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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt5a02
         (703 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    26   0.26 
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    26   0.26 
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    26   0.26 
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    26   0.26 
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    26   0.26 
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           26   0.26 
AF264695-1|AAG13009.1|  100|Tribolium castaneum cephalothorax pr...    26   0.26 
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    26   0.26 
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    26   0.26 
X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.       25   0.60 
AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain tran...    25   0.60 
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          25   0.60 
AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    25   0.60 
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    25   0.60 
AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    25   0.79 
AF146649-1|AAD38009.1|   96|Tribolium castaneum ultrathorax prot...    25   0.79 
U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    24   1.0  
EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    24   1.0  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    24   1.0  
X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          23   1.8  
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           23   1.8  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    22   4.2  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    22   4.2  
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    22   5.6  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   7.4  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    21   7.4  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    21   7.4  
AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like pr...    21   9.7  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   9.7  

>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 26.2 bits (55), Expect = 0.26
 Identities = 9/26 (34%), Positives = 17/26 (65%)
 Frame = +3

Query: 57  QIT*PLCCTNQMICVWYKHRSLKYLK 134
           +I   LC T + I +W+++R +K+ K
Sbjct: 252 EIAHALCLTERQIKIWFQNRRMKWKK 277


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 26.2 bits (55), Expect = 0.26
 Identities = 9/26 (34%), Positives = 17/26 (65%)
 Frame = +3

Query: 57  QIT*PLCCTNQMICVWYKHRSLKYLK 134
           +I   LC T + I +W+++R +K+ K
Sbjct: 252 EIAHALCLTERQIKIWFQNRRMKWKK 277


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 26.2 bits (55), Expect = 0.26
 Identities = 9/26 (34%), Positives = 17/26 (65%)
 Frame = +3

Query: 57  QIT*PLCCTNQMICVWYKHRSLKYLK 134
           +I   LC T + I +W+++R +K+ K
Sbjct: 274 EIAHALCLTERQIKIWFQNRRMKWKK 299


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 26.2 bits (55), Expect = 0.26
 Identities = 9/26 (34%), Positives = 17/26 (65%)
 Frame = +3

Query: 57  QIT*PLCCTNQMICVWYKHRSLKYLK 134
           +I   LC T + I +W+++R +K+ K
Sbjct: 252 EIAHALCLTERQIKIWFQNRRMKWKK 277


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 26.2 bits (55), Expect = 0.26
 Identities = 9/26 (34%), Positives = 17/26 (65%)
 Frame = +3

Query: 57  QIT*PLCCTNQMICVWYKHRSLKYLK 134
           +I   LC T + I +W+++R +K+ K
Sbjct: 208 EIAHALCLTERQIKIWFQNRRMKWKK 233


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 26.2 bits (55), Expect = 0.26
 Identities = 9/26 (34%), Positives = 17/26 (65%)
 Frame = +3

Query: 57  QIT*PLCCTNQMICVWYKHRSLKYLK 134
           +I   LC T + I +W+++R +K+ K
Sbjct: 252 EIAHALCLTERQIKIWFQNRRMKWKK 277


>AF264695-1|AAG13009.1|  100|Tribolium castaneum cephalothorax
           protein.
          Length = 100

 Score = 26.2 bits (55), Expect = 0.26
 Identities = 9/26 (34%), Positives = 17/26 (65%)
 Frame = +3

Query: 57  QIT*PLCCTNQMICVWYKHRSLKYLK 134
           +I   LC T + I +W+++R +K+ K
Sbjct: 40  EIAHALCLTERQIKIWFQNRRMKWKK 65


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 26.2 bits (55), Expect = 0.26
 Identities = 9/26 (34%), Positives = 17/26 (65%)
 Frame = +3

Query: 57  QIT*PLCCTNQMICVWYKHRSLKYLK 134
           +I   LC T + I +W+++R +K+ K
Sbjct: 276 EIAHALCLTERQIKIWFQNRRMKWKK 301


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 26.2 bits (55), Expect = 0.26
 Identities = 9/26 (34%), Positives = 17/26 (65%)
 Frame = +3

Query: 57  QIT*PLCCTNQMICVWYKHRSLKYLK 134
           +I   LC T + I +W+++R +K+ K
Sbjct: 252 EIAHALCLTERQIKIWFQNRRMKWKK 277


>X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.
          Length = 133

 Score = 25.0 bits (52), Expect = 0.60
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = +3

Query: 57  QIT*PLCCTNQMICVWYKHRSLKYLK 134
           +I   LC T + I +W+++R +K  K
Sbjct: 38  EIAHALCLTERQIKIWFQNRRMKLKK 63


>AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain
           transcription factor Zen2 protein.
          Length = 243

 Score = 25.0 bits (52), Expect = 0.60
 Identities = 14/59 (23%), Positives = 28/59 (47%)
 Frame = +3

Query: 42  RPTWPQIT*PLCCTNQMICVWYKHRSLKYLKMRSCCAWTAWVSAGQTSTTGRRVNADTS 218
           RP   Q+   L  T + I +W+++R +K+ K       T   S  + S + +  +++ S
Sbjct: 112 RPRRIQMAQNLNLTERQIKIWFQNRRMKFKKEEKNKVVTPKTSPNEASMSPQSTSSNNS 170


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 25.0 bits (52), Expect = 0.60
 Identities = 14/59 (23%), Positives = 28/59 (47%)
 Frame = +3

Query: 42  RPTWPQIT*PLCCTNQMICVWYKHRSLKYLKMRSCCAWTAWVSAGQTSTTGRRVNADTS 218
           RP   Q+   L  T + I +W+++R +K+ K       T   S  + S + +  +++ S
Sbjct: 132 RPRRIQMAQNLNLTERQIKIWFQNRRMKFKKEEKNKVVTPKTSPNEASMSPQSTSSNNS 190


>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 25.0 bits (52), Expect = 0.60
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = +3

Query: 57  QIT*PLCCTNQMICVWYKHRSLKYLK 134
           +I   LC T + I +W+++R +K  K
Sbjct: 189 EIAHALCLTERQIKIWFQNRRMKLKK 214


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 25.0 bits (52), Expect = 0.60
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = +3

Query: 57  QIT*PLCCTNQMICVWYKHRSLKYLK 134
           +I   LC T + I +W+++R +K  K
Sbjct: 248 EIAHALCLTERQIKIWFQNRRMKLKK 273


>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 24.6 bits (51), Expect = 0.79
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +3

Query: 72  LCCTNQMICVWYKHRSLKYLK 134
           LC T + I +W+++R +K  K
Sbjct: 260 LCLTERQIKIWFQNRRMKLKK 280


>AF146649-1|AAD38009.1|   96|Tribolium castaneum ultrathorax
           protein.
          Length = 96

 Score = 24.6 bits (51), Expect = 0.79
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +3

Query: 72  LCCTNQMICVWYKHRSLKYLK 134
           LC T + I +W+++R +K  K
Sbjct: 42  LCLTERQIKIWFQNRRMKLKK 62


>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 11/39 (28%), Positives = 19/39 (48%)
 Frame = +3

Query: 39  ARPTWPQIT*PLCCTNQMICVWYKHRSLKYLKMRSCCAW 155
           +RP   ++   L      I VW+++R +K  + R   AW
Sbjct: 97  SRPRRCELAAQLNLPESTIKVWFQNRRMKDKRQRMAIAW 135


>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +2

Query: 284 VKNLTVGDRVAIEPGVPCRYCE 349
           + N+  GDR  +EP +   +CE
Sbjct: 75  IHNVDCGDRTQLEPPISSPHCE 96


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +2

Query: 284 VKNLTVGDRVAIEPGVPCRYCE 349
           + N+  GDR  +EP +   +CE
Sbjct: 75  IHNVDCGDRTQLEPPISSPHCE 96


>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 13/51 (25%), Positives = 27/51 (52%)
 Frame = +3

Query: 39  ARPTWPQIT*PLCCTNQMICVWYKHRSLKYLKMRSCCAWTAWVSAGQTSTT 191
           +RP   QI   L  + + I +W+++R +K+ K +     T   S  +T+++
Sbjct: 114 SRPRRIQIAENLNLSERQIKIWFQNRRMKHKKEQMNKVSTPRSSPAETASS 164


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 13/51 (25%), Positives = 27/51 (52%)
 Frame = +3

Query: 39  ARPTWPQIT*PLCCTNQMICVWYKHRSLKYLKMRSCCAWTAWVSAGQTSTT 191
           +RP   QI   L  + + I +W+++R +K+ K +     T   S  +T+++
Sbjct: 105 SRPRRIQIAENLNLSERQIKIWFQNRRMKHKKEQMNKVSTPRSSPAETASS 155


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = +3

Query: 42  RPTWPQIT*PLCCTNQMICVWYKHRSLKY 128
           RP   +I   L  T + + VW+++R +K+
Sbjct: 31  RPRRIEIAASLDLTERQVKVWFQNRRMKH 59


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = +3

Query: 42  RPTWPQIT*PLCCTNQMICVWYKHRSLKY 128
           RP   +I   L  T + + VW+++R +K+
Sbjct: 162 RPRRIEIAASLDLTERQVKVWFQNRRMKH 190


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 10/40 (25%), Positives = 17/40 (42%)
 Frame = +2

Query: 23  LSVRFRASDMATDNLTALLYKPNDLRLVQTPIPEISEDEV 142
           + ++  ASD   D     +YK   L   + P P I  + +
Sbjct: 185 MGIKLNASDNDKDGYKRAVYKIGQLLTYRAPRPWIHNETI 224


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +2

Query: 74  LLYKPNDLRLVQTPIPEISEDEV 142
           L+  P D R+V   IP    D+V
Sbjct: 12  LILTPTDQRVVTRTIPSFLRDDV 34


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 7/23 (30%), Positives = 12/23 (52%)
 Frame = -1

Query: 655 KDIYYEYFVCSKGFSCEHGKEAD 587
           K  +  + +C K + C HGK  +
Sbjct: 479 KQDFMPHELCDKYYRCVHGKPTE 501


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 10/40 (25%), Positives = 17/40 (42%)
 Frame = +2

Query: 23  LSVRFRASDMATDNLTALLYKPNDLRLVQTPIPEISEDEV 142
           + ++  ASD   D     +YK   L   + P P I  + +
Sbjct: 185 MGIKLNASDNDKDGYKRAVYKIGQLLTYRAPRPWIYNETI 224


>AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like
           protein protein.
          Length = 242

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +3

Query: 156 TAWVSAGQTSTTG 194
           +AW SAG   TTG
Sbjct: 53  SAWTSAGLQPTTG 65


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -2

Query: 249 SCPMIIGSSSTKCP 208
           +C  +IGS S KCP
Sbjct: 198 TCLDLIGSYSCKCP 211


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,492
Number of Sequences: 336
Number of extensions: 3955
Number of successful extensions: 36
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18530690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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