Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt5b19
(539 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ007394-1|CAA07489.1| 112|Anopheles gambiae mucin protein. 31 0.025
AF457553-1|AAL68783.1| 178|Anopheles gambiae mucin-like protein... 29 0.075
AF046924-1|AAC08530.1| 122|Anopheles gambiae mucin protein. 28 0.17
AY344832-1|AAR05803.1| 333|Anopheles gambiae ICHIT protein. 26 0.93
AY344831-1|AAR05802.1| 333|Anopheles gambiae ICHIT protein. 26 0.93
AY344835-1|AAR05806.1| 334|Anopheles gambiae ICHIT protein. 25 2.1
AY344834-1|AAR05805.1| 334|Anopheles gambiae ICHIT protein. 25 2.1
AY344833-1|AAR05804.1| 334|Anopheles gambiae ICHIT protein. 25 2.1
AY344830-1|AAR05801.1| 334|Anopheles gambiae ICHIT protein. 25 2.1
AY344829-1|AAR05800.1| 334|Anopheles gambiae ICHIT protein. 25 2.1
AJ010903-1|CAA09389.1| 373|Anopheles gambiae ICHIT protein prot... 24 3.7
AJ697722-1|CAG26915.1| 119|Anopheles gambiae putative odorant-b... 23 6.5
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript... 23 6.5
>AJ007394-1|CAA07489.1| 112|Anopheles gambiae mucin protein.
Length = 112
Score = 31.1 bits (67), Expect = 0.025
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
Frame = -3
Query: 219 ITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSL--ITSVALAPVEDSITSFTTTAGAA 46
+TS + P ++ TTT T + PT T+++ T+ +AP + T+ TT A
Sbjct: 17 VTSGQIDPPTTTVAPATTTVAPTTTTVAPTTTTTVAPTTTTTVAPGQ---TTTTTVASGP 73
Query: 45 TIVLEPTDTSS 13
TDT++
Sbjct: 74 VTTTGSTDTTT 84
Score = 27.9 bits (59), Expect = 0.23
Identities = 16/56 (28%), Positives = 26/56 (46%)
Frame = -3
Query: 213 SVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAA 46
+ +AP ++ TTT A T + T+VA PV + ++ TTT +A
Sbjct: 33 TTTVAPTTTTVAPTTTTTVAPTTTTTVAPGQTTTTTVASGPVTTTGSTDTTTPSSA 88
Score = 23.8 bits (49), Expect = 3.7
Identities = 10/35 (28%), Positives = 18/35 (51%)
Frame = -3
Query: 114 ITSVALAPVEDSITSFTTTAGAATIVLEPTDTSSL 10
+TS + P ++ TTT T + PT T+++
Sbjct: 17 VTSGQIDPPTTTVAPATTTVAPTTTTVAPTTTTTV 51
>AF457553-1|AAL68783.1| 178|Anopheles gambiae mucin-like protein
protein.
Length = 178
Score = 29.5 bits (63), Expect = 0.075
Identities = 22/73 (30%), Positives = 29/73 (39%), Gaps = 3/73 (4%)
Frame = -3
Query: 222 LITSVALAPVEDSIGSFTTTAGAATIVLEPTD---TSSLITSVALAPVEDSITSFTTTAG 52
L +A ++ G T AAT T TS T+ A + + S + TTT
Sbjct: 47 LRAQIAQQRIQQRYGVTVATTSAATTTAATTSAATTSEATTTAAASTTQASDSDNTTTTA 106
Query: 51 AATIVLEPTDTSS 13
AT E TSS
Sbjct: 107 EATTTTEAQTTSS 119
Score = 25.4 bits (53), Expect = 1.2
Identities = 17/62 (27%), Positives = 25/62 (40%)
Frame = -3
Query: 228 SSLITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGA 49
S T+ A + + S TTT AT E TSS S + + TTA +
Sbjct: 83 SEATTTAAASTTQASDSDNTTTTAEATTTTEAQTTSSSDNSTTTEAAATTTAASETTADS 142
Query: 48 AT 43
++
Sbjct: 143 SS 144
>AF046924-1|AAC08530.1| 122|Anopheles gambiae mucin protein.
Length = 122
Score = 28.3 bits (60), Expect = 0.17
Identities = 14/59 (23%), Positives = 24/59 (40%)
Frame = -3
Query: 219 ITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAAT 43
+TS + P ++ TTT T + PT T+++ + T+ T G T
Sbjct: 17 VTSGQIDPPTTTVAPATTTVAPTTTTVAPTTTTTVAPTTTTTVAPGQTTTTTVAPGQTT 75
Score = 23.8 bits (49), Expect = 3.7
Identities = 10/35 (28%), Positives = 18/35 (51%)
Frame = -3
Query: 114 ITSVALAPVEDSITSFTTTAGAATIVLEPTDTSSL 10
+TS + P ++ TTT T + PT T+++
Sbjct: 17 VTSGQIDPPTTTVAPATTTVAPTTTTVAPTTTTTV 51
>AY344832-1|AAR05803.1| 333|Anopheles gambiae ICHIT protein.
Length = 333
Score = 25.8 bits (54), Expect = 0.93
Identities = 19/57 (33%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
Frame = -3
Query: 171 TTTAGAATIVLEPTDTSS-LITSVALAPVEDSITSFTTTAGAATIVLEPTDTSSLIT 4
TTT AT L PT T++ IT+ + TTT A T + TD + T
Sbjct: 98 TTTLRPATTTLRPTTTTTDWITTTTTEATTTTRFPTTTTTSAPTTPSQWTDPTITTT 154
>AY344831-1|AAR05802.1| 333|Anopheles gambiae ICHIT protein.
Length = 333
Score = 25.8 bits (54), Expect = 0.93
Identities = 19/57 (33%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
Frame = -3
Query: 171 TTTAGAATIVLEPTDTSS-LITSVALAPVEDSITSFTTTAGAATIVLEPTDTSSLIT 4
TTT AT L PT T++ IT+ + TTT A T + TD + T
Sbjct: 98 TTTLRPATTTLRPTTTTTDWITTTTTEATTTTRFPTTTTTSAPTTPSQWTDPTITTT 154
>AY344835-1|AAR05806.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 24.6 bits (51), Expect = 2.1
Identities = 18/58 (31%), Positives = 24/58 (41%), Gaps = 2/58 (3%)
Frame = -3
Query: 171 TTTAGAATIVLEPTDTSSL--ITSVALAPVEDSITSFTTTAGAATIVLEPTDTSSLIT 4
TTT T L PT T++ IT+ + TTT A T + TD + T
Sbjct: 98 TTTLRPTTTTLRPTTTTTTDWITTTTTEATTTTTFPTTTTTSAPTTPSQWTDPTITTT 155
>AY344834-1|AAR05805.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 24.6 bits (51), Expect = 2.1
Identities = 18/58 (31%), Positives = 24/58 (41%), Gaps = 2/58 (3%)
Frame = -3
Query: 171 TTTAGAATIVLEPTDTSSL--ITSVALAPVEDSITSFTTTAGAATIVLEPTDTSSLIT 4
TTT T L PT T++ IT+ + TTT A T + TD + T
Sbjct: 98 TTTLRPTTTTLRPTTTTTTDWITTTTTEATTTTTFPTTTTTSAPTTPSQWTDPTITTT 155
>AY344833-1|AAR05804.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 24.6 bits (51), Expect = 2.1
Identities = 18/58 (31%), Positives = 24/58 (41%), Gaps = 2/58 (3%)
Frame = -3
Query: 171 TTTAGAATIVLEPTDTSSL--ITSVALAPVEDSITSFTTTAGAATIVLEPTDTSSLIT 4
TTT T L PT T++ IT+ + TTT A T + TD + T
Sbjct: 98 TTTLRPTTTTLRPTTTTTTDWITTTTTEATTTTTFPTTTTTSAPTTPSQWTDPTITTT 155
>AY344830-1|AAR05801.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 24.6 bits (51), Expect = 2.1
Identities = 18/58 (31%), Positives = 24/58 (41%), Gaps = 2/58 (3%)
Frame = -3
Query: 171 TTTAGAATIVLEPTDTSSL--ITSVALAPVEDSITSFTTTAGAATIVLEPTDTSSLIT 4
TTT T L PT T++ IT+ + TTT A T + TD + T
Sbjct: 98 TTTLRPTTTTLRPTTTTTTDWITTTTTEATTTTTFPTTTTTSAPTTPSQWTDPTITTT 155
>AY344829-1|AAR05800.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 24.6 bits (51), Expect = 2.1
Identities = 18/58 (31%), Positives = 24/58 (41%), Gaps = 2/58 (3%)
Frame = -3
Query: 171 TTTAGAATIVLEPTDTSSL--ITSVALAPVEDSITSFTTTAGAATIVLEPTDTSSLIT 4
TTT T L PT T++ IT+ + TTT A T + TD + T
Sbjct: 98 TTTLRPTTTTLRPTTTTTTDWITTTTTEATTTTTFPTTTTTSAPTTPSQWTDPTITTT 155
>AJ010903-1|CAA09389.1| 373|Anopheles gambiae ICHIT protein
protein.
Length = 373
Score = 23.8 bits (49), Expect = 3.7
Identities = 18/58 (31%), Positives = 24/58 (41%), Gaps = 2/58 (3%)
Frame = -3
Query: 171 TTTAGAATIVLEPTDTSSL--ITSVALAPVEDSITSFTTTAGAATIVLEPTDTSSLIT 4
TTT T L PT T++ IT+ + TTT A T + TD + T
Sbjct: 98 TTTLRPTTTTLRPTTTTTTDWITTTTTEATTTTKFPTTTTTSAPTTPSQWTDPTITTT 155
>AJ697722-1|CAG26915.1| 119|Anopheles gambiae putative
odorant-binding protein OBPjj12 protein.
Length = 119
Score = 23.0 bits (47), Expect = 6.5
Identities = 16/47 (34%), Positives = 21/47 (44%)
Frame = -2
Query: 421 NCRRSCGYSSFSLWGCYNYSFRYSICENFRTQILWRFGI*NCWFSHN 281
+CR S S F N+S R S+ E F + R G N F+ N
Sbjct: 18 SCRMSLKPSVFESLRAGNFSVRNSLVECFGECFVKRAGFMNDNFTFN 64
>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 23.0 bits (47), Expect = 6.5
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = -2
Query: 295 WFSHNLGCCSGFYFNSFRAHQCLVINYFGSTCSR*RL 185
W SH + C+ + +A CL+ N+ G C++ RL
Sbjct: 764 WKSH-VEYCTTKALRTAKALGCLMRNHSGPKCAKRRL 799
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 452,337
Number of Sequences: 2352
Number of extensions: 9143
Number of successful extensions: 31
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 50320221
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -