Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt5a01
         (667 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0NG44 Cluster: ENSANGP00000030660; n=3; Culicidae|Rep:...   136   6e-31
UniRef50_Q4TFL0 Cluster: Chromosome undetermined SCAF4399, whole...    38   0.16 
UniRef50_A0LTZ5 Cluster: Cytochrome oxidase assembly; n=1; Acido...    34   2.7  
UniRef50_Q389L7 Cluster: Procyclic form surface glycoprotein; n=...    34   2.7  
UniRef50_A5K0H2 Cluster: Putative uncharacterized protein; n=1; ...    33   4.7  
UniRef50_Q5QML3 Cluster: Putative uncharacterized protein P0454H...    33   6.2  
UniRef50_UPI000023CDE1 Cluster: hypothetical protein FG09995.1; ...    33   8.2  
UniRef50_A5NT10 Cluster: Putative uncharacterized protein precur...    33   8.2  
UniRef50_Q6CCR5 Cluster: Yarrowia lipolytica chromosome C of str...    33   8.2  

>UniRef50_A0NG44 Cluster: ENSANGP00000030660; n=3; Culicidae|Rep:
           ENSANGP00000030660 - Anopheles gambiae str. PEST
          Length = 213

 Score =  136 bits (328), Expect = 6e-31
 Identities = 61/93 (65%), Positives = 74/93 (79%)
 Frame = +1

Query: 376 MSLDEGRQSQRPYRYGMVLLCAGALINWLGLAEDYAEPVRYVGVACIVAGALLICAAMCC 555
           MSL+E R++QRPYRYGM+LLC GAL+NWLGLAE+Y+EPVRY GVACI+AGA LIC AMCC
Sbjct: 8   MSLEETRRTQRPYRYGMMLLCVGALVNWLGLAENYSEPVRYAGVACILAGACLICTAMCC 67

Query: 556 WLQSPARQPQNERASTDTHQIDDPIHVISMPDE 654
           WL +P       R+ T+  + DDP+HVIS  DE
Sbjct: 68  WLHTPG------RSGTNGDEGDDPVHVISANDE 94


>UniRef50_Q4TFL0 Cluster: Chromosome undetermined SCAF4399, whole
           genome shotgun sequence; n=1; Tetraodon
           nigroviridis|Rep: Chromosome undetermined SCAF4399,
           whole genome shotgun sequence - Tetraodon nigroviridis
           (Green puffer)
          Length = 118

 Score = 38.3 bits (85), Expect = 0.16
 Identities = 16/62 (25%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
 Frame = +1

Query: 418 YGMVLLCAGALINWLGLA-EDYAEPVRYVGVACIVAGALLICAAMCCWLQSPARQPQNER 594
           +G+V+L AG ++  +      +   + Y+G+  + AG LL+ +++ CW     R+ +  R
Sbjct: 44  FGVVVLIAGIVVTAVAYTFNSHGSTISYLGLVLLAAGLLLLASSLLCWKSRLDRKKERRR 103

Query: 595 AS 600
            S
Sbjct: 104 ES 105


>UniRef50_A0LTZ5 Cluster: Cytochrome oxidase assembly; n=1;
           Acidothermus cellulolyticus 11B|Rep: Cytochrome oxidase
           assembly - Acidothermus cellulolyticus (strain ATCC
           43068 / 11B)
          Length = 370

 Score = 34.3 bits (75), Expect = 2.7
 Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 4/60 (6%)
 Frame = +1

Query: 382 LDEGRQSQRPYRYGMVLLCAGALINW----LGLAEDYAEPVRYVGVACIVAGALLICAAM 549
           +D GR++ R  R+ +VLL   A+I W    LGL     E +  +G A +V GA  + A++
Sbjct: 238 MDVGRRTIRATRWMVVLLAVQAVIGWTQYFLGLPAGLVE-IHMLGAASLVVGATCVSASL 296


>UniRef50_Q389L7 Cluster: Procyclic form surface glycoprotein; n=2;
           Trypanosoma brucei|Rep: Procyclic form surface
           glycoprotein - Trypanosoma brucei
          Length = 425

 Score = 34.3 bits (75), Expect = 2.7
 Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 6/55 (10%)
 Frame = +1

Query: 475 DYAEPVRYVGVACIVAGALL------ICAAMCCWLQSPARQPQNERASTDTHQID 621
           ++  P R +G+ACIVAG+LL      +C  + C+         N+ +  DT Q D
Sbjct: 255 EFGVPNRTMGIACIVAGSLLLLLEIAVCVCVVCFCLKRKGSSSNDTSDPDTPQGD 309


>UniRef50_A5K0H2 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium vivax|Rep: Putative uncharacterized protein -
           Plasmodium vivax
          Length = 1425

 Score = 33.5 bits (73), Expect = 4.7
 Identities = 18/43 (41%), Positives = 22/43 (51%)
 Frame = +3

Query: 438 CGSANQLAGSG*RLRGTGAICGRGVHRRRSTTHLRGDVLLAAI 566
           C +       G   RGTG+  GRG H RR + H R D+LL  I
Sbjct: 88  CATEKNNPNDGEDKRGTGSSTGRGTHHRRGSHHKR-DLLLINI 129


>UniRef50_Q5QML3 Cluster: Putative uncharacterized protein
           P0454H12.9; n=1; Oryza sativa (japonica
           cultivar-group)|Rep: Putative uncharacterized protein
           P0454H12.9 - Oryza sativa subsp. japonica (Rice)
          Length = 135

 Score = 33.1 bits (72), Expect = 6.2
 Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
 Frame = -3

Query: 536 MSSAPATMHATPTYRTGSA*SSARP-SQLISAPAHNNTMP 420
           +   PA  H TP  R GSA +SAR  +Q  SAPA  ++ P
Sbjct: 6   VGQVPAISHPTPVRRLGSAPASARAGAQRTSAPASESSSP 45


>UniRef50_UPI000023CDE1 Cluster: hypothetical protein FG09995.1;
           n=1; Gibberella zeae PH-1|Rep: hypothetical protein
           FG09995.1 - Gibberella zeae PH-1
          Length = 821

 Score = 32.7 bits (71), Expect = 8.2
 Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
 Frame = -1

Query: 508 PRPHIAPVPRSL-QPDPAS*LALPHITTPCHTCM 410
           P PH  P+P++L +P PAS  ALP I   C+ C+
Sbjct: 310 PMPHHVPLPKALYEPLPAS-FALPGIMRTCNCCV 342


>UniRef50_A5NT10 Cluster: Putative uncharacterized protein
           precursor; n=4; Alphaproteobacteria|Rep: Putative
           uncharacterized protein precursor - Methylobacterium sp.
           4-46
          Length = 148

 Score = 32.7 bits (71), Expect = 8.2
 Identities = 11/27 (40%), Positives = 19/27 (70%)
 Frame = +1

Query: 457 WLGLAEDYAEPVRYVGVACIVAGALLI 537
           W+GLA+   +P R +G+A ++ G +LI
Sbjct: 120 WMGLAQRAIDPPRLIGIALLIGGVILI 146


>UniRef50_Q6CCR5 Cluster: Yarrowia lipolytica chromosome C of strain
           CLIB122 of Yarrowia lipolytica; n=1; Yarrowia
           lipolytica|Rep: Yarrowia lipolytica chromosome C of
           strain CLIB122 of Yarrowia lipolytica - Yarrowia
           lipolytica (Candida lipolytica)
          Length = 540

 Score = 32.7 bits (71), Expect = 8.2
 Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
 Frame = +1

Query: 379 SLDEGRQSQRPYRYGMVLLCAGALINWLGLA--EDYAEPVRYVGVACIVAGALLIC 540
           S+D G  S++  RY + +LCAGA I  +G A   DY      +    ++ G LL C
Sbjct: 357 SIDHG-MSEQVIRYTVTVLCAGATIGRVGPAVMADYLGKFNILVFVSMINGILLFC 411


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 631,672,782
Number of Sequences: 1657284
Number of extensions: 12819711
Number of successful extensions: 35396
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 33902
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35371
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 50826451017
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)