Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt5b19
         (539 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    23   1.3  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    23   1.3  
EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    23   1.7  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    23   2.3  
AF265299-1|AAG17642.1|   63|Tribolium castaneum putative cytochr...    23   2.3  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   6.9  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    21   9.2  

>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 23.4 bits (48), Expect = 1.3
 Identities = 6/17 (35%), Positives = 14/17 (82%)
 Frame = -1

Query: 341 EFSYSNLVALRYLKLLV 291
           EF+Y N++ ++YL +++
Sbjct: 337 EFTYENILGMKYLDMVI 353


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 23.4 bits (48), Expect = 1.3
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = -2

Query: 127 YLIINYFGSTCSR*RLNYIIYNNSRC 50
           YL+I       S  R NY++ NNS C
Sbjct: 377 YLVIFIQFDQSSNSRNNYVLTNNSTC 402


>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 23.0 bits (47), Expect = 1.7
 Identities = 12/51 (23%), Positives = 25/51 (49%)
 Frame = -2

Query: 157 CCNNSFGTHRYLIINYFGSTCSR*RLNYIIYNNSRCCNNSFGTHRYLIINY 5
           C +N+   H  +   Y GS+       Y++    R  + +F  H++L++N+
Sbjct: 261 CNSNNIWLH--VDAAYAGSSFICPEFRYLMKGIDRADSFNFNPHKWLLVNF 309



 Score = 21.8 bits (44), Expect = 4.0
 Identities = 10/40 (25%), Positives = 21/40 (52%)
 Frame = -2

Query: 217 YFGSTCSR*RLNWIIYNHSRCCNNSFGTHRYLIINYFGST 98
           Y GS+       +++    R  + +F  H++L++N+  ST
Sbjct: 274 YAGSSFICPEFRYLMKGIDRADSFNFNPHKWLLVNFDCST 313


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +2

Query: 350 AVPEAVIVTAPEAETAITTGSPTVD 424
           +VPE  I T P  E A    +P+ D
Sbjct: 398 SVPEPTISTTPRPEWARPPSTPSAD 422


>AF265299-1|AAG17642.1|   63|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 63

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 9/21 (42%), Positives = 16/21 (76%)
 Frame = -1

Query: 335 SYSNLVALRYLKLLVQPQPRL 273
           SYS+L  ++YL+L+++   RL
Sbjct: 39  SYSDLQEMKYLELVIKEALRL 59


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.0 bits (42), Expect = 6.9
 Identities = 6/10 (60%), Positives = 7/10 (70%)
 Frame = -2

Query: 175 IYNHSRCCNN 146
           IYN  +CC N
Sbjct: 791 IYNEKQCCKN 800



 Score = 21.0 bits (42), Expect = 6.9
 Identities = 6/10 (60%), Positives = 7/10 (70%)
 Frame = -2

Query: 70  IYNNSRCCNN 41
           IYN  +CC N
Sbjct: 791 IYNEKQCCKN 800


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 20.6 bits (41), Expect = 9.2
 Identities = 9/24 (37%), Positives = 11/24 (45%)
 Frame = -2

Query: 376 CYNYSFRYSICENFRTQILWRFGI 305
           C N S  Y IC    + IL+   I
Sbjct: 40  CLNLSINYCICGYIFSAILFSLSI 63


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,239
Number of Sequences: 336
Number of extensions: 2167
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13201902
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)