Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt5b11
         (669 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.            51   3e-08
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            50   9e-08
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           42   2e-05
AF444782-1|AAL37903.1|  576|Anopheles gambiae Toll9 protein.           28   0.31 
AJ439353-7|CAD27929.1|  555|Anopheles gambiae putative glycerol ...    26   0.93 
AF457548-1|AAL68778.1|  178|Anopheles gambiae antigen 5-related ...    24   3.8  
U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles ...    24   5.0  
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    23   6.6  
AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcript...    23   6.6  

>AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.
          Length = 1152

 Score = 51.2 bits (117), Expect = 3e-08
 Identities = 40/127 (31%), Positives = 64/127 (50%)
 Frame = +3

Query: 285 NRIAISFKSNRVIEIEDDAFRNIPRLVYLDLSNNKISGQVLRSEIFQGPYEDGIYREIAL 464
           +R+AIS  + ++ +I  D F ++P L +LD+ +N      L + IF     D + +   L
Sbjct: 162 DRLAIS--NAKLSDIGPDLFEHLPNLTWLDMRDNIFR---LPATIF-----DALPK---L 208

Query: 465 ETLNLGYNEIHSLDRYLFKYTPNLTRLYLNNNPIEILDHVSILAISSATNLEVLDLSKTD 644
             L L +N +  LD  L ++ PNL  L L +N +  L      A +    LE LDLS   
Sbjct: 209 RVLELSFNSLEELDPRLLRHLPNLRLLTLWHNKLRTLSRA---AFAGVPELERLDLSSNQ 265

Query: 645 IDSIPLD 665
           ++S+P D
Sbjct: 266 LESVPGD 272



 Score = 35.5 bits (78), Expect = 0.002
 Identities = 31/130 (23%), Positives = 62/130 (47%), Gaps = 2/130 (1%)
 Frame = +3

Query: 285 NRIAISFKSNRVIEIEDDAFRNIPRLVYLDLSNNKISGQVLRSEIFQGPYEDGIYREIAL 464
           N   ++  +NR+ ++ +D  R+   L  L L +N+++G  L + + +   E        L
Sbjct: 353 NLTQLNLANNRLHQLPEDLLRDQKALQVLQLQHNQLTG--LPAGLLRNTVE--------L 402

Query: 465 ETLNLGYNEIHSLDRYLFKYTPNLTRLYLNNNPIEILD-HVSILAISSAT-NLEVLDLSK 638
            TL L +N+I  L     +    L  LYL++N +  ++ H      +  T +L+V  L+ 
Sbjct: 403 HTLRLSHNQIGELSAVALQALTKLQELYLDHNQLYTIELHAFKQTTALHTLHLQVNQLAF 462

Query: 639 TDIDSIPLDA 668
             ++++P  A
Sbjct: 463 ETLNTLPATA 472


>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 49.6 bits (113), Expect = 9e-08
 Identities = 43/144 (29%), Positives = 69/144 (47%), Gaps = 1/144 (0%)
 Frame = +3

Query: 228 VTFFNNSITNITQLSPIPGNRIAI-SFKSNRVIEIEDDAFRNIPRLVYLDLSNNKISGQV 404
           V   NN ++ +   +    N +A+ S   NR+  I+  A RN   L  L L+ NK     
Sbjct: 386 VILSNNRLSTVDHFTFSGLNSLALLSLDYNRISRIDRQALRNHSALQELHLNGNK----- 440

Query: 405 LRSEIFQGPYEDGIYREIALETLNLGYNEIHSLDRYLFKYTPNLTRLYLNNNPIEILDHV 584
               + Q P  D +Y    L TL+LG N I ++D   F++  +L  L L  N IEI+   
Sbjct: 441 ----LLQVP--DALYDVPLLRTLDLGENHISNIDNASFRHMAHLYGLRLTENNIEIIRRG 494

Query: 585 SILAISSATNLEVLDLSKTDIDSI 656
           +  A+ S   L +L+LS+  + ++
Sbjct: 495 TFEAMKS---LHILNLSQNRLKTV 515



 Score = 35.9 bits (79), Expect = 0.001
 Identities = 35/143 (24%), Positives = 63/143 (44%), Gaps = 1/143 (0%)
 Frame = +3

Query: 228 VTFFNNSITNITQLSPIPGNRIA-ISFKSNRVIEIEDDAFRNIPRLVYLDLSNNKISGQV 404
           ++ F+ S +  T+LS   G+ I  +    N +  +    F  + +L  L L +N ++   
Sbjct: 191 LSVFHFSASLSTRLSKKCGSSIVTLDLPQNTIDNLPPAIFSGLGKLTDLRLQSNGLN--Y 248

Query: 405 LRSEIFQGPYEDGIYREIALETLNLGYNEIHSLDRYLFKYTPNLTRLYLNNNPIEILDHV 584
           +    F+G         ++L  L L  N + +L   LF    ++  +YL NN + +L   
Sbjct: 249 IADRAFEGL--------VSLSRLELSLNRLTNLPPELFSEAKHIKEIYLQNNSLNVL--- 297

Query: 585 SILAISSATNLEVLDLSKTDIDS 653
           +    S    L VLDLS  ++ S
Sbjct: 298 APGIFSDLKQLLVLDLSNNELTS 320



 Score = 29.9 bits (64), Expect = 0.076
 Identities = 17/40 (42%), Positives = 21/40 (52%)
 Frame = +3

Query: 459 ALETLNLGYNEIHSLDRYLFKYTPNLTRLYLNNNPIEILD 578
           ++E L L  N I  +  Y F   PNLTR+ L  N I  LD
Sbjct: 617 SVELLYLNDNLISKVQSYTFFKKPNLTRVDLFGNKITTLD 656



 Score = 27.5 bits (58), Expect = 0.40
 Identities = 12/44 (27%), Positives = 25/44 (56%)
 Frame = +3

Query: 297 ISFKSNRVIEIEDDAFRNIPRLVYLDLSNNKISGQVLRSEIFQG 428
           I  ++N +  +    F ++ +L+ LDLSNN+++ + +    F G
Sbjct: 287 IYLQNNSLNVLAPGIFSDLKQLLVLDLSNNELTSEWINPATFPG 330


>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 41.9 bits (94), Expect = 2e-05
 Identities = 30/88 (34%), Positives = 46/88 (52%)
 Frame = +3

Query: 327 IEDDAFRNIPRLVYLDLSNNKISGQVLRSEIFQGPYEDGIYREIALETLNLGYNEIHSLD 506
           +  D F  + RLV L+L++NKI+   L SEIF   Y         L+ LNL +N++  + 
Sbjct: 359 VNRDTFAGLIRLVLLNLASNKIT--KLESEIFSDLY--------TLQILNLRHNQLEIIA 408

Query: 507 RYLFKYTPNLTRLYLNNNPIEILDHVSI 590
              F    NL  L L++N ++ LD  S+
Sbjct: 409 ADTFSPMNNLHTLLLSHNKLKYLDAYSL 436



 Score = 39.9 bits (89), Expect = 7e-05
 Identities = 31/124 (25%), Positives = 65/124 (52%)
 Frame = +3

Query: 291 IAISFKSNRVIEIEDDAFRNIPRLVYLDLSNNKISGQVLRSEIFQGPYEDGIYREIALET 470
           + ++  SN++ ++E + F ++  L  L+L +N++  +++ ++ F  P  +       L T
Sbjct: 371 VLLNLASNKITKLESEIFSDLYTLQILNLRHNQL--EIIAADTFS-PMNN-------LHT 420

Query: 471 LNLGYNEIHSLDRYLFKYTPNLTRLYLNNNPIEILDHVSILAISSATNLEVLDLSKTDID 650
           L L +N++  LD Y       L+ L L+NN    L  V   A  + ++L+ L+L+  ++ 
Sbjct: 421 LLLSHNKLKYLDAYSLNGLYALSLLSLDNN---ALTGVHPEAFRNCSSLQDLNLNGNELT 477

Query: 651 SIPL 662
            +PL
Sbjct: 478 QVPL 481



 Score = 38.3 bits (85), Expect = 2e-04
 Identities = 46/174 (26%), Positives = 81/174 (46%), Gaps = 4/174 (2%)
 Frame = +3

Query: 147 NCSR-RDIVKIPNWPEQINNISKDGHVL--VTFFNNSITNITQLSPIPGNRI-AISFKSN 314
           NCS  +D+    N   Q+    KD  +L  V    NSI+ I +      N +  +   SN
Sbjct: 462 NCSSLQDLNLNGNELTQVPLALKDMRLLRTVDLGENSISVIEEPGFRGMNNLYGLRLISN 521

Query: 315 RVIEIEDDAFRNIPRLVYLDLSNNKISGQVLRSEIFQGPYEDGIYREIALETLNLGYNEI 494
            +      AF+++P L  L+++ NKI      S I +G +E      ++++ + L  N +
Sbjct: 522 NIENFTRKAFKDLPSLQILNVARNKI------SYIEKGAFEPA----VSVQAIRLDGNLL 571

Query: 495 HSLDRYLFKYTPNLTRLYLNNNPIEILDHVSILAISSATNLEVLDLSKTDIDSI 656
             +D  L    PNL  L +++N +E  D+  I      T+L+ LDL + ++  +
Sbjct: 572 SDIDG-LLTSMPNLVWLNISDNKLEHFDYSHI-----PTHLQWLDLHRNELTEL 619



 Score = 28.7 bits (61), Expect = 0.18
 Identities = 20/68 (29%), Positives = 32/68 (47%)
 Frame = +3

Query: 462 LETLNLGYNEIHSLDRYLFKYTPNLTRLYLNNNPIEILDHVSILAISSATNLEVLDLSKT 641
           LE L++  N    L    F     L  L +++N I +   V   A+S    L++LDLS  
Sbjct: 247 LEDLDVSRNHFVLLPAAGFGMLKRLKMLKIHDNEISM---VGDKALSGLNELQILDLSSN 303

Query: 642 DIDSIPLD 665
            + ++P D
Sbjct: 304 KLVALPTD 311



 Score = 28.7 bits (61), Expect = 0.18
 Identities = 23/90 (25%), Positives = 40/90 (44%)
 Frame = +3

Query: 297 ISFKSNRVIEIEDDAFRNIPRLVYLDLSNNKISGQVLRSEIFQGPYEDGIYREIALETLN 476
           +    N +  + D A   +  L  LDLS+NK+    L +++F+ P +       +++ + 
Sbjct: 274 LKIHDNEISMVGDKALSGLNELQILDLSSNKL--VALPTDLFRDPAQ-------SIQEIY 324

Query: 477 LGYNEIHSLDRYLFKYTPNLTRLYLNNNPI 566
           L  N I  L   LF     L  L L+ N +
Sbjct: 325 LQNNSISVLSPGLFSKLEQLQALDLSQNQL 354



 Score = 25.8 bits (54), Expect = 1.2
 Identities = 13/24 (54%), Positives = 14/24 (58%)
 Frame = +3

Query: 321 IEIEDDAFRNIPRLVYLDLSNNKI 392
           +EIE DAF     L  LDLS N I
Sbjct: 160 LEIEADAFGQTRNLEVLDLSTNNI 183



 Score = 25.4 bits (53), Expect = 1.6
 Identities = 12/22 (54%), Positives = 14/22 (63%)
 Frame = +3

Query: 594 AISSATNLEVLDLSKTDIDSIP 659
           A     NLEVLDLS  +I S+P
Sbjct: 166 AFGQTRNLEVLDLSTNNIWSLP 187



 Score = 25.4 bits (53), Expect = 1.6
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +3

Query: 306 KSNRVIEIEDDAFRNIPRLVYLDLSNNKIS 395
           + NR+  IED  F  + +L  L L  N+I+
Sbjct: 907 QGNRIAYIEDHTFAELRKLEVLRLDGNRIT 936


>AF444782-1|AAL37903.1|  576|Anopheles gambiae Toll9 protein.
          Length = 576

 Score = 27.9 bits (59), Expect = 0.31
 Identities = 18/57 (31%), Positives = 26/57 (45%)
 Frame = +3

Query: 405 LRSEIFQGPYEDGIYREIALETLNLGYNEIHSLDRYLFKYTPNLTRLYLNNNPIEIL 575
           LR  I +    +       LE L+L YN I + ++ +   T  L  + L NN I IL
Sbjct: 187 LRGNILRMLQRESFANLTNLEQLDLSYNYISAWNQQILTTTTALQSVNLRNNSIVIL 243



 Score = 25.0 bits (52), Expect = 2.2
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = +3

Query: 321 IEIEDDAFRNIPRLVYLDLSNNKISGQ 401
           +++  D F  +  LV+LDLSN ++  Q
Sbjct: 72  VDLHQDIFFPLISLVFLDLSNTRLEYQ 98


>AJ439353-7|CAD27929.1|  555|Anopheles gambiae putative glycerol
           kinase protein.
          Length = 555

 Score = 26.2 bits (55), Expect = 0.93
 Identities = 11/37 (29%), Positives = 21/37 (56%)
 Frame = +3

Query: 546 YLNNNPIEILDHVSILAISSATNLEVLDLSKTDIDSI 656
           +  +NP+E+L+ V + A+ +   +E L     DI +I
Sbjct: 49  WTEHNPVEVLEAVRLCAVEACHQVEKLGFLVKDIAAI 85


>AF457548-1|AAL68778.1|  178|Anopheles gambiae antigen 5-related 1
           protein protein.
          Length = 178

 Score = 24.2 bits (50), Expect = 3.8
 Identities = 14/46 (30%), Positives = 21/46 (45%), Gaps = 3/46 (6%)
 Frame = -1

Query: 552 LSTISLSSAYI*TNICPMSGSHYNQD*VSPK---QSHGRSHLRKVL 424
           LS +S+   Y  +++CP  G H   +  S        G+   RKVL
Sbjct: 15  LSVVSVGGQYCSSDLCPRGGPHVGCNPPSSSGGPTCQGKQKARKVL 60


>U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles
           gambiae putativetubulin alpha chain mRNA, complete cds.
           ).
          Length = 91

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 8/18 (44%), Positives = 14/18 (77%)
 Frame = +1

Query: 604 APRI*RFSTCPKPISTVY 657
           +PR+ + STCP P S+++
Sbjct: 53  SPRLAQASTCPVPCSSIW 70


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score = 23.4 bits (48), Expect = 6.6
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = +2

Query: 200 QHKQRWSRPSDVFQQQHYKYNATESDTG 283
           +HK++W+  SD       KYN+     G
Sbjct: 522 KHKEKWTAISDTGVPVDVKYNSHSQSIG 549


>AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcriptase
            protein.
          Length = 988

 Score = 23.4 bits (48), Expect = 6.6
 Identities = 9/28 (32%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
 Frame = +3

Query: 93   APSAP-CDISVEDTSNLTLNCSRRDIVK 173
            +P+ P C  +VED  ++  +C R D ++
Sbjct: 935  SPNCPECGDAVEDVEHVLFHCPRSDRIR 962


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 674,814
Number of Sequences: 2352
Number of extensions: 12671
Number of successful extensions: 48
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 46
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66904800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)