Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt5b02
(491 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC2H8.02 |||inorganic phosphate transporter|Schizosaccharomyce... 41 1e-04
SPCC548.07c |ght1||hexose transporter Ght1 |Schizosaccharomyces ... 33 0.023
SPAC23D3.12 |||inorganic phosphate transporter |Schizosaccharomy... 33 0.023
SPBC4B4.08 |ght2||hexose transporter Ght2 |Schizosaccharomyces p... 33 0.031
SPAC2F7.07c |||histone deacetylase complex subunit Rco1 |Schizos... 31 0.071
SPBC8E4.01c ||SPBP4G3.01|inorganic phosphate transporter |Schizo... 31 0.094
SPBC1683.01 |||inorganic phosphate transporter |Schizosaccharomy... 31 0.094
SPAC1F8.01 |ght3||hexose transporter Ght3 |Schizosaccharomyces p... 30 0.16
SPAC20G8.03 |itr2||MFS myo-inositol transporter|Schizosaccharomy... 30 0.16
SPBC1683.08 |ght4||hexose transporter Ght4 |Schizosaccharomyces ... 27 2.0
SPAC343.19 ||SPAC824.01|phosphatidylinositol 4-kinase Lsb6 |Schi... 25 4.7
SPAC16E8.06c |nop12||RNA-binding protein Nop12|Schizosaccharomyc... 25 6.2
SPAC694.06c |mrc1||mediator of replication checkpoint 1 |Schizos... 25 6.2
SPCC1682.11c |||DUF580 family protein|Schizosaccharomyces pombe|... 25 8.2
SPBC17D1.07c |||GTPase regulator |Schizosaccharomyces pombe|chr ... 25 8.2
>SPCC2H8.02 |||inorganic phosphate transporter|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 583
Score = 40.7 bits (91), Expect = 1e-04
Identities = 29/93 (31%), Positives = 39/93 (41%)
Frame = +3
Query: 75 FFYNLGPATIPFVIAAEFFVPEVRGLCNCLINACTWLMNFVTLQLFSQLVDWVGLAPXXX 254
FF+N GP T FVI AE F VR + + AC ++ LF++L + +G
Sbjct: 468 FFFNFGPNTTCFVIPAEVFPSRVRAFSHGICAACGKAGAILSALLFNKLTEVIGFGNVLW 527
Query: 255 XXXXXXXXXAVFCQFYLPETKGMPIEAIPLLFI 353
AV LPET + I L I
Sbjct: 528 IFFGCMVAGAV-VTLILPETANRDADLIDRLEI 559
>SPCC548.07c |ght1||hexose transporter Ght1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 557
Score = 33.1 bits (72), Expect = 0.023
Identities = 23/102 (22%), Positives = 40/102 (39%)
Frame = +3
Query: 60 MYAFSFFYNLGPATIPFVIAAEFFVPEVRGLCNCLINACTWLMNFVTLQLFSQLVDWVGL 239
++ FSF GPA +VI E + R C + WL NF+ + + +G
Sbjct: 374 LFIFSFAQTWGPAA--YVIVGESYPIRYRSKCAAVATTSNWLWNFLISFFTPFITNSIGF 431
Query: 240 APXXXXXXXXXXXXAVFCQFYLPETKGMPIEAIPLLFIKKDK 365
++ + E+KG+ +E I L++ K
Sbjct: 432 -KYGYIFASCNLCASIVTFLFAHESKGLTLEEINELYLSDAK 472
>SPAC23D3.12 |||inorganic phosphate transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 559
Score = 33.1 bits (72), Expect = 0.023
Identities = 33/108 (30%), Positives = 40/108 (37%), Gaps = 3/108 (2%)
Frame = +3
Query: 3 LMATQLQFSWAPQWTTAGFMYAF---SFFYNLGPATIPFVIAAEFFVPEVRGLCNCLINA 173
LM L SW +T G F FF N GP F+ AE F VRG + L A
Sbjct: 421 LMFAILAGSW-DTISTGGRFACFVIAQFFSNFGPNATTFLYPAEVFPARVRGTAHGLSAA 479
Query: 174 CTWLMNFVTLQLFSQLVDWVGLAPXXXXXXXXXXXXAVFCQFYLPETK 317
+ LF+ L +G A+F LPETK
Sbjct: 480 LGKCGAILASLLFNFLTSVIGYG-NVMWIFCGCMWGAIFFTLLLPETK 526
>SPBC4B4.08 |ght2||hexose transporter Ght2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 531
Score = 32.7 bits (71), Expect = 0.031
Identities = 23/98 (23%), Positives = 38/98 (38%)
Frame = +3
Query: 60 MYAFSFFYNLGPATIPFVIAAEFFVPEVRGLCNCLINACTWLMNFVTLQLFSQLVDWVGL 239
++ F F PA +VI E + R C + A WL NF+ + F+ +
Sbjct: 378 LFIFGFAQTWAPAA--YVIVGESYPVRYRSKCAAVATASNWLWNFL-ISFFTPFIQASIG 434
Query: 240 APXXXXXXXXXXXXAVFCQFYLPETKGMPIEAIPLLFI 353
A+ + ETKG+ +E I L++
Sbjct: 435 FKYGYVFASCNLTGAIVIFLFAKETKGLTLEEINELYM 472
>SPAC2F7.07c |||histone deacetylase complex subunit Rco1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 607
Score = 31.5 bits (68), Expect = 0.071
Identities = 12/29 (41%), Positives = 22/29 (75%)
Frame = +1
Query: 310 RLRVCPSKPFRCSSLRKIREDIIISNKLM 396
++RV PSKPF+ + L +IR+++I K++
Sbjct: 506 KIRVVPSKPFKLNFLEQIRDNVINLRKMV 534
>SPBC8E4.01c ||SPBP4G3.01|inorganic phosphate transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 572
Score = 31.1 bits (67), Expect = 0.094
Identities = 28/97 (28%), Positives = 37/97 (38%), Gaps = 2/97 (2%)
Frame = +3
Query: 78 FYNLGPATIPFVIAAEFFVPEVRGLCNCLINACTWLMNFVTLQLFSQLVDWVGLAPXXXX 257
F N GP + F+ AE F VRG + + A + LF+ L +G
Sbjct: 459 FSNFGPNSTTFIYPAEVFPARVRGTAHGVSAALGKCGAILASLLFNFLTGVIGYGNVMWI 518
Query: 258 XXXXXXXXAVFCQFYLPETKGMPIEAIPL--LFIKKD 362
+F LPETKG + I LF KD
Sbjct: 519 FCGCMWGGILF-TLLLPETKGRDADEIDRLELFYGKD 554
>SPBC1683.01 |||inorganic phosphate transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 573
Score = 31.1 bits (67), Expect = 0.094
Identities = 24/87 (27%), Positives = 33/87 (37%)
Frame = +3
Query: 78 FYNLGPATIPFVIAAEFFVPEVRGLCNCLINACTWLMNFVTLQLFSQLVDWVGLAPXXXX 257
F N GP + F+ AE F VRG + + A + LF+ L +G
Sbjct: 460 FSNFGPNSTTFIYPAEVFPARVRGTAHGISAALGKCGAILASLLFNFLTSIIGYGNVMWI 519
Query: 258 XXXXXXXXAVFCQFYLPETKGMPIEAI 338
+F LPETKG + I
Sbjct: 520 FCGCMWGGILF-TLLLPETKGRDADEI 545
>SPAC1F8.01 |ght3||hexose transporter Ght3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 555
Score = 30.3 bits (65), Expect = 0.16
Identities = 25/103 (24%), Positives = 46/103 (44%), Gaps = 1/103 (0%)
Frame = +3
Query: 60 MYAFSFFYNLGPATIPFVIAAEFFVPEVRGLCNCLINACTWLMNFVTLQLFSQLVDWVGL 239
++ FS+ + GP + +VI E F R C + + WL NF+ + F+ ++ +
Sbjct: 374 LFLFSYCCSWGP--MGWVIVGETFPIRYRSKCASVATSGNWLGNFM-ISFFTPFIN-NAI 429
Query: 240 APXXXXXXXXXXXXAVFCQFYL-PETKGMPIEAIPLLFIKKDK 365
+ F F+L ETKG+ +E + L++ K
Sbjct: 430 GFKLGYIYACINLFSSFMIFFLAKETKGLTLEEVNDLYMSNIK 472
>SPAC20G8.03 |itr2||MFS myo-inositol transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 557
Score = 30.3 bits (65), Expect = 0.16
Identities = 28/106 (26%), Positives = 37/106 (34%)
Frame = +3
Query: 39 QWTTAGFMYAFSFFYNLGPATIPFVIAAEFFVPEVRGLCNCLINACTWLMNFVTLQLFSQ 218
Q+ + F Y G IP+ AE F EVR L A W+ N + F
Sbjct: 432 QYVVLASIIIFLASYASGIGNIPWQ-QAELFPMEVRALGAGFSTAINWVGNLIISASFLT 490
Query: 219 LVDWVGLAPXXXXXXXXXXXXAVFCQFYLPETKGMPIEAIPLLFIK 356
+++ + V F PE GM IE I L K
Sbjct: 491 MMESITPTGTFALFAGFCFVGLVTSYFTYPELAGMSIENIHKLLEK 536
>SPBC1683.08 |ght4||hexose transporter Ght4 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 557
Score = 26.6 bits (56), Expect = 2.0
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = +3
Query: 60 MYAFSFFYNLGPATIPFVIAAEFFVPEVRGLCNCLINACTWLMNFV 197
++ FS+ + GP + +VI E F R C + + WL NF+
Sbjct: 374 LFLFSYCCSWGP--MGWVIVGETFPIRYRSKCAAVATSGNWLGNFM 417
>SPAC343.19 ||SPAC824.01|phosphatidylinositol 4-kinase Lsb6
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 624
Score = 25.4 bits (53), Expect = 4.7
Identities = 11/24 (45%), Positives = 16/24 (66%), Gaps = 3/24 (12%)
Frame = -1
Query: 179 STGVDQTIAQTSDFW---HKELGS 117
+ VD I+QTSDFW H ++G+
Sbjct: 386 ANSVDPAISQTSDFWKGPHFQIGA 409
>SPAC16E8.06c |nop12||RNA-binding protein Nop12|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 438
Score = 25.0 bits (52), Expect = 6.2
Identities = 14/56 (25%), Positives = 23/56 (41%)
Frame = +2
Query: 101 DSVRDRCRVLCARSPRSVQLFDQRLYLAHEFCDASIILTTRRLGRPGSSLLPLQFL 268
DS+R R PR V F+++ + + +A I+ R SL F+
Sbjct: 196 DSIRFRSLAFSEAIPRKVAFFEKKFHSERDTVNAYIVFRDSSSARSALSLNGTMFM 251
>SPAC694.06c |mrc1||mediator of replication checkpoint 1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1019
Score = 25.0 bits (52), Expect = 6.2
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -1
Query: 356 LNEEQRNGFDGHTLSLRQVKLTKD 285
L+EE +G G L ++KL+KD
Sbjct: 374 LSEENEHGIKGKLKQLAEIKLSKD 397
>SPCC1682.11c |||DUF580 family protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 574
Score = 24.6 bits (51), Expect = 8.2
Identities = 16/60 (26%), Positives = 26/60 (43%), Gaps = 4/60 (6%)
Frame = +3
Query: 45 TTAGFMYAFSFFY----NLGPATIPFVIAAEFFVPEVRGLCNCLINACTWLMNFVTLQLF 212
T A F Y+F + N+ PAT P+ + F + C++ + WL V + F
Sbjct: 152 TLALFTYSFLMVWRTNPNIPPATSPYAAIQKAFPLFHKDAIICMMLSVIWLFCLVAIPRF 211
>SPBC17D1.07c |||GTPase regulator |Schizosaccharomyces pombe|chr
2|||Manual
Length = 962
Score = 24.6 bits (51), Expect = 8.2
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = +3
Query: 27 SWAPQWTTAGFMYAFSF 77
SWA + T GF YA SF
Sbjct: 430 SWASRLFTKGFWYAISF 446
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,699,534
Number of Sequences: 5004
Number of extensions: 28990
Number of successful extensions: 77
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 77
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 77
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 192109570
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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