Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt4p10
(683 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z47069-3|CAE17781.1| 141|Caenorhabditis elegans Hypothetical pr... 71 8e-13
U67956-1|AAB07690.2| 157|Caenorhabditis elegans Hypothetical pr... 51 7e-07
AL110500-18|CAB54478.1| 118|Caenorhabditis elegans Hypothetical... 47 1e-05
AL032626-6|CAA21526.1| 132|Caenorhabditis elegans Hypothetical ... 46 3e-05
AL110500-20|CAI79282.1| 110|Caenorhabditis elegans Hypothetical... 46 3e-05
AL032627-14|CAA21549.1| 386|Caenorhabditis elegans Hypothetical... 43 2e-04
AC084153-15|AAK84589.2| 152|Caenorhabditis elegans Hypothetical... 43 2e-04
U23486-8|AAC46779.3| 1025|Caenorhabditis elegans Nmda class glut... 39 0.004
AF318613-1|AAK01101.2| 1025|Caenorhabditis elegans NMDA-type ion... 39 0.004
AF068714-8|AAC17809.2| 86|Caenorhabditis elegans Hypothetical ... 38 0.005
AL033510-7|CAA22069.1| 124|Caenorhabditis elegans Hypothetical ... 35 0.062
AF068714-9|AAC17810.1| 87|Caenorhabditis elegans Hypothetical ... 33 0.14
Z69717-1|CAA93531.1| 1391|Caenorhabditis elegans Hypothetical pr... 33 0.19
AL032626-23|CAE17974.1| 88|Caenorhabditis elegans Hypothetical... 33 0.19
AL032626-7|CAA21544.1| 79|Caenorhabditis elegans Hypothetical ... 32 0.44
AF039044-8|AAG24129.1| 717|Caenorhabditis elegans Nuclear hormo... 30 1.3
U46675-1|AAB52645.2| 524|Caenorhabditis elegans Hypothetical pr... 30 1.8
AF078785-11|AAC27097.2| 294|Caenorhabditis elegans Hypothetical... 30 1.8
AF002198-10|AAF99937.1| 471|Caenorhabditis elegans Hypothetical... 30 1.8
Z19156-1|CAA79563.1| 160|Caenorhabditis elegans Hypothetical pr... 29 2.3
U29377-3|AAA68720.2| 472|Caenorhabditis elegans Hypothetical pr... 29 3.1
AL031629-6|CAA20980.2| 948|Caenorhabditis elegans Hypothetical ... 29 3.1
U64857-2|AAC25867.1| 1558|Caenorhabditis elegans Hypothetical pr... 28 5.4
U64857-1|AAC25868.1| 2167|Caenorhabditis elegans Hypothetical pr... 28 5.4
U41559-10|AAC24264.2| 371|Caenorhabditis elegans Hypothetical p... 28 5.4
AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical... 28 5.4
AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like pro... 28 5.4
AJ871144-1|CAI38753.2| 476|Caenorhabditis elegans UDP-galactopy... 27 9.4
AF125442-8|AAD12787.2| 476|Caenorhabditis elegans Hypothetical ... 27 9.4
AC024830-9|ABQ13052.1| 1594|Caenorhabditis elegans Hypothetical ... 27 9.4
>Z47069-3|CAE17781.1| 141|Caenorhabditis elegans Hypothetical
protein F36G3.3 protein.
Length = 141
Score = 70.9 bits (166), Expect = 8e-13
Identities = 30/70 (42%), Positives = 39/70 (55%)
Frame = +2
Query: 236 QMGPDPSHYTCPSCNTAIVTRVERVSTTKTHLFAALLCLIGCWPCVCIPYCTNSCQNAEH 415
++ P + CP C IVTR + V T +F A L L GCW C +P+C SC++ H
Sbjct: 67 RLEPHATKLQCPYCRMDIVTRTKSVYGLLTWIFFAALFLFGCWCCCFLPFCLRSCKDIIH 126
Query: 416 YCPNCSAYIG 445
CPNC A IG
Sbjct: 127 TCPNCRAMIG 136
>U67956-1|AAB07690.2| 157|Caenorhabditis elegans Hypothetical
protein F16F9.1 protein.
Length = 157
Score = 51.2 bits (117), Expect = 7e-07
Identities = 23/61 (37%), Positives = 36/61 (59%)
Frame = +2
Query: 263 TCPSCNTAIVTRVERVSTTKTHLFAALLCLIGCWPCVCIPYCTNSCQNAEHYCPNCSAYI 442
TC SC + T + V + T + +L LI +P +P+C +SC++A HYCP C+A +
Sbjct: 92 TCYSCGKYVHTLPKFVIGSLTWI-VFILVLICFFPLAFVPFCLDSCKDAHHYCPRCNALL 150
Query: 443 G 445
G
Sbjct: 151 G 151
>AL110500-18|CAB54478.1| 118|Caenorhabditis elegans Hypothetical
protein Y87G2A.18 protein.
Length = 118
Score = 47.2 bits (107), Expect = 1e-05
Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 6/74 (8%)
Frame = +2
Query: 251 PSHYTCPSCNTAIVTRVERVSTTKTHLFAALLCLIGC------WPCVCIPYCTNSCQNAE 412
P CP C IV+ +ERV+ + A+L +G W C+P+ + +
Sbjct: 43 PIEMDCPHCQNHIVSHIERVAGVLPWIIFAILAFLGIFLFIIPWCFCCVPFFLDQLLDVN 102
Query: 413 HYCPNCSAYIGNYS 454
H CP C ++G ++
Sbjct: 103 HSCPACKKFLGRFN 116
>AL032626-6|CAA21526.1| 132|Caenorhabditis elegans Hypothetical
protein Y37D8A.6 protein.
Length = 132
Score = 46.0 bits (104), Expect = 3e-05
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 4/73 (5%)
Frame = +2
Query: 236 QMGPDPSHYT--CPSCNTAIVTRVERVS--TTKTHLFAALLCLIGCWPCVCIPYCTNSCQ 403
+M P YT CP CNT + TRVER + T LF L +P +C +C + +
Sbjct: 59 KMAPSFEPYTEFCPRCNTNVCTRVERTMGFCSWTMLFLGLFVF---FPLLCC-FCLDGFK 114
Query: 404 NAEHYCPNCSAYI 442
++ H CPNC +
Sbjct: 115 DSRHSCPNCGTIL 127
>AL110500-20|CAI79282.1| 110|Caenorhabditis elegans Hypothetical
protein Y87G2A.19 protein.
Length = 110
Score = 45.6 bits (103), Expect = 3e-05
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 4/71 (5%)
Frame = +2
Query: 251 PSHYTCPSCNTAIVTRVERVSTTKTHLFAALLCLIG--CWPC--VCIPYCTNSCQNAEHY 418
P CP C T + V+ T++ ++ + G P + +P+C + ++AEHY
Sbjct: 33 PQLLDCPRCKVHGETELRFVNGFFTYVSFFIILIFGFAILPLFFLWVPFCVETFKDAEHY 92
Query: 419 CPNCSAYIGNY 451
CP+C A+IG Y
Sbjct: 93 CPSCRAWIGTY 103
>AL032627-14|CAA21549.1| 386|Caenorhabditis elegans Hypothetical
protein Y41C4A.11 protein.
Length = 386
Score = 43.2 bits (97), Expect = 2e-04
Identities = 34/114 (29%), Positives = 51/114 (44%), Gaps = 6/114 (5%)
Frame = +2
Query: 266 CPSCNTAIVTRVERVSTTKTHLFAALLCLIG----CWPCVCIPYCTNSCQNAEHYCPNCS 433
CP C T I+T V TT + L+C G CWP + I C + ++ +H CPNC
Sbjct: 36 CPKCQTTIMTSV----TTHIGMCWWLICFFGTFLFCWP-ILICLCFDVSKDVDHNCPNCG 90
Query: 434 AYIGNYSS*CSQQNSKNANCV*FIHKYMPVSSWD-HKSKPYTMTSM-IGSTLKW 589
+ S + + N F+ V S D H KP+ +T++ G+ W
Sbjct: 91 LLLAT-----SNRAAPN-----FVSHSDRVKSVDFHSEKPWILTALHTGNVQIW 134
>AC084153-15|AAK84589.2| 152|Caenorhabditis elegans Hypothetical
protein Y22D7AL.15 protein.
Length = 152
Score = 42.7 bits (96), Expect = 2e-04
Identities = 17/59 (28%), Positives = 28/59 (47%)
Frame = +2
Query: 266 CPSCNTAIVTRVERVSTTKTHLFAALLCLIGCWPCVCIPYCTNSCQNAEHYCPNCSAYI 442
CP C T++ TR T + + + CWP + C S ++ +H+CPNC +
Sbjct: 88 CPRCQTSVTTRTVHSIGTCWWIILFIGVFVFCWPILYCLCCAGS-KDVKHFCPNCGTML 145
>U23486-8|AAC46779.3| 1025|Caenorhabditis elegans Nmda class glutamate
receptor protein1 protein.
Length = 1025
Score = 38.7 bits (86), Expect = 0.004
Identities = 17/62 (27%), Positives = 27/62 (43%)
Frame = +2
Query: 266 CPSCNTAIVTRVERVSTTKTHLFAALLCLIGCWPCVCIPYCTNSCQNAEHYCPNCSAYIG 445
C C + + V R + L L ++ WPC +P +S + H CP CS +G
Sbjct: 954 CSRCRNIVESDVHRETGLFAFLSCFLFAILFLWPCSPLPCFLSSFSDFVHICPLCSHIMG 1013
Query: 446 NY 451
+
Sbjct: 1014 RF 1015
>AF318613-1|AAK01101.2| 1025|Caenorhabditis elegans NMDA-type
ionotropic glutamatereceptor NMR-1 protein.
Length = 1025
Score = 38.7 bits (86), Expect = 0.004
Identities = 17/62 (27%), Positives = 27/62 (43%)
Frame = +2
Query: 266 CPSCNTAIVTRVERVSTTKTHLFAALLCLIGCWPCVCIPYCTNSCQNAEHYCPNCSAYIG 445
C C + + V R + L L ++ WPC +P +S + H CP CS +G
Sbjct: 954 CSRCRNIVESDVHRETGLFAFLSCFLFAILFLWPCSPLPCFLSSFSDFVHICPLCSHIMG 1013
Query: 446 NY 451
+
Sbjct: 1014 RF 1015
>AF068714-8|AAC17809.2| 86|Caenorhabditis elegans Hypothetical
protein B0348.2 protein.
Length = 86
Score = 38.3 bits (85), Expect = 0.005
Identities = 19/65 (29%), Positives = 29/65 (44%)
Frame = +2
Query: 248 DPSHYTCPSCNTAIVTRVERVSTTKTHLFAALLCLIGCWPCVCIPYCTNSCQNAEHYCPN 427
+P C C VTR E + + CL+ WP +C C +S ++ HYCP+
Sbjct: 17 EPHQVFCQKCQCNQVTRTETQLGACWWVVFIIGCLL-FWP-ICYWLCCDSSKDTMHYCPS 74
Query: 428 CSAYI 442
C +
Sbjct: 75 CGTLL 79
>AL033510-7|CAA22069.1| 124|Caenorhabditis elegans Hypothetical
protein Y40H7A.11 protein.
Length = 124
Score = 34.7 bits (76), Expect = 0.062
Identities = 22/72 (30%), Positives = 31/72 (43%), Gaps = 3/72 (4%)
Frame = +2
Query: 236 QMGPDPSHY--TCPSCNTAIVTRVERVSTTKTHLFAAL-LCLIGCWPCVCIPYCTNSCQN 406
+ P S Y C C T + TRVE L A L C C + P ++
Sbjct: 51 KQAPTYSSYQENCTRCQTLVQTRVEHKIGIMWWLCATLSFCFFFCCYLLFFPIT----KD 106
Query: 407 AEHYCPNCSAYI 442
A+H+CPNC + +
Sbjct: 107 AQHFCPNCGSLL 118
>AF068714-9|AAC17810.1| 87|Caenorhabditis elegans Hypothetical
protein B0348.1 protein.
Length = 87
Score = 33.5 bits (73), Expect = 0.14
Identities = 19/73 (26%), Positives = 28/73 (38%)
Frame = +2
Query: 248 DPSHYTCPSCNTAIVTRVERVSTTKTHLFAALLCLIGCWPCVCIPYCTNSCQNAEHYCPN 427
+P CP C TR+E A + +P +C C S ++ HYCP+
Sbjct: 17 EPYSEYCPKCQCNHTTRMES-RRGNCWWIAFFIGFFLFFP-ICYWLCCQSSKDTLHYCPS 74
Query: 428 CSAYIGNYSS*CS 466
C + CS
Sbjct: 75 CGTLLATRQGGCS 87
>Z69717-1|CAA93531.1| 1391|Caenorhabditis elegans Hypothetical
protein E01G6.1 protein.
Length = 1391
Score = 33.1 bits (72), Expect = 0.19
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = -1
Query: 497 KHSSHFYYFVESINCCSFRCTRCSSGNNAQHFGSY-SCSKEC 375
K S+ +Y+ + + C SF+ T+C G NA +FGS C C
Sbjct: 270 KSSNRYYFDIGTATCRSFKFTQC--GGNANNFGSLEECEGFC 309
>AL032626-23|CAE17974.1| 88|Caenorhabditis elegans Hypothetical
protein Y37D8A.26 protein.
Length = 88
Score = 33.1 bits (72), Expect = 0.19
Identities = 17/61 (27%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Frame = +2
Query: 266 CPSCNTAIVTRVERV-STTKTHLFAALLCLIGCWPCVCIPYCTNSCQNAEHYCPNCSAYI 442
C +C + T+ E+V LF L L PC + + + H CPNC+ +
Sbjct: 27 CTNCQETVTTKTEQVFGMLNFALFITCLFL----PCFIVCFWCRCFMDVHHRCPNCNKSL 82
Query: 443 G 445
G
Sbjct: 83 G 83
>AL032626-7|CAA21544.1| 79|Caenorhabditis elegans Hypothetical
protein Y37D8A.8 protein.
Length = 79
Score = 31.9 bits (69), Expect = 0.44
Identities = 17/60 (28%), Positives = 25/60 (41%)
Frame = +2
Query: 251 PSHYTCPSCNTAIVTRVERVSTTKTHLFAALLCLIGCWPCVCIPYCTNSCQNAEHYCPNC 430
P CP C +VT VE L L+ + + + C ++A H+CPNC
Sbjct: 12 PYQEYCPRCRCTVVTVVEYEMGCFAWLIIILIIFVAFFLIYIL--CCIDIRDAIHHCPNC 69
>AF039044-8|AAG24129.1| 717|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 83 protein.
Length = 717
Score = 30.3 bits (65), Expect = 1.3
Identities = 18/71 (25%), Positives = 28/71 (39%)
Frame = -1
Query: 536 DPTKTQAYIYV*TKHSSHFYYFVESINCCSFRCTRCSSGNNAQHFGSYSCSKECKRMANN 357
DP Y V T+ + H +E S C C ++ +HFG SC + C
Sbjct: 337 DPKHVSEYREVITEKAEHLLDDMEPPLYLSGPCVICDQPSHGRHFGVLSC-RACAAFFRR 395
Query: 356 LLSKEEQQTDV 324
L + + D+
Sbjct: 396 ALRRSAKSQDM 406
>U46675-1|AAB52645.2| 524|Caenorhabditis elegans Hypothetical
protein F35A5.4 protein.
Length = 524
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = +2
Query: 374 CIPYCTNSCQNAEHYCPNCSAYIGNYSS*CSQQN 475
C+P C +C +A CS N S CSQ N
Sbjct: 199 CVPACMPACSSACVQAVTCSTCTNNCPSICSQAN 232
>AF078785-11|AAC27097.2| 294|Caenorhabditis elegans Hypothetical
protein C04E12.12 protein.
Length = 294
Score = 29.9 bits (64), Expect = 1.8
Identities = 18/64 (28%), Positives = 29/64 (45%)
Frame = +3
Query: 33 ITGNLVRDLCLTKLKWPMLNIKQICLAHTSYRRIRTRHRTSPNHNQEYILHILPYLLNRS 212
I+G +V K K +NIK + LAHTS+ + + + Y I+ Y N +
Sbjct: 23 ISGRVVLSTTKEKYKARAVNIKILGLAHTSWTDTERVRKVNAEGKEAYETKIVNYSANVN 82
Query: 213 WQSY 224
+ Y
Sbjct: 83 YLDY 86
>AF002198-10|AAF99937.1| 471|Caenorhabditis elegans Hypothetical
protein F35F10.12 protein.
Length = 471
Score = 29.9 bits (64), Expect = 1.8
Identities = 18/64 (28%), Positives = 29/64 (45%)
Frame = +3
Query: 33 ITGNLVRDLCLTKLKWPMLNIKQICLAHTSYRRIRTRHRTSPNHNQEYILHILPYLLNRS 212
I+G +V K K +NIK + LAHTS+ + + + Y I+ Y N +
Sbjct: 23 ISGRVVLSTTKEKYKARAVNIKILGLAHTSWTDTERVRKVNAEGKETYETKIVNYSANVN 82
Query: 213 WQSY 224
+ Y
Sbjct: 83 YLDY 86
>Z19156-1|CAA79563.1| 160|Caenorhabditis elegans Hypothetical
protein T02C1.1 protein.
Length = 160
Score = 29.5 bits (63), Expect = 2.3
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = +2
Query: 347 CLIGCWPCVCIPYCTNSCQNAEHYCPNCSAYIGN 448
C+I C C +C S N CP C A+ GN
Sbjct: 19 CIIECGHSYC-RFCIESHLNINEKCPLCRAHTGN 51
>U29377-3|AAA68720.2| 472|Caenorhabditis elegans Hypothetical
protein K05F1.5 protein.
Length = 472
Score = 29.1 bits (62), Expect = 3.1
Identities = 16/67 (23%), Positives = 27/67 (40%), Gaps = 1/67 (1%)
Frame = +2
Query: 254 SHYTCPSCNTAIVTRVERVSTTKTHLFAALLCLIGCWPCVCIP-YCTNSCQNAEHYCPNC 430
+H+ C C+ +V ++ H + IG C+ C N+ +N CP+
Sbjct: 121 AHFHCKICDQ-VVWNTNQMHLRTLHFLILIGIFIGGQTLGCMKKVCGNNAKNDFRRCPDT 179
Query: 431 SAYIGNY 451
GNY
Sbjct: 180 DGSCGNY 186
>AL031629-6|CAA20980.2| 948|Caenorhabditis elegans Hypothetical
protein Y106G6D.7 protein.
Length = 948
Score = 29.1 bits (62), Expect = 3.1
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +2
Query: 98 ADLSGTHFVPPHQNPPPYVTQPQ 166
ADLS T +PP NPPP PQ
Sbjct: 203 ADLSNTRSLPPVNNPPPPHPIPQ 225
>U64857-2|AAC25867.1| 1558|Caenorhabditis elegans Hypothetical protein
C37C3.6a protein.
Length = 1558
Score = 28.3 bits (60), Expect = 5.4
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = -1
Query: 482 FYYFVESINCCSFRCTRCSSGNNAQHFGSY-SCSKECKRMANNLLS 348
+YY V + +C +F+ T C G NA F S C C + A+ S
Sbjct: 1391 WYYEVATGSCVTFKYTGC--GGNANRFASKDQCESLCVKPASEAAS 1434
>U64857-1|AAC25868.1| 2167|Caenorhabditis elegans Hypothetical protein
C37C3.6b protein.
Length = 2167
Score = 28.3 bits (60), Expect = 5.4
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = -1
Query: 482 FYYFVESINCCSFRCTRCSSGNNAQHFGSY-SCSKECKRMANNLLS 348
+YY V + +C +F+ T C G NA F S C C + A+ S
Sbjct: 1391 WYYEVATGSCVTFKYTGC--GGNANRFASKDQCESLCVKPASEAAS 1434
>U41559-10|AAC24264.2| 371|Caenorhabditis elegans Hypothetical
protein C26B2.4 protein.
Length = 371
Score = 28.3 bits (60), Expect = 5.4
Identities = 31/114 (27%), Positives = 46/114 (40%)
Frame = +1
Query: 307 CFHDKDTSVCCSSLLNRLLAMRLHSLLHE*LPKC*ALLPELQRVHRKLQQLMLSTK**KC 486
C ++ S C NRL+ L S +HE + K P +R + L+ L L
Sbjct: 131 CENNYCESNMCREEENRLIDRMLSSTVHELIQKTSPQCPRFKRDWKPLEMLNLENFCRSW 190
Query: 487 ELCLVHT*IYACVFVGS*IQTIYYDFDDRIHTKMVLSPCS*FLYMY*LTKLYLC 648
+VH +A F + D R L+PCS FL M T++ +C
Sbjct: 191 SRSIVHFLDFATRFP---VFNQLSHIDKRAWFISRLAPCS-FLTMAYQTRIEMC 240
>AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical
protein Y113G7B.23 protein.
Length = 789
Score = 28.3 bits (60), Expect = 5.4
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +2
Query: 125 PPHQNPPPYVTQPQPG 172
PP Q PPY QP PG
Sbjct: 707 PPQQQRPPYQAQPYPG 722
>AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like
protein protein.
Length = 789
Score = 28.3 bits (60), Expect = 5.4
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +2
Query: 125 PPHQNPPPYVTQPQPG 172
PP Q PPY QP PG
Sbjct: 707 PPQQQRPPYQAQPYPG 722
>AJ871144-1|CAI38753.2| 476|Caenorhabditis elegans
UDP-galactopyranose mutase protein.
Length = 476
Score = 27.5 bits (58), Expect = 9.4
Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +3
Query: 93 IKQICLAHTSYRRIRTRHRTSPNHNQEYIL-HILPYLLNRSWQSY 224
+K CLA R + T+P++ +E++L H P +LN ++ Y
Sbjct: 123 VKNRCLADLKERYENPQDGTTPDNFEEWVLQHFGPTILNTFFKPY 167
>AF125442-8|AAD12787.2| 476|Caenorhabditis elegans Hypothetical
protein H04M03.4 protein.
Length = 476
Score = 27.5 bits (58), Expect = 9.4
Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +3
Query: 93 IKQICLAHTSYRRIRTRHRTSPNHNQEYIL-HILPYLLNRSWQSY 224
+K CLA R + T+P++ +E++L H P +LN ++ Y
Sbjct: 123 VKNRCLADLKERYENPQDGTTPDNFEEWVLQHFGPTILNTFFKPY 167
>AC024830-9|ABQ13052.1| 1594|Caenorhabditis elegans Hypothetical
protein Y55F3BR.2 protein.
Length = 1594
Score = 27.5 bits (58), Expect = 9.4
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = -1
Query: 482 FYYFVESINCCSFRCTRCSSGNNAQHFGSYSCSKECKRM 366
F+Y E+ C SF T C GNN + C CK +
Sbjct: 605 FWYNAETKTCESFLYTGC-QGNNNRFNSLNECQSYCKNI 642
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,040,551
Number of Sequences: 27780
Number of extensions: 354936
Number of successful extensions: 1322
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1192
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1310
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1560745544
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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