Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt5a02
(703 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70782-3|CAA94841.1| 347|Caenorhabditis elegans Hypothetical pr... 304 3e-83
Z70782-4|CAA94842.1| 347|Caenorhabditis elegans Hypothetical pr... 285 2e-77
AF125951-1|AAD14690.3| 326|Caenorhabditis elegans Hypothetical ... 107 8e-24
Z81570-3|CAB04603.1| 351|Caenorhabditis elegans Hypothetical pr... 95 6e-20
Z81570-2|CAB04604.1| 349|Caenorhabditis elegans Hypothetical pr... 80 2e-15
AC006663-3|AAL32231.1| 386|Caenorhabditis elegans Hypothetical ... 64 9e-11
U18781-1|AAB03374.1| 384|Caenorhabditis elegans alcohol dehydro... 61 9e-10
AC006663-4|AAF39899.1| 384|Caenorhabditis elegans Hypothetical ... 61 9e-10
AC025722-1|AAK68507.1| 554|Caenorhabditis elegans Hypothetical ... 53 2e-07
Z73899-5|CAA98080.1| 372|Caenorhabditis elegans Hypothetical pr... 49 4e-06
Z92834-3|CAB07384.1| 328|Caenorhabditis elegans Hypothetical pr... 46 3e-05
AF067618-4|AAY44003.1| 381|Caenorhabditis elegans Hypothetical ... 35 0.049
U53341-1|AAC69110.3| 727|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z82081-5|CAB04958.1| 344|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z99171-2|CAB16314.1| 710|Caenorhabditis elegans Hypothetical pr... 29 4.3
AC024817-14|AAY86301.1| 354|Caenorhabditis elegans Hypothetical... 27 9.8
>Z70782-3|CAA94841.1| 347|Caenorhabditis elegans Hypothetical
protein R04B5.5 protein.
Length = 347
Score = 304 bits (747), Expect = 3e-83
Identities = 135/218 (61%), Positives = 175/218 (80%)
Frame = +2
Query: 50 MATDNLTALLYKPNDLRLVQTPIPEISEDEVLLRMDCVGICGSDVHYWQKGQCGHFVLEE 229
M+ DNL+A+LY +DLRL Q PIP+ ++VL+++ VGICGSDVHYW G G FV++E
Sbjct: 1 MSQDNLSAVLYGVDDLRLEQVPIPKPGPNQVLVKVHTVGICGSDVHYWTHGAIGPFVVKE 60
Query: 230 PMIMGHEASGVVAKIGSKVKNLTVGDRVAIEPGVPCRYCEFCKTGRYHLCPDMIFCATPP 409
PMI+GHE SG+V+++G++VK+L VGDR+A+EPG+PC+ CE CKTGRY+LCP+M F ATPP
Sbjct: 61 PMIVGHETSGIVSEVGNEVKHLKVGDRIAMEPGLPCKLCEHCKTGRYNLCPEMRFFATPP 120
Query: 410 VHGNLVRYYKHAADFCFKLPDHVTMEEGALLEPLAVGIHACKRGGVSAGHVVLVLGAGPI 589
VHG L R+ H ADFCFKLPD+++ E+GAL+EPL+V IHAC+RG V GH VLVLGAGPI
Sbjct: 121 VHGTLSRFVVHDADFCFKLPDNLSFEDGALIEPLSVAIHACRRGNVQMGHRVLVLGAGPI 180
Query: 590 GLLTMLTAKAFGAHKVLIIDILQSRLDFAKSLGADYTL 703
G+L ++TAKA GA KV+I D+ RL AK LGAD T+
Sbjct: 181 GVLNLITAKAVGAGKVVITDLDDGRLALAKKLGADATI 218
>Z70782-4|CAA94842.1| 347|Caenorhabditis elegans Hypothetical
protein R04B5.6 protein.
Length = 347
Score = 285 bits (700), Expect = 2e-77
Identities = 131/218 (60%), Positives = 169/218 (77%)
Frame = +2
Query: 50 MATDNLTALLYKPNDLRLVQTPIPEISEDEVLLRMDCVGICGSDVHYWQKGQCGHFVLEE 229
M+ DNL+A+LY NDLRL Q PI + +VL++++ VGICGSDVH+ G G FV++E
Sbjct: 1 MSQDNLSAVLYGINDLRLEQAPISKPGPRQVLVKINTVGICGSDVHFLTHGAIGSFVVKE 60
Query: 230 PMIMGHEASGVVAKIGSKVKNLTVGDRVAIEPGVPCRYCEFCKTGRYHLCPDMIFCATPP 409
PM++GHE+SGVV++IGS+VK VGDR+A+EPG+PC+ CE CK GRY+LCPDM F ATPP
Sbjct: 61 PMVLGHESSGVVSEIGSEVKGFKVGDRIAMEPGLPCKLCEHCKIGRYNLCPDMRFFATPP 120
Query: 410 VHGNLVRYYKHAADFCFKLPDHVTMEEGALLEPLAVGIHACKRGGVSAGHVVLVLGAGPI 589
V+G L R+ H ADFCFKLPD+++ E+GALLEPL+V I AC+RG V G +LVLGAGPI
Sbjct: 121 VNGALSRFVVHDADFCFKLPDNLSFEDGALLEPLSVAIQACRRGTVQMGQKILVLGAGPI 180
Query: 590 GLLTMLTAKAFGAHKVLIIDILQSRLDFAKSLGADYTL 703
G+L +LTAKA GA KV+I D+ RL A+ LGAD T+
Sbjct: 181 GVLNLLTAKAIGASKVVITDLNDERLALARLLGADATI 218
>AF125951-1|AAD14690.3| 326|Caenorhabditis elegans Hypothetical
protein D2063.1 protein.
Length = 326
Score = 107 bits (257), Expect = 8e-24
Identities = 71/190 (37%), Positives = 101/190 (53%), Gaps = 3/190 (1%)
Frame = +2
Query: 95 LRLVQTPIPEISEDEVLLRMDCVGICGSDVHYWQKGQCGHFVLEEPMIMGHEASGVVAKI 274
L + Q PIP+ +EDE+L++M+ GIC SDVH W G H+V + PMI GHE +G V +
Sbjct: 22 LEIKQLPIPQPNEDELLVKMEYSGICHSDVHTWL-GDF-HYVSKCPMIGGHEGAGSVISV 79
Query: 275 GSKVKNLTVGDRVAIE-PGVPCRYCEFCKTGRYHLCPDMIFCATPPVHGNLVRYYKHAAD 451
GSKVKN +GD+V I+ C CE+C+TG LCP ++ +G Y
Sbjct: 80 GSKVKNWQIGDKVGIKLVQGNCLNCEYCQTGHEPLCPH-VWNIGVQKYGTFQEYATIRDV 138
Query: 452 FCFKLPDHVTMEEGA-LLEPLAVGIHACKRGGVSAGHVVLVLGA-GPIGLLTMLTAKAFG 625
K+P + M A +L A K V +G +V V GA G +G + A+A G
Sbjct: 139 DAIKIPKSMNMAAAAPVLCGGVTAYKALKESEVKSGQIVAVTGAGGGLGSFAIQYARAMG 198
Query: 626 AHKVLIIDIL 655
+V+ DI+
Sbjct: 199 M-RVVAEDIV 207
>Z81570-3|CAB04603.1| 351|Caenorhabditis elegans Hypothetical
protein K12G11.4 protein.
Length = 351
Score = 94.7 bits (225), Expect = 6e-20
Identities = 68/206 (33%), Positives = 103/206 (50%), Gaps = 5/206 (2%)
Frame = +2
Query: 95 LRLVQTPIPEISEDEVLLRMDCVGICGSDVHYWQKGQCGHFVLEE--PMIMGHEASGVVA 268
L + Q +P+ E+E+L++++ GIC SD+H W+ G F P+I GHE +G V
Sbjct: 22 LEVRQVSVPQPQENELLVKIEYSGICHSDLHTWE----GDFEYASICPLIGGHEGAGTVV 77
Query: 269 KIGSKVKNLTVGDRVAIE-PGVPCRYCEFCKTGRYHLCPDMIFCATPPVHGNLVRYYKHA 445
IGSKVK +GDR I+ C CE+CKTG LC D I HG Y
Sbjct: 78 TIGSKVKGWNIGDRAGIKLINANCLNCEYCKTGHEPLC-DHIQNYGIDRHGTFQEYLTIR 136
Query: 446 ADFCFKLPDHVTMEEGA-LLEPLAVGIHACKRGGVSAGHVVLVLGA-GPIGLLTMLTAKA 619
K+ + + A +L + K V G +V++ GA G +G + AKA
Sbjct: 137 DIDAIKVSNDTNLAAAAPVLCGGVTAYKSLKATNVKPGQIVVLTGAGGGLGSFGIQYAKA 196
Query: 620 FGAHKVLIIDILQSRLDFAKSLGADY 697
G +V+ +D + S+ D ++LGA++
Sbjct: 197 MGM-RVVAVDHI-SKEDHCRNLGAEW 220
>Z81570-2|CAB04604.1| 349|Caenorhabditis elegans Hypothetical
protein K12G11.3 protein.
Length = 349
Score = 79.8 bits (188), Expect = 2e-15
Identities = 59/204 (28%), Positives = 96/204 (47%), Gaps = 3/204 (1%)
Frame = +2
Query: 95 LRLVQTPIPEISEDEVLLRMDCVGICGSDVHYWQKGQCGHFVLEEPMIMGHEASGVVAKI 274
L + Q P+P ++DE+L++++ GIC SD+H W V P++ GHE +G V +I
Sbjct: 21 LEVRQVPVPSPADDEILVKIEYSGICHSDLHVWLGDLKDMSVC--PLVGGHEGAGSVVQI 78
Query: 275 GSKVKNLTVGDRVAIE-PGVPCRYCEFCKTGRYHLCPDMIFCATPPVHGNLVRYYKHAAD 451
G V +GD+ ++ C CEFCK G LC + G Y
Sbjct: 79 GKNVTGWQLGDKAGVKLMNFNCLNCEFCKKGHEPLCHHIQNYGFDR-SGTFQEYLTIRGV 137
Query: 452 FCFKLPDHVTMEEGALLEPLAVGIH-ACKRGGVSAGHVVLVLGA-GPIGLLTMLTAKAFG 625
K+ + A + V ++ A K V+ G ++++ GA G +G L + A A G
Sbjct: 138 DAAKINKDTNLAAAAPILCAGVTVYKALKESNVAPGQIIVLTGAGGGLGSLAIQYACAMG 197
Query: 626 AHKVLIIDILQSRLDFAKSLGADY 697
+V+ +D S+ K LGA++
Sbjct: 198 M-RVVAMD-HGSKEAHCKGLGAEW 219
>AC006663-3|AAL32231.1| 386|Caenorhabditis elegans Hypothetical
protein H24K24.3b protein.
Length = 386
Score = 64.1 bits (149), Expect = 9e-11
Identities = 59/227 (25%), Positives = 96/227 (42%), Gaps = 25/227 (11%)
Frame = +2
Query: 86 PNDLRLVQTPIPEISEDEVLLRMDCVGICGSDVHYWQKGQCGHFVLEEPMIMGHEASGVV 265
P + +Q P+ E V ++ +C +D Y G + P+++GHE SG+V
Sbjct: 22 PLSIETIQVAPPKAHEVRVKFQILYTAVCHTDA-YTLDGHDPEGLF--PVVLGHEGSGIV 78
Query: 266 AKIGSKVKNLTVGDRVAIEPGVPCRYCEFCKTGRYHLCPDMIFCA----TPPVHGNLVRY 433
+G V GD V C+ CE+CK + +LC + P
Sbjct: 79 ESVGEGVTGFAPGDHVVPLYVPQCKECEYCKNPKTNLCQKIRISQGNGFMPDGSSRFTCN 138
Query: 434 YKHAADF--CFKLPDHVTMEEGALLE-----PL-AVGIHACKRGGVSAGH---------- 559
K F C ++ + + +L + PL V + C G+S G+
Sbjct: 139 GKQLFHFMGCSTFSEYTVVADISLCKVNPEAPLEKVSLLGC---GISTGYGAVLNTCKVE 195
Query: 560 ---VVLVLGAGPIGLLTMLTAKAFGAHKVLIIDILQSRLDFAKSLGA 691
V V G G +GL ++ AKA GA K++ ID+++S+ + AK GA
Sbjct: 196 EGSTVAVWGLGAVGLAVIMGAKAAGAKKIVGIDLIESKFESAKFFGA 242
>U18781-1|AAB03374.1| 384|Caenorhabditis elegans alcohol
dehydrogenase protein.
Length = 384
Score = 60.9 bits (141), Expect = 9e-10
Identities = 59/227 (25%), Positives = 97/227 (42%), Gaps = 25/227 (11%)
Frame = +2
Query: 86 PNDLRLVQTPIPEISEDEVLLRMDCVGICGSDVHYWQKGQCGHFVLEEPMIMGHEASGVV 265
P + +Q P+ E V +++ +C +D Y G + P+++GHE SG+V
Sbjct: 22 PLSIETIQVAPPKAHE--VRVKILYTAVCHTDA-YTLDGHDPEGLF--PVVLGHEGSGIV 76
Query: 266 AKIGSKVKNLTVGDRVAIEPGVPCRYCEFCKTGRYHLCPDMIFCA----TPPVHGNLVRY 433
+G V GD V C+ CE+CK + +LC + P
Sbjct: 77 ESVGEGVTGFAPGDHVVPLYVPQCKECEYCKNPKTNLCQKIRISQGNGFMPDGSSRFTCN 136
Query: 434 YKHAADF--CFKLPDHVTMEEGALLE-----PL-AVGIHACKRGGVSAGH---------- 559
K F C ++ + + +L + PL V + C G+S G+
Sbjct: 137 GKQLFHFMGCSTFSEYTVVADISLCKVNPEAPLEKVSLLGC---GISTGYGAVLNTCKVE 193
Query: 560 ---VVLVLGAGPIGLLTMLTAKAFGAHKVLIIDILQSRLDFAKSLGA 691
V V G G +GL ++ AKA GA K++ ID+++S+ + AK GA
Sbjct: 194 EGSTVAVWGLGAVGLAVIMGAKAAGAKKIVGIDLIESKFESAKFFGA 240
>AC006663-4|AAF39899.1| 384|Caenorhabditis elegans Hypothetical
protein H24K24.3a protein.
Length = 384
Score = 60.9 bits (141), Expect = 9e-10
Identities = 59/227 (25%), Positives = 97/227 (42%), Gaps = 25/227 (11%)
Frame = +2
Query: 86 PNDLRLVQTPIPEISEDEVLLRMDCVGICGSDVHYWQKGQCGHFVLEEPMIMGHEASGVV 265
P + +Q P+ E V +++ +C +D Y G + P+++GHE SG+V
Sbjct: 22 PLSIETIQVAPPKAHE--VRVKILYTAVCHTDA-YTLDGHDPEGLF--PVVLGHEGSGIV 76
Query: 266 AKIGSKVKNLTVGDRVAIEPGVPCRYCEFCKTGRYHLCPDMIFCA----TPPVHGNLVRY 433
+G V GD V C+ CE+CK + +LC + P
Sbjct: 77 ESVGEGVTGFAPGDHVVPLYVPQCKECEYCKNPKTNLCQKIRISQGNGFMPDGSSRFTCN 136
Query: 434 YKHAADF--CFKLPDHVTMEEGALLE-----PL-AVGIHACKRGGVSAGH---------- 559
K F C ++ + + +L + PL V + C G+S G+
Sbjct: 137 GKQLFHFMGCSTFSEYTVVADISLCKVNPEAPLEKVSLLGC---GISTGYGAVLNTCKVE 193
Query: 560 ---VVLVLGAGPIGLLTMLTAKAFGAHKVLIIDILQSRLDFAKSLGA 691
V V G G +GL ++ AKA GA K++ ID+++S+ + AK GA
Sbjct: 194 EGSTVAVWGLGAVGLAVIMGAKAAGAKKIVGIDLIESKFESAKFFGA 240
>AC025722-1|AAK68507.1| 554|Caenorhabditis elegans Hypothetical
protein Y50D4C.2 protein.
Length = 554
Score = 53.2 bits (122), Expect = 2e-07
Identities = 51/179 (28%), Positives = 78/179 (43%), Gaps = 25/179 (13%)
Frame = +2
Query: 230 PMIMGHEASGVVAKIGSKVKNLTVGDRVA---IEPGVPCRYCEFCKTGRYH--------- 373
P+++GHE SG+V +G V GD V + C YC+ KT
Sbjct: 238 PVVLGHEGSGIVESVGKGVTGFAPGDHVVPLYVPQCKECEYCKNPKTNMCQKIRVSQGDG 297
Query: 374 LCPD---MIFCATPPVHG----NLVRYYKHAADFCF-KLPDHVTMEEGALLE-PLAVG-- 520
PD C + + Y AD K+ +E+ +LL ++ G
Sbjct: 298 FMPDGTSRFTCNGKQLFHFMGCSTFSEYTVVADISLCKVNPQAPLEKVSLLGCGISTGYG 357
Query: 521 --IHACKRGGVSAGHVVLVLGAGPIGLLTMLTAKAFGAHKVLIIDILQSRLDFAKSLGA 691
++ CK V G V V G G +GL ++ AKA GA K++ ID+++S+ + AK GA
Sbjct: 358 AVLNTCK---VEEGSTVAVWGLGAVGLAVIMGAKAAGAKKIVGIDLIESKFEKAKMFGA 413
>Z73899-5|CAA98080.1| 372|Caenorhabditis elegans Hypothetical
protein ZK829.7 protein.
Length = 372
Score = 48.8 bits (111), Expect = 4e-06
Identities = 61/237 (25%), Positives = 105/237 (44%), Gaps = 19/237 (8%)
Frame = +2
Query: 50 MATDNLTALLYKPNDLRLV----QTPIPEISEDEVLLRMDCVGICGSD--VHYWQKGQCG 211
M N L P DLR V + PIP++ +++ G+C +D V ++ +
Sbjct: 1 MPATNRRISLGSPKDLREVKFFDEEPIPDVPPKGARVKVCYAGVCLTDREVSNTKQARIT 60
Query: 212 HFVLEEPMIMGHEASGVVAKIGSKVK----NLTVGDRVAIEPGVPCRYCEFCKTGR--YH 373
+ + + + G+E SG+V G++ +LT+GD+V + P E C G Y
Sbjct: 61 NGIKDTSLFPGYEVSGIVESFGAECTPGDYDLTIGDKVIVWPTD-----EMCSHGYADYV 115
Query: 374 LCPDMIFCATPPVHGNLVRYYKHAADFCFKLPDHVTMEEGALLEPLAVGIHACKRGGVSA 553
P + F P ++ H A LP T A+L+ + + A + S
Sbjct: 116 AVPTLHFLVKIPETLSM-----HVASI---LPAGATWALSAVLQARPI-VEAFSQ---SK 163
Query: 554 GHV-VLVLGAGPIGLLTMLTAKAFGA------HKVLIIDILQSRLDFAKSLGADYTL 703
G +L++GAG +GL + AK F A ++++ D + RL A+ GAD+ +
Sbjct: 164 GFCNILIVGAGGLGLWLLKLAKHFLAINNDKKIRLMVADAKEERLSLAERNGADFVV 220
>Z92834-3|CAB07384.1| 328|Caenorhabditis elegans Hypothetical
protein F39B2.3 protein.
Length = 328
Score = 46.0 bits (104), Expect = 3e-05
Identities = 25/76 (32%), Positives = 42/76 (55%)
Frame = +2
Query: 86 PNDLRLVQTPIPEISEDEVLLRMDCVGICGSDVHYWQKGQCGHFVLEEPMIMGHEASGVV 265
P+ + V++ +P + +++VL+R G+ D Y + GQ G P + G + +G V
Sbjct: 21 PDVIEAVESDMPRLEKNQVLVRNYAAGVNPVDT-YIRAGQYGKLP-NLPYVPGKDGAGFV 78
Query: 266 AKIGSKVKNLTVGDRV 313
+G VKN+ VGDRV
Sbjct: 79 ELVGESVKNVKVGDRV 94
Score = 30.3 bits (65), Expect = 1.4
Identities = 29/81 (35%), Positives = 35/81 (43%), Gaps = 3/81 (3%)
Frame = +2
Query: 458 FKLPDHVTMEEGALL-EPLAVGIHAC-KRGGVSAGHVVLVLGA-GPIGLLTMLTAKAFGA 628
F+LP+ V+ EEGA L P A G G V+LV GA G +G M A
Sbjct: 113 FELPEGVSFEEGASLGVPYLTAYRALFHLAGAKTGDVILVHGASGGVGSALMQLAAWRNI 172
Query: 629 HKVLIIDILQSRLDFAKSLGA 691
V + F KSLGA
Sbjct: 173 EAVGTAGSADG-IRFVKSLGA 192
>AF067618-4|AAY44003.1| 381|Caenorhabditis elegans Hypothetical
protein F56H1.6 protein.
Length = 381
Score = 35.1 bits (77), Expect = 0.049
Identities = 53/208 (25%), Positives = 86/208 (41%), Gaps = 15/208 (7%)
Frame = +2
Query: 95 LRLVQTPIPEISED-EVLLRMDCVGICGSDVHY-----------WQKGQ-CGHFVLEEPM 235
+ L + P+P I++ +VLL++ + DV W+K + C P+
Sbjct: 29 VELKEVPLPVINKPGQVLLKVKAASVNPIDVDMSQGYGREFLGTWKKIESCDAAASRFPL 88
Query: 236 IMGHEASGVVAKIGSKVKNLTVGDRV-AIEPGV-PCRYCEFCKTGRYHLCPDMIFCATPP 409
I G + + VV +G V NL GD V A+ P + P + EF T D +C+ P
Sbjct: 89 IPGRDCTAVVESVGGDVHNLAPGDEVMAVVPVILPGTHAEFVVT-------DSKYCSKKP 141
Query: 410 VHGNLVRYYKHAADFCFKLPDHVTMEEGALLEPLAVGIHACKRGGVSAGHVVLVLGAGPI 589
NL + AA LP + A I + V++ GAG +
Sbjct: 142 --SNL-SFVSAAA-----LPYVASTAYSAFT------IARVSQRNAKQQRVLIHGGAGGV 187
Query: 590 GLLTMLTAKAFGAHKVLIIDILQSRLDF 673
G + + KA+G K+ + + RLD+
Sbjct: 188 GSMAIQLLKAWGCEKI-VATCAKGRLDY 214
>U53341-1|AAC69110.3| 727|Caenorhabditis elegans Hypothetical
protein F49E10.5 protein.
Length = 727
Score = 29.9 bits (64), Expect = 1.8
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = +2
Query: 554 GHVVLVLGAGPIGLLTMLTAKAFGAHKVLIIDILQSRLDFAKSLGADYTL 703
G V+ +LG G +G L A+AFG H + ++ D A YT+
Sbjct: 325 GSVLGILGCGRVGTAVGLRARAFGLHIIFYDPFVREGHDKALGFERVYTM 374
>Z82081-5|CAB04958.1| 344|Caenorhabditis elegans Hypothetical
protein W09H1.5 protein.
Length = 344
Score = 29.1 bits (62), Expect = 3.2
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +2
Query: 230 PMIMGHEASGVVAKIGSKVKNLTVGDRV 313
P + G+E G V +GS V ++ VGD V
Sbjct: 76 PAVGGNEGFGKVISVGSNVSSIKVGDHV 103
>Z99171-2|CAB16314.1| 710|Caenorhabditis elegans Hypothetical
protein F47G4.2 protein.
Length = 710
Score = 28.7 bits (61), Expect = 4.3
Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 5/67 (7%)
Frame = -1
Query: 322 LYGHSITNCQI-----LDFRTDLGHYS*SFVSHDHWFFQHEVSALTLLPVVDV*PADTHA 158
LY I+NC + + +L H S + ++ W+ E+ AL LL V+D+ TH
Sbjct: 164 LYSLDISNCGVTILTGISRLKNLRHLSLRSLIYESWYDIRELFALKLLNVLDLSMHSTH- 222
Query: 157 VHAQQDL 137
HA++++
Sbjct: 223 -HARRNM 228
>AC024817-14|AAY86301.1| 354|Caenorhabditis elegans Hypothetical
protein Y54G2A.45 protein.
Length = 354
Score = 27.5 bits (58), Expect = 9.8
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = +2
Query: 344 CEFCKTGRYHLCPDMIFCATP 406
CE C YH C D C TP
Sbjct: 21 CETCLGSGYHYCADSKLCNTP 41
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,043,538
Number of Sequences: 27780
Number of extensions: 370376
Number of successful extensions: 1280
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1179
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1274
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1624019012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -