F+ + +RNG P+
Sbjct: 452 FVKFWTNFARNGSPN 466


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = -3

Query: 565 FVEFFADVSRNGMPS 521
           FV+F+ + +RNG P+
Sbjct: 454 FVKFWTNFARNGSPN 468


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,818
Number of Sequences: 336
Number of extensions: 2549
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14830622
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)