Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt5b19
(539 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 38 0.005
Z74473-5|CAI79195.1| 245|Caenorhabditis elegans Hypothetical pr... 37 0.008
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 35 0.033
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 35 0.033
AC024880-2|AAF60914.4| 665|Caenorhabditis elegans Hypothetical ... 32 0.30
Z69664-5|CAE17882.2| 360|Caenorhabditis elegans Hypothetical pr... 31 0.53
Z81062-8|CAD59145.1| 808|Caenorhabditis elegans Hypothetical pr... 31 0.70
AL032637-15|CAA21616.2| 370|Caenorhabditis elegans Hypothetical... 30 0.93
Z84574-6|CAE17784.1| 174|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z81528-4|CAB04281.1| 575|Caenorhabditis elegans Hypothetical pr... 29 1.6
U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical pr... 29 1.6
U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical pr... 29 1.6
U28941-5|AAM98026.2| 989|Caenorhabditis elegans Hypothetical pr... 29 1.6
AY314775-1|AAQ84882.1| 971|Caenorhabditis elegans methuselah-li... 29 1.6
AF016656-1|AAB66040.1| 332|Caenorhabditis elegans Hypothetical ... 29 1.6
U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical pr... 29 2.8
U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical pr... 29 2.8
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 29 2.8
AC006797-1|AAF60743.1| 1079|Caenorhabditis elegans Hypothetical ... 29 2.8
U97191-1|AAB52432.1| 805|Caenorhabditis elegans Nuclear pore co... 28 3.7
AF077538-1|AAC64622.1| 1275|Caenorhabditis elegans Hypothetical ... 28 3.7
Z99288-1|CAB16545.2| 339|Caenorhabditis elegans Hypothetical pr... 27 6.5
Z81086-2|CAB03121.3| 1045|Caenorhabditis elegans Hypothetical pr... 27 6.5
Z70205-4|CAA94115.2| 528|Caenorhabditis elegans Hypothetical pr... 27 6.5
AF077534-3|AAC26290.1| 389|Caenorhabditis elegans Hypothetical ... 27 6.5
U07628-1|AAA17738.1| 515|Caenorhabditis elegans APX-1 protein. 27 8.6
AF106573-5|AAF02104.2| 358|Caenorhabditis elegans Seven tm rece... 27 8.6
AF101319-2|AAC69353.4| 515|Caenorhabditis elegans Anterior phar... 27 8.6
AC024880-1|AAR12985.1| 634|Caenorhabditis elegans Hypothetical ... 27 8.6
>Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical
protein C30H6.11 protein.
Length = 460
Score = 37.9 bits (84), Expect = 0.005
Identities = 22/78 (28%), Positives = 32/78 (41%)
Frame = -3
Query: 237 TNASSLITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTT 58
T ++ T+ P + TTT T PT T++ T+ AP + T TTT
Sbjct: 148 TETTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTAPTTTTTTPTTTT 207
Query: 57 AGAATIVLEPTDTSSLIT 4
T PT T++ T
Sbjct: 208 TTPTTTTTVPTTTTTTPT 225
Score = 37.1 bits (82), Expect = 0.008
Identities = 21/78 (26%), Positives = 31/78 (39%)
Frame = -3
Query: 237 TNASSLITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTT 58
T ++ T+ P + TTT T PT T++ T+ P + T TTT
Sbjct: 155 TTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTAPTTTTTTPTTTTTTPTTTT 214
Query: 57 AGAATIVLEPTDTSSLIT 4
T PT T++ T
Sbjct: 215 TVPTTTTTTPTTTTTTTT 232
Score = 36.3 bits (80), Expect = 0.014
Identities = 21/78 (26%), Positives = 30/78 (38%)
Frame = -3
Query: 237 TNASSLITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTT 58
T + T+ E + TTT T PT T++ T+ P + T TTT
Sbjct: 134 TTTTETTTTPTTTTTETTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTT 193
Query: 57 AGAATIVLEPTDTSSLIT 4
T PT T++ T
Sbjct: 194 TAPTTTTTTPTTTTTTPT 211
Score = 35.5 bits (78), Expect = 0.025
Identities = 20/78 (25%), Positives = 30/78 (38%)
Frame = -3
Query: 237 TNASSLITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTT 58
T ++ T P + TTT T PT T++ T+ P + TTT
Sbjct: 141 TTPTTTTTETTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTAPTTTT 200
Query: 57 AGAATIVLEPTDTSSLIT 4
T PT T+++ T
Sbjct: 201 TTPTTTTTTPTTTTTVPT 218
Score = 33.5 bits (73), Expect = 0.100
Identities = 20/78 (25%), Positives = 29/78 (37%)
Frame = -3
Query: 237 TNASSLITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTT 58
T + T P ++ + TTT T T T+ T+ E + T TTT
Sbjct: 99 TTTPTTTTETTTTPTTETTTTPTTTTPTTTTTTPTTTTTETTTTPTTTTTETTTTPTTTT 158
Query: 57 AGAATIVLEPTDTSSLIT 4
T PT T++ T
Sbjct: 159 TTPTTTTTTPTTTTTTPT 176
Score = 32.3 bits (70), Expect = 0.23
Identities = 21/78 (26%), Positives = 31/78 (39%)
Frame = -3
Query: 237 TNASSLITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTT 58
T ++ T+ P + TTT T PT T++ T+ P + T TTT
Sbjct: 169 TTTTTTPTTTTTTPTTTTTTPTTTTTAPTTTTTTPTTTTTTPTTTTTVPTTTTTTPTTTT 228
Query: 57 AGAATIVLEPTDTSSLIT 4
T PT T++ T
Sbjct: 229 TTTTT----PTTTTTTPT 242
Score = 30.7 bits (66), Expect = 0.70
Identities = 22/80 (27%), Positives = 32/80 (40%), Gaps = 2/80 (2%)
Frame = -3
Query: 237 TNASSLITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFT-- 64
T ++ T+ AP + TTT T PT T++ T+ + T+ T
Sbjct: 183 TTTTTTPTTTTTAPTTTTTTPTTTTTTPTTTTTVPTTTTTTPTTTTTTTTTPTTTTTTPT 242
Query: 63 TTAGAATIVLEPTDTSSLIT 4
TT AT E T T+ T
Sbjct: 243 TTTTPATTTSETTTTTPTTT 262
Score = 30.3 bits (65), Expect = 0.93
Identities = 19/79 (24%), Positives = 31/79 (39%), Gaps = 1/79 (1%)
Frame = -3
Query: 237 TNASSLITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAP-VEDSITSFTT 61
T ++ T+ P + TTT T PT T++ T+ P ++ + TT
Sbjct: 162 TTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTAPTTTTTTPTTTTTTPTTTTTVPTTTT 221
Query: 60 TAGAATIVLEPTDTSSLIT 4
T T T T++ T
Sbjct: 222 TTPTTTTTTTTTPTTTTTT 240
Score = 28.7 bits (61), Expect = 2.8
Identities = 18/57 (31%), Positives = 23/57 (40%), Gaps = 1/57 (1%)
Frame = -3
Query: 171 TTTAGAATIVLEPTDT-SSLITSVALAPVEDSITSFTTTAGAATIVLEPTDTSSLIT 4
TTT T E T T ++ T P + T TTT T PT T++ T
Sbjct: 127 TTTTTPTTTTTETTTTPTTTTTETTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTPT 183
Score = 27.1 bits (57), Expect = 8.6
Identities = 20/79 (25%), Positives = 28/79 (35%), Gaps = 1/79 (1%)
Frame = -3
Query: 237 TNASSLITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVAL-APVEDSITSFTT 61
T S+ T+ P + TTT T PT T+ T+ + T+ TT
Sbjct: 68 TTTSTTTTTTPTTPTTTTTTPTTTTTTPTTTTTTPTTTTETTTTPTTETTTTPTTTTPTT 127
Query: 60 TAGAATIVLEPTDTSSLIT 4
T T T T+ T
Sbjct: 128 TTTTPTTTTTETTTTPTTT 146
Score = 27.1 bits (57), Expect = 8.6
Identities = 20/78 (25%), Positives = 28/78 (35%)
Frame = -3
Query: 237 TNASSLITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTT 58
T ++ T+ P + TTT T E T T + T + T+ TTT
Sbjct: 82 TTTTTTPTTTTTTPTTTTTTPTTTTETTTTPTTETTTTPTTTTPTTTTTTPTTTTTETTT 141
Query: 57 AGAATIVLEPTDTSSLIT 4
T E T T + T
Sbjct: 142 T-PTTTTTETTTTPTTTT 158
>Z74473-5|CAI79195.1| 245|Caenorhabditis elegans Hypothetical
protein F56H9.6 protein.
Length = 245
Score = 37.1 bits (82), Expect = 0.008
Identities = 22/77 (28%), Positives = 32/77 (41%)
Frame = -3
Query: 243 ELTNASSLITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFT 64
E+T + +T+ + + TTT T PT T+S TS + TS T
Sbjct: 51 EVTTTTEPVTTTTTPTTTSTTSTTTTTTPTTTTTTTPTTTTS-TTSTTTTTTPTTTTSTT 109
Query: 63 TTAGAATIVLEPTDTSS 13
TT T PT T++
Sbjct: 110 TTTTTTTTTATPTTTTT 126
Score = 33.5 bits (73), Expect = 0.100
Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Frame = -3
Query: 171 TTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAG--AATIVLEPTDTSSLIT 4
TTT T PT TS+ T+ P + T+ TTT + T PT T+S T
Sbjct: 53 TTTTEPVTTTTTPTTTSTTSTTTTTTPTTTTTTTPTTTTSTTSTTTTTTPTTTTSTTT 110
Score = 31.1 bits (67), Expect = 0.53
Identities = 24/82 (29%), Positives = 35/82 (42%), Gaps = 4/82 (4%)
Frame = -3
Query: 246 LELTNASSLITS-VALAPVED---SIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDS 79
L LT +I S +A +P D + TTT T E T T+ +T+ +
Sbjct: 11 LLLTYKLDVINSCIATSPTADPTTTTTEATTTTEITTTTEEVTTTTEPVTTTTTPTTTST 70
Query: 78 ITSFTTTAGAATIVLEPTDTSS 13
++ TTT T PT T+S
Sbjct: 71 TSTTTTTTPTTTTTTTPTTTTS 92
Score = 29.5 bits (63), Expect = 1.6
Identities = 16/56 (28%), Positives = 23/56 (41%)
Frame = -3
Query: 171 TTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAATIVLEPTDTSSLIT 4
TTT T EP T++ T+ + + T TTT T T T++ T
Sbjct: 46 TTTTEEVTTTTEPVTTTTTPTTTSTTSTTTTTTPTTTTTTTPTTTTSTTSTTTTTT 101
Score = 29.1 bits (62), Expect = 2.1
Identities = 16/56 (28%), Positives = 23/56 (41%)
Frame = -3
Query: 171 TTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAATIVLEPTDTSSLIT 4
TTT T T T++ T+ P + T+ TTT T T T++ T
Sbjct: 61 TTTTPTTTSTTSTTTTTTPTTTTTTTPTTTTSTTSTTTTTTPTTTTSTTTTTTTTT 116
Score = 27.5 bits (58), Expect = 6.5
Identities = 22/81 (27%), Positives = 32/81 (39%)
Frame = -3
Query: 246 LELTNASSLITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSF 67
L++ N S + TS P + + TTT T T T + T+ + T+
Sbjct: 17 LDVIN-SCIATSPTADPTTTTTEATTTTEITTTTEEVTTTTEPVTTTTTPTTTSTTSTTT 75
Query: 66 TTTAGAATIVLEPTDTSSLIT 4
TTT T T TS+ T
Sbjct: 76 TTTPTTTTTTTPTTTTSTTST 96
>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 35.1 bits (77), Expect = 0.033
Identities = 21/55 (38%), Positives = 34/55 (61%)
Frame = -3
Query: 168 TTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAATIVLEPTDTSSLIT 4
TT+ A+T EP+ TS++ TS + +PV ++TS ++ ++T V PT T S T
Sbjct: 433 TTSTASTSTTEPS-TSTVTTSPSTSPVTSTVTS---SSSSSTTVTTPTSTESTST 483
Score = 30.7 bits (66), Expect = 0.70
Identities = 20/76 (26%), Positives = 35/76 (46%)
Frame = -3
Query: 240 LTNASSLITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTT 61
+ + S+ T+ V ++ S TT + + V TS+ S + +E + T+FT+
Sbjct: 271 IESTSTSTTTPTTTTVTSTVTSTTTVPTSTSTVTTAMSTSTSTPSTSTT-IESTSTTFTS 329
Query: 60 TAGAATIVLEPTDTSS 13
TA +T T SS
Sbjct: 330 TASTSTSSTSTTQQSS 345
Score = 29.1 bits (62), Expect = 2.1
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Frame = -3
Query: 177 SFTTTAGAATIVLEPTD--TSSLITSVALAPVEDSITSFTTTAGAATIVLEPTDTSSLIT 4
+FTTT +T EP+ T++ +TS + T+ TT+ A+T EP+ TS++ T
Sbjct: 393 TFTTTMLTSTTTEEPSTSTTTTEVTSTSSTVTTTEPTTTLTTSTASTSTTEPS-TSTVTT 451
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 35.1 bits (77), Expect = 0.033
Identities = 21/55 (38%), Positives = 34/55 (61%)
Frame = -3
Query: 168 TTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAATIVLEPTDTSSLIT 4
TT+ A+T EP+ TS++ TS + +PV ++TS ++ ++T V PT T S T
Sbjct: 433 TTSTASTSTTEPS-TSTVTTSPSTSPVTSTVTS---SSSSSTTVTTPTSTESTST 483
Score = 30.7 bits (66), Expect = 0.70
Identities = 20/76 (26%), Positives = 35/76 (46%)
Frame = -3
Query: 240 LTNASSLITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTT 61
+ + S+ T+ V ++ S TT + + V TS+ S + +E + T+FT+
Sbjct: 271 IESTSTSTTTPTTTTVTSTVTSTTTVPTSTSTVTTAMSTSTSTPSTSTT-IESTSTTFTS 329
Query: 60 TAGAATIVLEPTDTSS 13
TA +T T SS
Sbjct: 330 TASTSTSSTSTTQQSS 345
Score = 29.1 bits (62), Expect = 2.1
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Frame = -3
Query: 177 SFTTTAGAATIVLEPTD--TSSLITSVALAPVEDSITSFTTTAGAATIVLEPTDTSSLIT 4
+FTTT +T EP+ T++ +TS + T+ TT+ A+T EP+ TS++ T
Sbjct: 393 TFTTTMLTSTTTEEPSTSTTTTEVTSTSSTVTTTEPTTTLTTSTASTSTTEPS-TSTVTT 451
>AC024880-2|AAF60914.4| 665|Caenorhabditis elegans Hypothetical
protein Y97E10AR.2a protein.
Length = 665
Score = 31.9 bits (69), Expect = 0.30
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Frame = -3
Query: 195 VEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAP--VEDSITSFTTTAGAATIVLEPTD 22
++ SI + +TI+++ T+T++ T+ P + + TS TTT T EPT
Sbjct: 121 LDSSINATLVVPPNSTIIID-TETTTTFTTTTEKPTTIPSTTTSSTTTTTTTTTTEEPTT 179
Query: 21 TSSLI 7
T+S I
Sbjct: 180 TTSPI 184
Score = 27.9 bits (59), Expect = 4.9
Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Frame = -3
Query: 237 TNASSLITSVALAP--VEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFT 64
T ++ T+ P + + S TTT T EPT T+S I + + + T+ T
Sbjct: 141 TETTTTFTTTTEKPTTIPSTTTSSTTTTTTTTTTEEPTTTTSPIATTTTS--TSTTTTET 198
Query: 63 TTAGAATIVLEPTDTSSL 10
T AT EPT ++ L
Sbjct: 199 PTTSEAT-THEPTASTEL 215
>Z69664-5|CAE17882.2| 360|Caenorhabditis elegans Hypothetical
protein K04D7.6 protein.
Length = 360
Score = 31.1 bits (67), Expect = 0.53
Identities = 22/44 (50%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = -3
Query: 138 EPTDTSSLITSVALAP--VEDSITSFTTTAGAATIVLEPTDTSS 13
E T LI AL P E SI+ TTTA A IV EPT +SS
Sbjct: 258 EATPVFILIAFGALMPDLKEWSISKTTTTAEATIIVTEPTSSSS 301
Score = 30.3 bits (65), Expect = 0.93
Identities = 22/44 (50%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = -3
Query: 243 ELTNASSLITSVALAP--VEDSIGSFTTTAGAATIVLEPTDTSS 118
E T LI AL P E SI TTTA A IV EPT +SS
Sbjct: 258 EATPVFILIAFGALMPDLKEWSISKTTTTAEATIIVTEPTSSSS 301
>Z81062-8|CAD59145.1| 808|Caenorhabditis elegans Hypothetical
protein F15A4.8b protein.
Length = 808
Score = 30.7 bits (66), Expect = 0.70
Identities = 30/87 (34%), Positives = 40/87 (45%), Gaps = 8/87 (9%)
Frame = -3
Query: 240 LTNASSL---ITSVALAPVEDS-----IGSFTTTAGAATIVLEPTDTSSLITSVALAPVE 85
L NASS +TS AP +S + S TTT + T +E T T+ + S + PV+
Sbjct: 398 LLNASSARPNVTSTTTAPTTESSAIPDVTSTTTTKSSTTPPVESTTTAPVTKSSSTPPVK 457
Query: 84 DSITSFTTTAGAATIVLEPTDTSSLIT 4
S T T + T T TSS T
Sbjct: 458 -STTIAPVTMPSTTEKTTFTSTSSSTT 483
>AL032637-15|CAA21616.2| 370|Caenorhabditis elegans Hypothetical
protein Y43F8C.16 protein.
Length = 370
Score = 30.3 bits (65), Expect = 0.93
Identities = 27/88 (30%), Positives = 38/88 (43%), Gaps = 13/88 (14%)
Frame = -3
Query: 228 SSLITSVALAPVEDSIGSFTTTAGA-------------ATIVLEPTDTSSLITSVALAPV 88
S++ TS P S TTTA T V++ T T+ +++ V
Sbjct: 190 STITTSTTPNPSSPSTVQSTTTAEPTSTITSTTVPESSTTSVVQSTTTAEPTSTITSTTV 249
Query: 87 EDSITSFTTTAGAATIVLEPTDTSSLIT 4
+S TS T+ A+T L PT T S IT
Sbjct: 250 PESSTSLLTSTLASTTTLIPTSTMSTIT 277
>Z84574-6|CAE17784.1| 174|Caenorhabditis elegans Hypothetical
protein F33E2.7 protein.
Length = 174
Score = 29.9 bits (64), Expect = 1.2
Identities = 17/53 (32%), Positives = 24/53 (45%)
Frame = -3
Query: 171 TTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAATIVLEPTDTSS 13
TTT T PT T++ T+ P + T TTT +T + E TS+
Sbjct: 97 TTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTRSTPLTEVFRTST 149
Score = 27.1 bits (57), Expect = 8.6
Identities = 14/43 (32%), Positives = 18/43 (41%)
Frame = -3
Query: 171 TTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAAT 43
TTT T PT T++ T+ P + T TTT T
Sbjct: 90 TTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTPTT 132
>Z81528-4|CAB04281.1| 575|Caenorhabditis elegans Hypothetical
protein F35E2.5 protein.
Length = 575
Score = 29.5 bits (63), Expect = 1.6
Identities = 24/81 (29%), Positives = 40/81 (49%)
Frame = -3
Query: 246 LELTNASSLITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSF 67
L T A++++T+ + V + + TT+ A T T++ IT+VA ++
Sbjct: 344 LTTTKATTVLTTTPVK-VTPATTTLPTTSLALETTTTATRTTAKITAVATVARTNTTQPP 402
Query: 66 TTTAGAATIVLEPTDTSSLIT 4
TTT ++T L T TSS T
Sbjct: 403 TTTPLSSTTALPTTLTSSSST 423
>U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical
protein F49E10.2a protein.
Length = 790
Score = 29.5 bits (63), Expect = 1.6
Identities = 21/76 (27%), Positives = 32/76 (42%), Gaps = 7/76 (9%)
Frame = -3
Query: 219 ITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAP-------VEDSITSFTT 61
+ V+ P S S TT + T + T +S T+ P S T+ TT
Sbjct: 577 LRKVSTVPPTTSTSSTTTQKPSTTTTVPSTTPTSTTTTTTTTPKPTTSTSTSTSTTTTTT 636
Query: 60 TAGAATIVLEPTDTSS 13
T+ AT +PT T++
Sbjct: 637 TSTTATTTPQPTTTTT 652
>U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical
protein F49E10.2b protein.
Length = 842
Score = 29.5 bits (63), Expect = 1.6
Identities = 21/76 (27%), Positives = 32/76 (42%), Gaps = 7/76 (9%)
Frame = -3
Query: 219 ITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAP-------VEDSITSFTT 61
+ V+ P S S TT + T + T +S T+ P S T+ TT
Sbjct: 577 LRKVSTVPPTTSTSSTTTQKPSTTTTVPSTTPTSTTTTTTTTPKPTTSTSTSTSTTTTTT 636
Query: 60 TAGAATIVLEPTDTSS 13
T+ AT +PT T++
Sbjct: 637 TSTTATTTPQPTTTTT 652
>U28941-5|AAM98026.2| 989|Caenorhabditis elegans Hypothetical
protein F31D5.4 protein.
Length = 989
Score = 29.5 bits (63), Expect = 1.6
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Frame = -3
Query: 237 TNASSLITSVALAPVEDSI--GSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFT 64
T ASS +TS A ++ + TTT A+T + TS+ +TS + P +T+
Sbjct: 225 TEASSTVTSTTTARTTTTMIPTTPTTTTIASTSTVTSIVTSTTVTSTTV-PTTTVVTTVP 283
Query: 63 TTAGAATIVLEPTDTSS 13
TT +T + T++
Sbjct: 284 TTTATSTSTSTASTTTT 300
>AY314775-1|AAQ84882.1| 971|Caenorhabditis elegans methuselah-like
protein MTH-2 protein.
Length = 971
Score = 29.5 bits (63), Expect = 1.6
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Frame = -3
Query: 237 TNASSLITSVALAPVEDSI--GSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFT 64
T ASS +TS A ++ + TTT A+T + TS+ +TS + P +T+
Sbjct: 207 TEASSTVTSTTTARTTTTMIPTTPTTTTIASTSTVTSIVTSTTVTSTTV-PTTTVVTTVP 265
Query: 63 TTAGAATIVLEPTDTSS 13
TT +T + T++
Sbjct: 266 TTTATSTSTSTASTTTT 282
>AF016656-1|AAB66040.1| 332|Caenorhabditis elegans Hypothetical
protein C35A11.3 protein.
Length = 332
Score = 29.5 bits (63), Expect = 1.6
Identities = 16/68 (23%), Positives = 28/68 (41%)
Frame = +2
Query: 32 SKTIVAAPAVVVNDVIESSTGASATEVINDEVSVGSKTIVAAPAVVVNDPIESSTGASAT 211
+ T A + V+ +++ TE+ + T A+P N + S+T +AT
Sbjct: 37 TSTTTATESTTVSTSTTATSSTPTTEIFSSNSPSTETTTCASPTTSTNGHLTSTTDGAAT 96
Query: 212 EVINDEAL 235
I E L
Sbjct: 97 SPIKTEVL 104
>U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical
protein K06A9.1c protein.
Length = 825
Score = 28.7 bits (61), Expect = 2.8
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +2
Query: 77 IESSTGASATEVINDEVSVGSKTIVAAPAVV-VNDPIESSTGASATEV 217
I STG++AT V SVGS T A+P+ + TG++ T V
Sbjct: 268 ISGSTGSTATIVPGSSSSVGSSTQSASPSSPGTMSTVSGPTGSTVTVV 315
>U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical
protein K06A9.1a protein.
Length = 1032
Score = 28.7 bits (61), Expect = 2.8
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +2
Query: 77 IESSTGASATEVINDEVSVGSKTIVAAPAVV-VNDPIESSTGASATEV 217
I STG++AT V SVGS T A+P+ + TG++ T V
Sbjct: 475 ISGSTGSTATIVPGSSSSVGSSTQSASPSSPGTMSTVSGPTGSTVTVV 522
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical
protein K06A9.1b protein.
Length = 2232
Score = 28.7 bits (61), Expect = 2.8
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +2
Query: 77 IESSTGASATEVINDEVSVGSKTIVAAPAVV-VNDPIESSTGASATEV 217
I STG++AT V SVGS T A+P+ + TG++ T V
Sbjct: 475 ISGSTGSTATIVPGSSSSVGSSTQSASPSSPGTMSTVSGPTGSTVTVV 522
>AC006797-1|AAF60743.1| 1079|Caenorhabditis elegans Hypothetical
protein Y51B11A.1 protein.
Length = 1079
Score = 28.7 bits (61), Expect = 2.8
Identities = 35/160 (21%), Positives = 58/160 (36%)
Frame = +2
Query: 38 TIVAAPAVVVNDVIESSTGASATEVINDEVSVGSKTIVAAPAVVVNDPIESSTGASATEV 217
T+ + + ++ SST S++ I + + +T P P++++T +A E
Sbjct: 48 TLTSVDMETPSTLVLSSTPTSSSTPIKETTTTAPETTSTEPPSSSTTPVQTTT-TTAPET 106
Query: 218 INDEALVSSKXXXXXXXXXXXXXXXXXXLNTEAPQDLSTKILADAVPEAVIVTAPEAETA 397
+ EA SS +TE P ST + A T+ EA ++
Sbjct: 107 TSTEAPSSS-----TTPVQTTTTTAPETTSTEPPSS-STSPVQTTTTTAPETTSTEAPSS 160
Query: 398 ITTGSPTVDLXTIKPXXXXXXXXXXXSKPVETVTAETGAT 517
TT P T P + PV+T T T
Sbjct: 161 STT--PVQTTTTTAPETTSTEPPSSSTSPVQTTTTTAPET 198
>U97191-1|AAB52432.1| 805|Caenorhabditis elegans Nuclear pore
complex protein protein11 protein.
Length = 805
Score = 28.3 bits (60), Expect = 3.7
Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 3/79 (3%)
Frame = -3
Query: 240 LTNASSLITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVA-LAPVEDSITSFT 64
L ASS T + AP G+ TTTA AA ++ T+ A + P + T
Sbjct: 444 LFGASSTTTPASTAPTGGLFGAATTTAPAAAAPTGGLFGAATTTAPATVGPTGGLFGAAT 503
Query: 63 TT--AGAATIVLEPTDTSS 13
TT A AAT+ P+ S+
Sbjct: 504 TTTPATAATLGQTPSTVSA 522
>AF077538-1|AAC64622.1| 1275|Caenorhabditis elegans Hypothetical
protein H02F09.3 protein.
Length = 1275
Score = 28.3 bits (60), Expect = 3.7
Identities = 18/62 (29%), Positives = 22/62 (35%)
Frame = +2
Query: 20 VSVGSKTIVAAPAVVVNDVIESSTGASATEVINDEVSVGSKTIVAAPAVVVNDPIESSTG 199
V S T+ P VV T S + V T+V AP+ VV P T
Sbjct: 356 VVTSSPTVATTPTTVVTTPSTVVTVPSTVVTVPTTVVTNPSTVVTAPSTVVTVPTTVMTS 415
Query: 200 AS 205
S
Sbjct: 416 RS 417
>Z99288-1|CAB16545.2| 339|Caenorhabditis elegans Hypothetical
protein ZK262.1 protein.
Length = 339
Score = 27.5 bits (58), Expect = 6.5
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -2
Query: 517 SCSGFCSDSFYGFRFNNHNFFCNYFWL 437
SC F + S G N N FCN+FW+
Sbjct: 107 SCQ-FLTISIAGIFENRFNTFCNFFWV 132
>Z81086-2|CAB03121.3| 1045|Caenorhabditis elegans Hypothetical
protein F53B6.2a protein.
Length = 1045
Score = 27.5 bits (58), Expect = 6.5
Identities = 13/43 (30%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Frame = -2
Query: 271 CSGFYFNSFRAHQCLVINYFGSTCSR*RLNW-IIYNHSRCCNN 146
C G +SFR C V G TC + W + ++ C +N
Sbjct: 135 CDGLISSSFRFDACGVCGGRGDTCDNGKFIWKVSEEYTACASN 177
>Z70205-4|CAA94115.2| 528|Caenorhabditis elegans Hypothetical
protein C11H1.5 protein.
Length = 528
Score = 27.5 bits (58), Expect = 6.5
Identities = 23/72 (31%), Positives = 33/72 (45%)
Frame = -3
Query: 231 ASSLITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAG 52
A ++I + E SI T T +T PT T+S ITS AP S S + A
Sbjct: 316 APTVIKPYPPSSTESSIDFTTATESTST----PTSTTSDITSTTTAPTSASTYSTDSWAT 371
Query: 51 AATIVLEPTDTS 16
A +++ T T+
Sbjct: 372 ARQELVDFTATT 383
>AF077534-3|AAC26290.1| 389|Caenorhabditis elegans Hypothetical
protein K07D4.6 protein.
Length = 389
Score = 27.5 bits (58), Expect = 6.5
Identities = 25/78 (32%), Positives = 32/78 (41%), Gaps = 3/78 (3%)
Frame = -3
Query: 237 TNASSLITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLIT-SVALAPVEDSI--TSF 67
T S +T+V E S TTT T EPT T+S T + P S T+
Sbjct: 246 TTTHSSLTAVPGTTEETSTEPETTTTSTTTT--EPTTTTSTTTQTTTTVPTSTSTISTTS 303
Query: 66 TTTAGAATIVLEPTDTSS 13
TTT T + T+S
Sbjct: 304 TTTTTPTTTTTTTSTTTS 321
>U07628-1|AAA17738.1| 515|Caenorhabditis elegans APX-1 protein.
Length = 515
Score = 27.1 bits (57), Expect = 8.6
Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Frame = -3
Query: 240 LTNASSLITSVALAPVEDSIGSFT---TTAGAATIVLEPT 130
+TN SSL+T++ L + + GS T + T+++EPT
Sbjct: 1 MTNFSSLLTTIFLCIISSATGSGTIELLISSPQTVLVEPT 40
>AF106573-5|AAF02104.2| 358|Caenorhabditis elegans Seven tm
receptor protein 79 protein.
Length = 358
Score = 27.1 bits (57), Expect = 8.6
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = -2
Query: 406 CGYSSFSLWGCYNYSFRYSICENFRTQILWRF 311
CGYS SL ++FR+ + N + WRF
Sbjct: 105 CGYSILSLNA--QFAFRWIVMSNSGKNLFWRF 134
>AF101319-2|AAC69353.4| 515|Caenorhabditis elegans Anterior pharynx
in excess protein1 protein.
Length = 515
Score = 27.1 bits (57), Expect = 8.6
Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Frame = -3
Query: 240 LTNASSLITSVALAPVEDSIGSFT---TTAGAATIVLEPT 130
+TN SSL+T++ L + + GS T + T+++EPT
Sbjct: 1 MTNFSSLLTTIFLCIISSATGSGTIELLISSPQTVLVEPT 40
>AC024880-1|AAR12985.1| 634|Caenorhabditis elegans Hypothetical
protein Y97E10AR.2b protein.
Length = 634
Score = 27.1 bits (57), Expect = 8.6
Identities = 20/56 (35%), Positives = 27/56 (48%)
Frame = -3
Query: 177 SFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAATIVLEPTDTSSL 10
S TTT T EPT T+S I + + + T+ T T AT EPT ++ L
Sbjct: 113 SSTTTTTTTTTTEEPTTTTSPIATTTTS--TSTTTTETPTTSEAT-THEPTASTEL 165
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,677,442
Number of Sequences: 27780
Number of extensions: 196948
Number of successful extensions: 869
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 618
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 835
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1081316076
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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