Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt5b18
(541 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ342040-1|ABC69932.1| 822|Tribolium castaneum STIP protein. 23 2.3
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 22 3.0
AM295015-1|CAL25730.1| 549|Tribolium castaneum ecdysone recepto... 22 3.0
AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase ... 21 5.2
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 21 5.2
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 21 5.2
AM292341-1|CAL23153.2| 393|Tribolium castaneum gustatory recept... 21 6.9
AM292381-1|CAL23193.2| 364|Tribolium castaneum gustatory recept... 21 9.2
AM292351-1|CAL23163.2| 394|Tribolium castaneum gustatory recept... 21 9.2
AM292350-1|CAL23162.2| 429|Tribolium castaneum gustatory recept... 21 9.2
AM292328-1|CAL23140.2| 429|Tribolium castaneum gustatory recept... 21 9.2
>DQ342040-1|ABC69932.1| 822|Tribolium castaneum STIP protein.
Length = 822
Score = 22.6 bits (46), Expect = 2.3
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = +1
Query: 271 HLRSGRGCPDCWCPPGASQLPPLQRV 348
HLR GRG + P ++ +P + V
Sbjct: 192 HLRKGRGAIGAYGPEKSASIPKKKEV 217
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
protein.
Length = 2700
Score = 22.2 bits (45), Expect = 3.0
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = -3
Query: 62 GVFTGPKNCDDY 27
G+F+ PKNC Y
Sbjct: 564 GIFSDPKNCAAY 575
>AM295015-1|CAL25730.1| 549|Tribolium castaneum ecdysone receptor
(isoform A) protein.
Length = 549
Score = 22.2 bits (45), Expect = 3.0
Identities = 10/29 (34%), Positives = 14/29 (48%)
Frame = -3
Query: 401 NRQPDQRILQPNQHPSG*TLCKGGSWLAP 315
N PD ++P S TLC G ++P
Sbjct: 285 NGSPDVIKVEPELSDSEKTLCNGSKGISP 313
>AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase
protein.
Length = 677
Score = 21.4 bits (43), Expect = 5.2
Identities = 18/70 (25%), Positives = 30/70 (42%)
Frame = +2
Query: 74 NKMAENNPIYGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVV 253
+ + NPI+ + I SA Y K + SV I S+ PV+
Sbjct: 115 SSVGSRNPIHTSSYMTGIWVWLINISATYICYAFGKFSCKVMIQSVSFAFPINLSV-PVL 173
Query: 254 MAGIIAIYGL 283
++G+IA+ G+
Sbjct: 174 LSGLIAMCGM 183
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 21.4 bits (43), Expect = 5.2
Identities = 18/70 (25%), Positives = 30/70 (42%)
Frame = +2
Query: 74 NKMAENNPIYGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVV 253
+ + NPI+ + I SA Y K + SV I S+ PV+
Sbjct: 348 SSVGSRNPIHTSSYMTGIWVWLINISATYICYAFGKFSCKVMIQSVSFAFPINLSV-PVL 406
Query: 254 MAGIIAIYGL 283
++G+IA+ G+
Sbjct: 407 LSGLIAMCGM 416
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
CHS2 protein.
Length = 1464
Score = 21.4 bits (43), Expect = 5.2
Identities = 18/70 (25%), Positives = 30/70 (42%)
Frame = +2
Query: 74 NKMAENNPIYGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVV 253
+ + NPI+ + I SA Y K + SV I S+ PV+
Sbjct: 348 SSVGSRNPIHTSSYMTGIWVWLINISATYICYAFGKFSCKVMIQSVSFAFPINLSV-PVL 406
Query: 254 MAGIIAIYGL 283
++G+IA+ G+
Sbjct: 407 LSGLIAMCGM 416
>AM292341-1|CAL23153.2| 393|Tribolium castaneum gustatory receptor
candidate 20 protein.
Length = 393
Score = 21.0 bits (42), Expect = 6.9
Identities = 10/32 (31%), Positives = 15/32 (46%)
Frame = +2
Query: 245 PVVMAGIIAIYGLVVAVLIAGALQEPANYPLY 340
P+V I+ G V ++AG L P P +
Sbjct: 80 PIVKYIILIDLGEVAVTVLAGILTTPFKLPYF 111
>AM292381-1|CAL23193.2| 364|Tribolium castaneum gustatory receptor
candidate 60 protein.
Length = 364
Score = 20.6 bits (41), Expect = 9.2
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +2
Query: 470 MILILIFAEVLGLYGLI 520
MIL+L+ LGL GLI
Sbjct: 1 MILVLLVIVNLGLNGLI 17
>AM292351-1|CAL23163.2| 394|Tribolium castaneum gustatory receptor
candidate 30 protein.
Length = 394
Score = 20.6 bits (41), Expect = 9.2
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = -1
Query: 508 KTQYFSENKNKNHS 467
+TQ SE+KNK+ S
Sbjct: 251 RTQSMSESKNKSES 264
>AM292350-1|CAL23162.2| 429|Tribolium castaneum gustatory receptor
candidate 29 protein.
Length = 429
Score = 20.6 bits (41), Expect = 9.2
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = -1
Query: 508 KTQYFSENKNKNHS 467
+TQ SE+KNK+ S
Sbjct: 251 RTQSMSESKNKSES 264
>AM292328-1|CAL23140.2| 429|Tribolium castaneum gustatory receptor
candidate 7 protein.
Length = 429
Score = 20.6 bits (41), Expect = 9.2
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = -1
Query: 508 KTQYFSENKNKNHS 467
+TQ SE+KNK+ S
Sbjct: 251 RTQSMSESKNKSES 264
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,068
Number of Sequences: 336
Number of extensions: 3372
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13201902
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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