Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt5b19
(539 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ606308-1|CAE54436.1| 4262|Homo sapiens secreted mucin MUC17 pr... 32 1.1
AJ606307-1|CAE54435.1| 4493|Homo sapiens membrane mucin MUC17 pr... 32 1.1
AF414442-1|AAL65133.2|22152|Homo sapiens ovarian cancer related ... 31 2.6
AF361486-1|AAK74120.3| 6995|Homo sapiens mucin 16 protein. 31 2.6
BC126315-1|AAI26316.1| 1224|Homo sapiens MUC17 protein protein. 30 4.5
AY113189-1|AAM77920.1| 755|Homo sapiens OCT-1 protein protein. 30 4.5
X74955-1|CAA52910.1| 622|Homo sapiens mucin protein. 30 6.0
X13403-1|CAA31767.1| 743|Homo sapiens protein ( Human mRNA for ... 29 7.9
BC052274-1|AAH52274.1| 743|Homo sapiens POU class 2 homeobox 1 ... 29 7.9
BC007388-1|AAH07388.1| 561|Homo sapiens POU2F1 protein protein. 29 7.9
BC003571-1|AAH03571.1| 743|Homo sapiens POU2F1 protein protein. 29 7.9
BC001664-1|AAH01664.1| 743|Homo sapiens POU2F1 protein protein. 29 7.9
AL136984-5|CAI15171.1| 561|Homo sapiens POU domain, class 2, tr... 29 7.9
AL136984-4|CAI15170.1| 741|Homo sapiens POU domain, class 2, tr... 29 7.9
AL136984-3|CAI15169.1| 743|Homo sapiens POU domain, class 2, tr... 29 7.9
AL136984-1|CAI15167.1| 755|Homo sapiens POU domain, class 2, tr... 29 7.9
AJ298318-1|CAC83675.1| 1349|Homo sapiens mucin 5 protein. 29 7.9
>AJ606308-1|CAE54436.1| 4262|Homo sapiens secreted mucin MUC17
protein.
Length = 4262
Score = 32.3 bits (70), Expect = 1.1
Identities = 25/77 (32%), Positives = 42/77 (54%)
Frame = -3
Query: 234 NASSLITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTA 55
+ + L TS + ++ S TTT G + + P++ S L+TS+ PV SIT T+
Sbjct: 768 STTPLDTSTHITTSTEASCSPTTTEGTSMPISTPSEGSPLLTSI---PV--SITP-VTSP 821
Query: 54 GAATIVLEPTDTSSLIT 4
A+T+ P D++S +T
Sbjct: 822 EASTLSTTPVDSNSPVT 838
Score = 31.1 bits (67), Expect = 2.6
Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Frame = -3
Query: 231 ASSLITSVALAPVEDSIGSFTTTAGAAT-IVLEPTDTSSLITSVALAPVEDSITSFTTTA 55
ASS ++++ PV+ SI T+T G+++ E T S P+ + S A
Sbjct: 2882 ASSEASTLSTTPVDTSIPVTTSTEGSSSPTTAEGTSMPISTPSEVSTPLTSILVSTVPVA 2941
Query: 54 G--AATIVLEPTDTSSLIT 4
G A+T+ P DT + +T
Sbjct: 2942 GSEASTLSTTPVDTRTPVT 2960
Score = 30.3 bits (65), Expect = 4.5
Identities = 31/145 (21%), Positives = 51/145 (35%), Gaps = 7/145 (4%)
Frame = +2
Query: 5 VINDEVSVGSKTIV--AAPAVVVNDVIESSTGASATEVINDEVSVGSKTIVAAPAVVVND 178
V++ E S S T V + P + S T A T + S G+ + + P V
Sbjct: 3352 VVSSEASTLSTTPVDTSTPVTTSTEASLSPTTAEGTSIPTSSPSEGTTPLASMP-VSTTP 3410
Query: 179 PIESSTGASATEVINDEALVSSKXXXXXXXXXXXXXXXXXXLNTEAP-----QDLSTKIL 343
+ S +T ++ LV++ +E LST +
Sbjct: 3411 VVSSEVNTLSTTPVDSNTLVTTSTEASSSPTIAEGTSLPTSTTSEGSTPLSIMPLSTTPV 3470
Query: 344 ADAVPEAVIVTAPEAETAITTGSPT 418
A + + T + T +TT SPT
Sbjct: 3471 ASSEASTLSTTPVDTSTPVTTSSPT 3495
>AJ606307-1|CAE54435.1| 4493|Homo sapiens membrane mucin MUC17
protein.
Length = 4493
Score = 32.3 bits (70), Expect = 1.1
Identities = 25/77 (32%), Positives = 42/77 (54%)
Frame = -3
Query: 234 NASSLITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTA 55
+ + L TS + ++ S TTT G + + P++ S L+TS+ PV SIT T+
Sbjct: 768 STTPLDTSTHITTSTEASCSPTTTEGTSMPISTPSEGSPLLTSI---PV--SITP-VTSP 821
Query: 54 GAATIVLEPTDTSSLIT 4
A+T+ P D++S +T
Sbjct: 822 EASTLSTTPVDSNSPVT 838
Score = 31.1 bits (67), Expect = 2.6
Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Frame = -3
Query: 231 ASSLITSVALAPVEDSIGSFTTTAGAAT-IVLEPTDTSSLITSVALAPVEDSITSFTTTA 55
ASS ++++ PV+ SI T+T G+++ E T S P+ + S A
Sbjct: 2882 ASSEASTLSTTPVDTSIPVTTSTEGSSSPTTAEGTSMPISTPSEVSTPLTSILVSTVPVA 2941
Query: 54 G--AATIVLEPTDTSSLIT 4
G A+T+ P DT + +T
Sbjct: 2942 GSEASTLSTTPVDTRTPVT 2960
Score = 30.3 bits (65), Expect = 4.5
Identities = 31/145 (21%), Positives = 51/145 (35%), Gaps = 7/145 (4%)
Frame = +2
Query: 5 VINDEVSVGSKTIV--AAPAVVVNDVIESSTGASATEVINDEVSVGSKTIVAAPAVVVND 178
V++ E S S T V + P + S T A T + S G+ + + P V
Sbjct: 3352 VVSSEASTLSTTPVDTSTPVTTSTEASLSPTTAEGTSIPTSSPSEGTTPLASMP-VSTTP 3410
Query: 179 PIESSTGASATEVINDEALVSSKXXXXXXXXXXXXXXXXXXLNTEAP-----QDLSTKIL 343
+ S +T ++ LV++ +E LST +
Sbjct: 3411 VVSSEVNTLSTTPVDSNTLVTTSTEASSSPTIAEGTSLPTSTTSEGSTPLSIMPLSTTPV 3470
Query: 344 ADAVPEAVIVTAPEAETAITTGSPT 418
A + + T + T +TT SPT
Sbjct: 3471 ASSEASTLSTTPVDTSTPVTTSSPT 3495
>AF414442-1|AAL65133.2|22152|Homo sapiens ovarian cancer related tumor
marker CA125 protein.
Length = 22152
Score = 31.1 bits (67), Expect = 2.6
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Frame = -3
Query: 198 PVEDSIGSFTTTAGAATIVLEP---TDTSSLITSVALAPVEDSITSFTTTAGAATIVLEP 28
PV + SF+ ++ AT V+ T+ SS + + + +TS T++GAAT P
Sbjct: 11702 PVSRTTSSFSHSSPDATPVMATSPRTEASSAVLTTISPGAPEMVTSQITSSGAATSTTVP 11761
Query: 27 TDTSS 13
T T S
Sbjct: 11762 TLTHS 11766
>AF361486-1|AAK74120.3| 6995|Homo sapiens mucin 16 protein.
Length = 6995
Score = 31.1 bits (67), Expect = 2.6
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Frame = -3
Query: 198 PVEDSIGSFTTTAGAATIVLEP---TDTSSLITSVALAPVEDSITSFTTTAGAATIVLEP 28
PV + SF+ ++ AT V+ T+ SS + + + +TS T++GAAT P
Sbjct: 3406 PVSRTTSSFSHSSPDATPVMATSPRTEASSAVLTTISPGAPEMVTSQITSSGAATSTTVP 3465
Query: 27 TDTSS 13
T T S
Sbjct: 3466 TLTHS 3470
>BC126315-1|AAI26316.1| 1224|Homo sapiens MUC17 protein protein.
Length = 1224
Score = 30.3 bits (65), Expect = 4.5
Identities = 31/145 (21%), Positives = 51/145 (35%), Gaps = 7/145 (4%)
Frame = +2
Query: 5 VINDEVSVGSKTIV--AAPAVVVNDVIESSTGASATEVINDEVSVGSKTIVAAPAVVVND 178
V++ E S S T V + P + S T A T + S G+ + + P V
Sbjct: 83 VVSSEASTLSTTPVDTSTPVTTSTEASLSPTTAEGTSIPTSSPSEGTTPLASMP-VSTTP 141
Query: 179 PIESSTGASATEVINDEALVSSKXXXXXXXXXXXXXXXXXXLNTEAP-----QDLSTKIL 343
+ S +T ++ LV++ +E LST +
Sbjct: 142 VVSSEVNTLSTTPVDSNTLVTTSTEASSSPTIAEGTSLPTSTTSEGSTPLSIMPLSTTPV 201
Query: 344 ADAVPEAVIVTAPEAETAITTGSPT 418
A + + T + T +TT SPT
Sbjct: 202 ASSEASTLSTTPVDTSTPVTTSSPT 226
>AY113189-1|AAM77920.1| 755|Homo sapiens OCT-1 protein protein.
Length = 755
Score = 30.3 bits (65), Expect = 4.5
Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Frame = -3
Query: 219 ITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAA-T 43
+TS A+ + + S TT+ AT++ SS +TS +L+P + S + + A+ T
Sbjct: 496 LTSAAVTNLSVTGTSDTTSNNTATVISTAPPASSAVTSPSLSPSPSASASTSEASSASET 555
Query: 42 IVLEPTDT 19
++ T T
Sbjct: 556 STIQTTST 563
>X74955-1|CAA52910.1| 622|Homo sapiens mucin protein.
Length = 622
Score = 29.9 bits (64), Expect = 6.0
Identities = 18/75 (24%), Positives = 30/75 (40%)
Frame = -3
Query: 228 SSLITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGA 49
+ L T+ S + ++T G I+ EP+ T+++ S + T
Sbjct: 253 TELTTTATTTASTGSTATLSSTPGTTWILTEPSTTATVTVPTGSTATASSTQATAGTPHV 312
Query: 48 ATIVLEPTDTSSLIT 4
+T PT TSS T
Sbjct: 313 STTATTPTVTSSKAT 327
>X13403-1|CAA31767.1| 743|Homo sapiens protein ( Human mRNA for
octamer-binding protein Oct-1. ).
Length = 743
Score = 29.5 bits (63), Expect = 7.9
Identities = 20/69 (28%), Positives = 36/69 (52%)
Frame = -3
Query: 219 ITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAATI 40
+TS A+ + + S TT+ AT++ SS +TS +L+P S ++ T+ A +A+
Sbjct: 484 LTSAAVTNLSVTGTSDTTSNNTATVISTAPPASSAVTSPSLSP-SPSASASTSEASSASE 542
Query: 39 VLEPTDTSS 13
TS+
Sbjct: 543 TSTTQTTST 551
>BC052274-1|AAH52274.1| 743|Homo sapiens POU class 2 homeobox 1
protein.
Length = 743
Score = 29.5 bits (63), Expect = 7.9
Identities = 20/69 (28%), Positives = 36/69 (52%)
Frame = -3
Query: 219 ITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAATI 40
+TS A+ + + S TT+ AT++ SS +TS +L+P S ++ T+ A +A+
Sbjct: 484 LTSAAVTNLSVTGTSDTTSNNTATVISTAPPASSAVTSPSLSP-SPSASASTSEASSASE 542
Query: 39 VLEPTDTSS 13
TS+
Sbjct: 543 TSTTQTTST 551
>BC007388-1|AAH07388.1| 561|Homo sapiens POU2F1 protein protein.
Length = 561
Score = 29.5 bits (63), Expect = 7.9
Identities = 20/69 (28%), Positives = 36/69 (52%)
Frame = -3
Query: 219 ITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAATI 40
+TS A+ + + S TT+ AT++ SS +TS +L+P S ++ T+ A +A+
Sbjct: 392 LTSAAVTNLSVTGTSDTTSNNTATVISTAPPASSAVTSPSLSP-SPSASASTSEASSASE 450
Query: 39 VLEPTDTSS 13
TS+
Sbjct: 451 TSTTQTTST 459
>BC003571-1|AAH03571.1| 743|Homo sapiens POU2F1 protein protein.
Length = 743
Score = 29.5 bits (63), Expect = 7.9
Identities = 20/69 (28%), Positives = 36/69 (52%)
Frame = -3
Query: 219 ITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAATI 40
+TS A+ + + S TT+ AT++ SS +TS +L+P S ++ T+ A +A+
Sbjct: 484 LTSAAVTNLSVTGTSDTTSNNTATVISTAPPASSAVTSPSLSP-SPSASASTSEASSASE 542
Query: 39 VLEPTDTSS 13
TS+
Sbjct: 543 TSTTQTTST 551
>BC001664-1|AAH01664.1| 743|Homo sapiens POU2F1 protein protein.
Length = 743
Score = 29.5 bits (63), Expect = 7.9
Identities = 20/69 (28%), Positives = 36/69 (52%)
Frame = -3
Query: 219 ITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAATI 40
+TS A+ + + S TT+ AT++ SS +TS +L+P S ++ T+ A +A+
Sbjct: 484 LTSAAVTNLSVTGTSDTTSNNTATVISTAPPASSAVTSPSLSP-SPSASASTSEASSASE 542
Query: 39 VLEPTDTSS 13
TS+
Sbjct: 543 TSTTQTTST 551
>AL136984-5|CAI15171.1| 561|Homo sapiens POU domain, class 2,
transcription factor 1 protein.
Length = 561
Score = 29.5 bits (63), Expect = 7.9
Identities = 20/69 (28%), Positives = 36/69 (52%)
Frame = -3
Query: 219 ITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAATI 40
+TS A+ + + S TT+ AT++ SS +TS +L+P S ++ T+ A +A+
Sbjct: 392 LTSAAVTNLSVTGTSDTTSNNTATVISTAPPASSAVTSPSLSP-SPSASASTSEASSASE 450
Query: 39 VLEPTDTSS 13
TS+
Sbjct: 451 TSTTQTTST 459
>AL136984-4|CAI15170.1| 741|Homo sapiens POU domain, class 2,
transcription factor 1 protein.
Length = 741
Score = 29.5 bits (63), Expect = 7.9
Identities = 20/69 (28%), Positives = 36/69 (52%)
Frame = -3
Query: 219 ITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAATI 40
+TS A+ + + S TT+ AT++ SS +TS +L+P S ++ T+ A +A+
Sbjct: 482 LTSAAVTNLSVTGTSDTTSNNTATVISTAPPASSAVTSPSLSP-SPSASASTSEASSASE 540
Query: 39 VLEPTDTSS 13
TS+
Sbjct: 541 TSTTQTTST 549
>AL136984-3|CAI15169.1| 743|Homo sapiens POU domain, class 2,
transcription factor 1 protein.
Length = 743
Score = 29.5 bits (63), Expect = 7.9
Identities = 20/69 (28%), Positives = 36/69 (52%)
Frame = -3
Query: 219 ITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAATI 40
+TS A+ + + S TT+ AT++ SS +TS +L+P S ++ T+ A +A+
Sbjct: 484 LTSAAVTNLSVTGTSDTTSNNTATVISTAPPASSAVTSPSLSP-SPSASASTSEASSASE 542
Query: 39 VLEPTDTSS 13
TS+
Sbjct: 543 TSTTQTTST 551
>AL136984-1|CAI15167.1| 755|Homo sapiens POU domain, class 2,
transcription factor 1 protein.
Length = 755
Score = 29.5 bits (63), Expect = 7.9
Identities = 20/69 (28%), Positives = 36/69 (52%)
Frame = -3
Query: 219 ITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAATI 40
+TS A+ + + S TT+ AT++ SS +TS +L+P S ++ T+ A +A+
Sbjct: 496 LTSAAVTNLSVTGTSDTTSNNTATVISTAPPASSAVTSPSLSP-SPSASASTSEASSASE 554
Query: 39 VLEPTDTSS 13
TS+
Sbjct: 555 TSTTQTTST 563
>AJ298318-1|CAC83675.1| 1349|Homo sapiens mucin 5 protein.
Length = 1349
Score = 29.5 bits (63), Expect = 7.9
Identities = 26/83 (31%), Positives = 37/83 (44%), Gaps = 5/83 (6%)
Frame = -3
Query: 237 TNASSLITSVALAPVEDSIGS---FTTTAGAATIVLEPTDTSSLITSVALAPVEDSITS- 70
+ S+ TS AP +I + TT+A A+ PT TSS T+ + S TS
Sbjct: 703 STTSAPTTSTISAPTTSTISAPTTSTTSAPTASTTSAPTSTSSAPTTNTTSAPTTSTTSA 762
Query: 69 -FTTTAGAATIVLEPTDTSSLIT 4
T+T A T T +S I+
Sbjct: 763 PITSTISAPTTSTTSTPQTSTIS 785
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 58,560,278
Number of Sequences: 237096
Number of extensions: 1063665
Number of successful extensions: 2707
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 2364
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2690
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5251598958
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -