Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt4o09
         (173 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81107-1|CAB03225.1|  258|Caenorhabditis elegans Hypothetical pr...    25   7.2  
U41543-11|AAP40530.1|  362|Caenorhabditis elegans Hypothetical p...    25   7.2  
U41543-9|AAB37021.2|  453|Caenorhabditis elegans Hypothetical pr...    25   7.2  
Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical p...    25   9.5  
Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical p...    25   9.5  
Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical p...    25   9.5  
Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical pr...    25   9.5  
Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical pr...    25   9.5  
Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical pr...    25   9.5  
X15423-1|CAA33463.1| 6048|Caenorhabditis elegans twitchin protein.     25   9.5  

>Z81107-1|CAB03225.1|  258|Caenorhabditis elegans Hypothetical
           protein R07H5.1 protein.
          Length = 258

 Score = 25.0 bits (52), Expect = 7.2
 Identities = 11/39 (28%), Positives = 23/39 (58%)
 Frame = -3

Query: 126 LAVLYVLTMSKHNFVPLLAISMCFSVEAIAICHTRTAST 10
           ++ +  L +S+HNF P++  S+  S+ +     T T++T
Sbjct: 183 ISTIKSLLLSQHNFAPIVTPSVTSSIPSWQQSATPTSAT 221


>U41543-11|AAP40530.1|  362|Caenorhabditis elegans Hypothetical
           protein F46H5.2b protein.
          Length = 362

 Score = 25.0 bits (52), Expect = 7.2
 Identities = 9/27 (33%), Positives = 18/27 (66%)
 Frame = +2

Query: 62  IEMANRGTKLCFDIVRTYSTAKMPPTD 142
           +EM++ GT++  D++R  + A +P  D
Sbjct: 329 VEMSDNGTEVDDDLIRAATEAPLPDDD 355


>U41543-9|AAB37021.2|  453|Caenorhabditis elegans Hypothetical
           protein F46H5.2a protein.
          Length = 453

 Score = 25.0 bits (52), Expect = 7.2
 Identities = 9/27 (33%), Positives = 18/27 (66%)
 Frame = +2

Query: 62  IEMANRGTKLCFDIVRTYSTAKMPPTD 142
           +EM++ GT++  D++R  + A +P  D
Sbjct: 420 VEMSDNGTEVDDDLIRAATEAPLPDDD 446


>Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical
            protein ZK617.1c protein.
          Length = 6629

 Score = 24.6 bits (51), Expect = 9.5
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +3

Query: 33   ILQSPQQRNTSKWLIEEQNYASTS 104
            + ++PQ  +T KW +E  N A T+
Sbjct: 1031 VFKNPQLADTGKWALELGNSAGTA 1054


>Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical
            protein ZK617.1b protein.
          Length = 7158

 Score = 24.6 bits (51), Expect = 9.5
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +3

Query: 33   ILQSPQQRNTSKWLIEEQNYASTS 104
            + ++PQ  +T KW +E  N A T+
Sbjct: 1560 VFKNPQLADTGKWALELGNSAGTA 1583


>Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical
            protein ZK617.1a protein.
          Length = 6839

 Score = 24.6 bits (51), Expect = 9.5
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +3

Query: 33   ILQSPQQRNTSKWLIEEQNYASTS 104
            + ++PQ  +T KW +E  N A T+
Sbjct: 1241 VFKNPQLADTGKWALELGNSAGTA 1264


>Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical protein
            ZK617.1c protein.
          Length = 6629

 Score = 24.6 bits (51), Expect = 9.5
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +3

Query: 33   ILQSPQQRNTSKWLIEEQNYASTS 104
            + ++PQ  +T KW +E  N A T+
Sbjct: 1031 VFKNPQLADTGKWALELGNSAGTA 1054


>Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical protein
            ZK617.1b protein.
          Length = 7158

 Score = 24.6 bits (51), Expect = 9.5
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +3

Query: 33   ILQSPQQRNTSKWLIEEQNYASTS 104
            + ++PQ  +T KW +E  N A T+
Sbjct: 1560 VFKNPQLADTGKWALELGNSAGTA 1583


>Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical protein
            ZK617.1a protein.
          Length = 6839

 Score = 24.6 bits (51), Expect = 9.5
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +3

Query: 33   ILQSPQQRNTSKWLIEEQNYASTS 104
            + ++PQ  +T KW +E  N A T+
Sbjct: 1241 VFKNPQLADTGKWALELGNSAGTA 1264


>X15423-1|CAA33463.1| 6048|Caenorhabditis elegans twitchin protein.
          Length = 6048

 Score = 24.6 bits (51), Expect = 9.5
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +3

Query: 33  ILQSPQQRNTSKWLIEEQNYASTS 104
           + ++PQ  +T KW +E  N A T+
Sbjct: 450 VFKNPQLADTGKWALELGNSAGTA 473


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,104,711
Number of Sequences: 27780
Number of extensions: 62852
Number of successful extensions: 198
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 192
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 198
length of database: 12,740,198
effective HSP length: 38
effective length of database: 11,684,558
effective search space used: 222006602
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)