Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt5b24
         (639 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U37429-15|AAN63412.1|  195|Caenorhabditis elegans Peroxiredoxin ...   301   2e-82
Z32683-2|CAA83619.1|  226|Caenorhabditis elegans Hypothetical pr...   259   1e-69
AC024761-15|AAM97968.1|  231|Caenorhabditis elegans Hypothetical...    72   4e-13
Z46935-4|CAA87051.1|  270|Caenorhabditis elegans Hypothetical pr...    29   2.1  
Z18854-1|CAA79306.1|  270|Caenorhabditis elegans capping protein...    29   2.1  
Z18806-1|CAA79270.1|  270|Caenorhabditis elegans capping protein...    29   2.1  
Z81070-10|CAB03004.1|  163|Caenorhabditis elegans Hypothetical p...    29   2.8  
Z82095-7|CAN86628.1|  390|Caenorhabditis elegans Hypothetical pr...    29   3.7  
Z82095-6|CAI79281.2|  412|Caenorhabditis elegans Hypothetical pr...    29   3.7  
Z82095-5|CAB05026.2|  414|Caenorhabditis elegans Hypothetical pr...    29   3.7  
Z70780-2|CAA94821.1|  468|Caenorhabditis elegans Hypothetical pr...    28   4.9  
AL008868-3|CAH04724.1|  362|Caenorhabditis elegans Hypothetical ...    28   4.9  
AL008868-2|CAA15513.1|  365|Caenorhabditis elegans Hypothetical ...    28   4.9  
AF039041-8|AAB94189.2|  448|Caenorhabditis elegans Hypothetical ...    27   8.6  
AF003135-7|AAK18991.1|  254|Caenorhabditis elegans Hypothetical ...    27   8.6  
AF003135-6|AAK18988.2|  288|Caenorhabditis elegans Hypothetical ...    27   8.6  

>U37429-15|AAN63412.1|  195|Caenorhabditis elegans Peroxiredoxin
           protein 2 protein.
          Length = 195

 Score =  301 bits (740), Expect = 2e-82
 Identities = 138/176 (78%), Positives = 154/176 (87%)
 Frame = +3

Query: 105 KPAPQFKATAVVNGEFKDISLSDYKGKYVVLFFYPLDFTFVCPTEIIAFSEKADEFRKIG 284
           KPAPQFK  AVV+GEF D+SLSDYKGKYVVLFFYPLDFTFVCPTEIIAFS++A+EF+ I 
Sbjct: 8   KPAPQFKTQAVVDGEFVDVSLSDYKGKYVVLFFYPLDFTFVCPTEIIAFSDRAEEFKAIN 67

Query: 285 CEVLGASTDSHFTHLAWINTPRKQGGLGPMNIPLISDKSHRISRDYGVLDEETGIPFRGL 464
             VL ASTDS F+HLAWIN PRK GGLG MNIP+++D +H+ISRDYGVL E+ GI FRGL
Sbjct: 68  TVVLAASTDSVFSHLAWINQPRKHGGLGEMNIPVLADTNHQISRDYGVLKEDEGIAFRGL 127

Query: 465 FIIDDKQNLRQITINDLPVGRSVEETLRLVQAFQFTDKHGEVCPANWRPGAKTIKP 632
           FIID  QNLRQITINDLPVGRSV+ETLRLVQAFQF +KHGEVCPA W PG+ TIKP
Sbjct: 128 FIIDPSQNLRQITINDLPVGRSVDETLRLVQAFQFVEKHGEVCPAGWTPGSDTIKP 183


>Z32683-2|CAA83619.1|  226|Caenorhabditis elegans Hypothetical
           protein R07E5.2 protein.
          Length = 226

 Score =  259 bits (634), Expect = 1e-69
 Identities = 113/181 (62%), Positives = 146/181 (80%)
 Frame = +3

Query: 90  PLQMTKPAPQFKATAVVNGEFKDISLSDYKGKYVVLFFYPLDFTFVCPTEIIAFSEKADE 269
           PL      P FK TAVV+G+FK IS  DYKGK++V+FFYPLDFTFVCPTEIIA+ ++A+E
Sbjct: 32  PLGPKNTVPAFKGTAVVDGDFKVISDQDYKGKWLVMFFYPLDFTFVCPTEIIAYGDRANE 91

Query: 270 FRKIGCEVLGASTDSHFTHLAWINTPRKQGGLGPMNIPLISDKSHRISRDYGVLDEETGI 449
           FR +G EV+  S DSHF+HLAW+NTPRK GGLG M+IPL++D + +I+  +GVLD+E+G+
Sbjct: 92  FRSLGAEVVACSCDSHFSHLAWVNTPRKDGGLGDMDIPLLADFNKKIADSFGVLDKESGL 151

Query: 450 PFRGLFIIDDKQNLRQITINDLPVGRSVEETLRLVQAFQFTDKHGEVCPANWRPGAKTIK 629
            +RGLF+ID    +R  T NDLPVGRSV+ETLR+++AFQF+DKHGEVCPA+W   + TIK
Sbjct: 152 SYRGLFLIDPSGTVRHTTCNDLPVGRSVDETLRVLKAFQFSDKHGEVCPADWHEDSPTIK 211

Query: 630 P 632
           P
Sbjct: 212 P 212


>AC024761-15|AAM97968.1|  231|Caenorhabditis elegans Hypothetical
           protein Y38C1AA.11 protein.
          Length = 231

 Score = 71.7 bits (168), Expect = 4e-13
 Identities = 51/169 (30%), Positives = 79/169 (46%), Gaps = 11/169 (6%)
 Frame = +3

Query: 153 KDISLSDYKGK-YVVLFFYPLDFTFVCPTEIIAFSEKADEFRKIGCEVLGASTDSHFTHL 329
           K+ +L +Y G+ +++LF +P DFT VC TE+    + A EFRK   ++L  S DS  TH 
Sbjct: 18  KNQTLHNYIGEQWLMLFSHPADFTPVCTTELAELVKLAPEFRKRHVQILAISIDSSETHR 77

Query: 330 AW---INTPRKQGGLGP-MNIPLISDKSHRISRDYGVLD------EETGIPFRGLFIIDD 479
            W   IN+  +    G  +   +I+D    I  + G++D      E   +  R + +   
Sbjct: 78  DWAKDINSVAQLSNCGSHLPFEIIADTDRSICTELGMIDPDEMNSEGICLSARAVMLFGP 137

Query: 480 KQNLRQITINDLPVGRSVEETLRLVQAFQFTDKHGEVCPANWRPGAKTI 626
            + L+   +     GR+  E LR+V   Q   K     PANW  G   I
Sbjct: 138 DKKLKSKILYPATFGRNFVEILRMVDGVQLGTKAPVATPANWIAGDNVI 186


>Z46935-4|CAA87051.1|  270|Caenorhabditis elegans Hypothetical
           protein M106.5 protein.
          Length = 270

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 22/90 (24%), Positives = 44/90 (48%)
 Frame = +3

Query: 321 THLAWINTPRKQGGLGPMNIPLISDKSHRISRDYGVLDEETGIPFRGLFIIDDKQNLRQI 500
           T + W+ T +   G+  MN+     + H +  D  + D+ T +   G  I D +  +R +
Sbjct: 171 TIMLWLQTNKSSSGV--MNLGGSLTRQHEM--DAPINDQNTHLANMGRMIEDQESKMR-L 225

Query: 501 TINDLPVGRSVEETLRLVQAFQFTDKHGEV 590
           TIN++  G+    T +++   + T+K  E+
Sbjct: 226 TINEIYFGK----TKKVMSDLRSTEKQSEL 251


>Z18854-1|CAA79306.1|  270|Caenorhabditis elegans capping protein
           beta subunit protein.
          Length = 270

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 22/90 (24%), Positives = 44/90 (48%)
 Frame = +3

Query: 321 THLAWINTPRKQGGLGPMNIPLISDKSHRISRDYGVLDEETGIPFRGLFIIDDKQNLRQI 500
           T + W+ T +   G+  MN+     + H +  D  + D+ T +   G  I D +  +R +
Sbjct: 171 TIMLWLQTNKSSSGV--MNLGGSLTRQHEM--DAPINDQNTHLANMGRMIEDQESKMR-L 225

Query: 501 TINDLPVGRSVEETLRLVQAFQFTDKHGEV 590
           TIN++  G+    T +++   + T+K  E+
Sbjct: 226 TINEIYFGK----TKKVMSDLRSTEKQSEL 251


>Z18806-1|CAA79270.1|  270|Caenorhabditis elegans capping protein
           beta subunit protein.
          Length = 270

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 22/90 (24%), Positives = 44/90 (48%)
 Frame = +3

Query: 321 THLAWINTPRKQGGLGPMNIPLISDKSHRISRDYGVLDEETGIPFRGLFIIDDKQNLRQI 500
           T + W+ T +   G+  MN+     + H +  D  + D+ T +   G  I D +  +R +
Sbjct: 171 TIMLWLQTNKSSSGV--MNLGGSLTRQHEM--DAPINDQNTHLANMGRMIEDQESKMR-L 225

Query: 501 TINDLPVGRSVEETLRLVQAFQFTDKHGEV 590
           TIN++  G+    T +++   + T+K  E+
Sbjct: 226 TINEIYFGK----TKKVMSDLRSTEKQSEL 251


>Z81070-10|CAB03004.1|  163|Caenorhabditis elegans Hypothetical
           protein F26E4.12 protein.
          Length = 163

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 19/54 (35%), Positives = 25/54 (46%)
 Frame = +3

Query: 135 VVNGEFKDISLSDYKGKYVVLFFYPLDFTFVCPTEIIAFSEKADEFRKIGCEVL 296
           V N    D+SLSDYKGK V++         +         E  D ++K G EVL
Sbjct: 9   VKNANGDDVSLSDYKGK-VLIIVNVASQCGLTNKNYTQLKELLDVYKKDGLEVL 61


>Z82095-7|CAN86628.1|  390|Caenorhabditis elegans Hypothetical
           protein ZK849.2c protein.
          Length = 390

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = -2

Query: 518 GQVVDGDLPEVLLVVDDEESSEGDARLLVQHS 423
           GQV  GDL   L+ V  +E S+ D  + ++HS
Sbjct: 331 GQVQQGDLDLELVFVCPDEDSDDDGTVTIEHS 362


>Z82095-6|CAI79281.2|  412|Caenorhabditis elegans Hypothetical
           protein ZK849.2b protein.
          Length = 412

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = -2

Query: 518 GQVVDGDLPEVLLVVDDEESSEGDARLLVQHS 423
           GQV  GDL   L+ V  +E S+ D  + ++HS
Sbjct: 353 GQVQQGDLDLELVFVCPDEDSDDDGTVTIEHS 384


>Z82095-5|CAB05026.2|  414|Caenorhabditis elegans Hypothetical
           protein ZK849.2a protein.
          Length = 414

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = -2

Query: 518 GQVVDGDLPEVLLVVDDEESSEGDARLLVQHS 423
           GQV  GDL   L+ V  +E S+ D  + ++HS
Sbjct: 355 GQVQQGDLDLELVFVCPDEDSDDDGTVTIEHS 386


>Z70780-2|CAA94821.1|  468|Caenorhabditis elegans Hypothetical
           protein F46B6.4 protein.
          Length = 468

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = -2

Query: 563 ERLHQPQGLLHRPPHGQVVDGDLPEVL 483
           +RLH    +LH   H   +DGDL E+L
Sbjct: 179 KRLHSRPDILHIDSHYSDIDGDLNEIL 205


>AL008868-3|CAH04724.1|  362|Caenorhabditis elegans Hypothetical
           protein C53C7.1b protein.
          Length = 362

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
 Frame = +3

Query: 483 QNLRQITIND-LPVGRSVEETLRLVQAFQFTDKHGEVCPANWRPGA 617
           Q L+ I+ N  + VG SV   ++  +  QF +  GE C  NW P A
Sbjct: 142 QALKMISFNSAISVGLSVPLFMKQ-ELMQFRNYCGEYCSENWGPDA 186


>AL008868-2|CAA15513.1|  365|Caenorhabditis elegans Hypothetical
           protein C53C7.1a protein.
          Length = 365

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
 Frame = +3

Query: 483 QNLRQITIND-LPVGRSVEETLRLVQAFQFTDKHGEVCPANWRPGA 617
           Q L+ I+ N  + VG SV   ++  +  QF +  GE C  NW P A
Sbjct: 142 QALKMISFNSAISVGLSVPLFMKQ-ELMQFRNYCGEYCSENWGPDA 186


>AF039041-8|AAB94189.2|  448|Caenorhabditis elegans Hypothetical
           protein W03F8.2 protein.
          Length = 448

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
 Frame = +3

Query: 474 DDKQNLRQITINDLPVGRSVEETLRL-VQAFQFTDKHGEVCPANWRPGAKTIK 629
           DDK+ + +   N+ PV   VEE + + V+A Q TD   E+     +P  K  K
Sbjct: 94  DDKKEVEEKKENEKPVDVKVEEKVMVKVEATQNTDNSQELKAPEEKPKKKKKK 146


>AF003135-7|AAK18991.1|  254|Caenorhabditis elegans Hypothetical
           protein W03F11.5b protein.
          Length = 254

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 19/72 (26%), Positives = 34/72 (47%)
 Frame = -2

Query: 572 RELERLHQPQGLLHRPPHGQVVDGDLPEVLLVVDDEESSEGDARLLVQHSVVAGDAVRLV 393
           + L  +  P  L  RP + Q+ DG+  + + +VDD +    +  + V+ S +  D+ R  
Sbjct: 79  KTLAGIQMPFSLTGRPMNLQI-DGESHDAVSLVDDPKKRNNEKSMEVRRSDMTPDSRRAF 137

Query: 392 AYQRDVHGTESA 357
              R V   +SA
Sbjct: 138 LRARQVCLEQSA 149


>AF003135-6|AAK18988.2|  288|Caenorhabditis elegans Hypothetical
           protein W03F11.5a protein.
          Length = 288

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 19/72 (26%), Positives = 34/72 (47%)
 Frame = -2

Query: 572 RELERLHQPQGLLHRPPHGQVVDGDLPEVLLVVDDEESSEGDARLLVQHSVVAGDAVRLV 393
           + L  +  P  L  RP + Q+ DG+  + + +VDD +    +  + V+ S +  D+ R  
Sbjct: 113 KTLAGIQMPFSLTGRPMNLQI-DGESHDAVSLVDDPKKRNNEKSMEVRRSDMTPDSRRAF 171

Query: 392 AYQRDVHGTESA 357
              R V   +SA
Sbjct: 172 LRARQVCLEQSA 183


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,538,452
Number of Sequences: 27780
Number of extensions: 262694
Number of successful extensions: 1077
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1001
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1064
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1416829972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)