Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt4o16
         (695 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S57284-1|AAB25906.1|  437|Caenorhabditis elegans S-adenosylhomoc...   262   2e-70
M64306-1|AAA28062.1|  437|Caenorhabditis elegans S-adenosylhomoc...   262   2e-70
AF043699-5|AAB97565.1|  437|Caenorhabditis elegans Hypothetical ...   262   2e-70

>S57284-1|AAB25906.1|  437|Caenorhabditis elegans
           S-adenosylhomocysteine hydrolase protein.
          Length = 437

 Score =  262 bits (642), Expect = 2e-70
 Identities = 122/181 (67%), Positives = 140/181 (77%)
 Frame = +2

Query: 152 KPPYKIADEKLAEWGRKEIMLXXKEXPGLMACXRKYAPAKILKGAXIAGSLHMTVXTAVL 331
           KP YK+AD KLA++GRKEI+L   E PGLMA   KY P++ LKGA IAG LHMT+ TAVL
Sbjct: 5   KPAYKVADIKLADFGRKEIILAENEMPGLMAMRSKYGPSQPLKGARIAGCLHMTIQTAVL 64

Query: 332 IETLXXLGAEVQWSSSNXYSTQDEAAAALVAVGIPIYAWKGETDDEYIWCIEQTLIFPDG 511
           IETL  LGAEVQWSS N +STQD AAAA+   G+P+YAWKGETD+EY WCIEQT++F DG
Sbjct: 65  IETLTALGAEVQWSSCNIFSTQDHAAAAIAQTGVPVYAWKGETDEEYEWCIEQTIVFKDG 124

Query: 512 KPLXMILDDGGDLTNLVHTKYPDLLKDVXGIXXXXXXGVHNLYKMFREGLLKVPAINVND 691
           +PL MILDDGGDLTNLVH KYP  L  + G+      GVHNL KM  +G LKVPAINVND
Sbjct: 125 QPLNMILDDGGDLTNLVHAKYPQYLAGIRGLSEETTTGVHNLAKMLAKGDLKVPAINVND 184

Query: 692 S 694
           S
Sbjct: 185 S 185


>M64306-1|AAA28062.1|  437|Caenorhabditis elegans
           S-adenosylhomocysteine hydrolase protein.
          Length = 437

 Score =  262 bits (642), Expect = 2e-70
 Identities = 122/181 (67%), Positives = 140/181 (77%)
 Frame = +2

Query: 152 KPPYKIADEKLAEWGRKEIMLXXKEXPGLMACXRKYAPAKILKGAXIAGSLHMTVXTAVL 331
           KP YK+AD KLA++GRKEI+L   E PGLMA   KY P++ LKGA IAG LHMT+ TAVL
Sbjct: 5   KPAYKVADIKLADFGRKEIILAENEMPGLMAMRSKYGPSQPLKGARIAGCLHMTIQTAVL 64

Query: 332 IETLXXLGAEVQWSSSNXYSTQDEAAAALVAVGIPIYAWKGETDDEYIWCIEQTLIFPDG 511
           IETL  LGAEVQWSS N +STQD AAAA+   G+P+YAWKGETD+EY WCIEQT++F DG
Sbjct: 65  IETLTALGAEVQWSSCNIFSTQDHAAAAIAQTGVPVYAWKGETDEEYEWCIEQTIVFKDG 124

Query: 512 KPLXMILDDGGDLTNLVHTKYPDLLKDVXGIXXXXXXGVHNLYKMFREGLLKVPAINVND 691
           +PL MILDDGGDLTNLVH KYP  L  + G+      GVHNL KM  +G LKVPAINVND
Sbjct: 125 QPLNMILDDGGDLTNLVHAKYPQYLAGIRGLSEETTTGVHNLAKMLAKGDLKVPAINVND 184

Query: 692 S 694
           S
Sbjct: 185 S 185


>AF043699-5|AAB97565.1|  437|Caenorhabditis elegans Hypothetical
           protein K02F2.2 protein.
          Length = 437

 Score =  262 bits (642), Expect = 2e-70
 Identities = 122/181 (67%), Positives = 140/181 (77%)
 Frame = +2

Query: 152 KPPYKIADEKLAEWGRKEIMLXXKEXPGLMACXRKYAPAKILKGAXIAGSLHMTVXTAVL 331
           KP YK+AD KLA++GRKEI+L   E PGLMA   KY P++ LKGA IAG LHMT+ TAVL
Sbjct: 5   KPAYKVADIKLADFGRKEIILAENEMPGLMAMRSKYGPSQPLKGARIAGCLHMTIQTAVL 64

Query: 332 IETLXXLGAEVQWSSSNXYSTQDEAAAALVAVGIPIYAWKGETDDEYIWCIEQTLIFPDG 511
           IETL  LGAEVQWSS N +STQD AAAA+   G+P+YAWKGETD+EY WCIEQT++F DG
Sbjct: 65  IETLTALGAEVQWSSCNIFSTQDHAAAAIAQTGVPVYAWKGETDEEYEWCIEQTIVFKDG 124

Query: 512 KPLXMILDDGGDLTNLVHTKYPDLLKDVXGIXXXXXXGVHNLYKMFREGLLKVPAINVND 691
           +PL MILDDGGDLTNLVH KYP  L  + G+      GVHNL KM  +G LKVPAINVND
Sbjct: 125 QPLNMILDDGGDLTNLVHAKYPQYLAGIRGLSEETTTGVHNLAKMLAKGDLKVPAINVND 184

Query: 692 S 694
           S
Sbjct: 185 S 185


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,964,254
Number of Sequences: 27780
Number of extensions: 255839
Number of successful extensions: 455
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 450
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 454
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1602927856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)