Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt5b02
         (491 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    23   1.5  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    23   2.0  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    21   4.6  

>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = +1

Query: 22  SSAGLHSGRQRASCTPSP 75
           S  G H G   A+C PSP
Sbjct: 83  SYTGYHLGSYAANCPPSP 100


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 22.6 bits (46), Expect = 2.0
 Identities = 17/59 (28%), Positives = 23/59 (38%)
 Frame = +3

Query: 21  QFSWAPQWTTAGFMYAFSFFYNLGPATIPFVIAAEFFVPEVRGLCNCLINACTWLMNFV 197
           +  W  Q  T         F N     +P   AA FF  E   + + L  ACT+L+  V
Sbjct: 290 EMRWYCQTATMEEKQELYEFSNFVSQHLPKFSAANFFDIERSTILSVLGTACTFLIIIV 348


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 21.4 bits (43), Expect = 4.6
 Identities = 10/36 (27%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
 Frame = +3

Query: 282 AVFCQFY--LPETKGMPIEAIPLLFIKKDKRRHYNI 383
           A+ C  Y  +P+ K   + ++P L +   +  HY+I
Sbjct: 206 AISCARYRFMPDIKKKGLHSLPRLVLFTSEDAHYSI 241


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,999
Number of Sequences: 336
Number of extensions: 1802
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11525470
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)