Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt4p20
         (391 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M64716-1|AAA16105.1|  125|Homo sapiens ribosomal protein protein.     115   5e-26
BC004986-1|AAH04986.1|  125|Homo sapiens ribosomal protein S25 p...   115   5e-26
BC004294-1|AAH04294.1|  125|Homo sapiens ribosomal protein S25 p...   115   5e-26
BC003537-1|AAH03537.1|  125|Homo sapiens ribosomal protein S25 p...   115   5e-26
AB061844-1|BAB79482.1|  125|Homo sapiens ribosomal protein S25 p...   115   5e-26
AK097034-1|BAC04932.1|  120|Homo sapiens protein ( Homo sapiens ...    29   5.3  

>M64716-1|AAA16105.1|  125|Homo sapiens ribosomal protein protein.
          Length = 125

 Score =  115 bits (277), Expect = 5e-26
 Identities = 60/81 (74%), Positives = 62/81 (76%)
 Frame = +2

Query: 131 VRDKLNNQVLFDKPTYXKLYKEVPQYXLITPAVVSERLKVRGSLARRALIELREKGLIXQ 310
           VRDKLNN VLFDK TY KL KEVP Y LITPAVVSERLK+RGSLAR AL EL  KGLI  
Sbjct: 40  VRDKLNNLVLFDKATYDKLCKEVPNYKLITPAVVSERLKIRGSLARAALQELLSKGLIKL 99

Query: 311 VVQHHGQVIYTRATKGDDPVA 373
           V +H  QVIYTR TKG D  A
Sbjct: 100 VSKHRAQVIYTRNTKGGDAPA 120


>BC004986-1|AAH04986.1|  125|Homo sapiens ribosomal protein S25
           protein.
          Length = 125

 Score =  115 bits (277), Expect = 5e-26
 Identities = 60/81 (74%), Positives = 62/81 (76%)
 Frame = +2

Query: 131 VRDKLNNQVLFDKPTYXKLYKEVPQYXLITPAVVSERLKVRGSLARRALIELREKGLIXQ 310
           VRDKLNN VLFDK TY KL KEVP Y LITPAVVSERLK+RGSLAR AL EL  KGLI  
Sbjct: 40  VRDKLNNLVLFDKATYDKLCKEVPNYKLITPAVVSERLKIRGSLARAALQELLSKGLIKL 99

Query: 311 VVQHHGQVIYTRATKGDDPVA 373
           V +H  QVIYTR TKG D  A
Sbjct: 100 VSKHRAQVIYTRNTKGGDAPA 120


>BC004294-1|AAH04294.1|  125|Homo sapiens ribosomal protein S25
           protein.
          Length = 125

 Score =  115 bits (277), Expect = 5e-26
 Identities = 60/81 (74%), Positives = 62/81 (76%)
 Frame = +2

Query: 131 VRDKLNNQVLFDKPTYXKLYKEVPQYXLITPAVVSERLKVRGSLARRALIELREKGLIXQ 310
           VRDKLNN VLFDK TY KL KEVP Y LITPAVVSERLK+RGSLAR AL EL  KGLI  
Sbjct: 40  VRDKLNNLVLFDKATYDKLCKEVPNYKLITPAVVSERLKIRGSLARAALQELLSKGLIKL 99

Query: 311 VVQHHGQVIYTRATKGDDPVA 373
           V +H  QVIYTR TKG D  A
Sbjct: 100 VSKHRAQVIYTRNTKGGDAPA 120


>BC003537-1|AAH03537.1|  125|Homo sapiens ribosomal protein S25
           protein.
          Length = 125

 Score =  115 bits (277), Expect = 5e-26
 Identities = 60/81 (74%), Positives = 62/81 (76%)
 Frame = +2

Query: 131 VRDKLNNQVLFDKPTYXKLYKEVPQYXLITPAVVSERLKVRGSLARRALIELREKGLIXQ 310
           VRDKLNN VLFDK TY KL KEVP Y LITPAVVSERLK+RGSLAR AL EL  KGLI  
Sbjct: 40  VRDKLNNLVLFDKATYDKLCKEVPNYKLITPAVVSERLKIRGSLARAALQELLSKGLIKL 99

Query: 311 VVQHHGQVIYTRATKGDDPVA 373
           V +H  QVIYTR TKG D  A
Sbjct: 100 VSKHRAQVIYTRNTKGGDAPA 120


>AB061844-1|BAB79482.1|  125|Homo sapiens ribosomal protein S25
           protein.
          Length = 125

 Score =  115 bits (277), Expect = 5e-26
 Identities = 60/81 (74%), Positives = 62/81 (76%)
 Frame = +2

Query: 131 VRDKLNNQVLFDKPTYXKLYKEVPQYXLITPAVVSERLKVRGSLARRALIELREKGLIXQ 310
           VRDKLNN VLFDK TY KL KEVP Y LITPAVVSERLK+RGSLAR AL EL  KGLI  
Sbjct: 40  VRDKLNNLVLFDKATYDKLCKEVPNYKLITPAVVSERLKIRGSLARAALQELLSKGLIKL 99

Query: 311 VVQHHGQVIYTRATKGDDPVA 373
           V +H  QVIYTR TKG D  A
Sbjct: 100 VSKHRAQVIYTRNTKGGDAPA 120


>AK097034-1|BAC04932.1|  120|Homo sapiens protein ( Homo sapiens
           cDNA FLJ39715 fis, clone SMINT2013228. ).
          Length = 120

 Score = 29.1 bits (62), Expect = 5.3
 Identities = 13/42 (30%), Positives = 20/42 (47%), Gaps = 3/42 (7%)
 Frame = -3

Query: 212 AXTVGLPCTVXHMWVYQTTPGCSTCH---ELFLWTTSXXXLC 96
           A  +GL  T  H W Y+  P CS C+    ++++ T     C
Sbjct: 17  ANMLGLLHTHTHTWYYRCEPTCSACYTHTNIYIFKTEFHSYC 58


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 49,726,159
Number of Sequences: 237096
Number of extensions: 907100
Number of successful extensions: 1318
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1263
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1318
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2698607930
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)