Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt4o08
(307 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_7913| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 5e-06
SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.026
SB_39786| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.19
SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.24
SB_46036| Best HMM Match : PSRT (HMM E-Value=1) 30 0.32
SB_23556| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.43
SB_16697| Best HMM Match : Collagen (HMM E-Value=4.2e-11) 29 0.57
SB_43189| Best HMM Match : PGAMP (HMM E-Value=2.1) 29 0.75
SB_20476| Best HMM Match : AT_hook (HMM E-Value=0.014) 29 0.75
SB_19124| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 1.3
SB_37693| Best HMM Match : PHD (HMM E-Value=8.7e-35) 28 1.3
SB_9087| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 1.3
SB_16095| Best HMM Match : Podocalyxin (HMM E-Value=1) 28 1.7
SB_58050| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 1.7
SB_31178| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 1.7
SB_55186| Best HMM Match : TPR_2 (HMM E-Value=0.91) 27 2.3
SB_46720| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 2.3
SB_28630| Best HMM Match : DUF1665 (HMM E-Value=3.4) 27 2.3
SB_27558| Best HMM Match : dsrm (HMM E-Value=9.6e-18) 27 2.3
SB_8004| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 2.3
SB_41435| Best HMM Match : Cu2_monoox_C (HMM E-Value=4e-36) 27 3.0
SB_31697| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 3.0
SB_26402| Best HMM Match : K-box (HMM E-Value=1) 27 3.0
SB_25350| Best HMM Match : Collagen (HMM E-Value=0) 27 3.0
SB_19504| Best HMM Match : FH2 (HMM E-Value=1.2e-30) 27 3.0
SB_59620| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 3.0
SB_51968| Best HMM Match : PT (HMM E-Value=0.54) 27 3.0
SB_43996| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 3.0
SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10) 27 3.0
SB_33497| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 3.0
SB_32907| Best HMM Match : Gly_radical (HMM E-Value=6) 27 3.0
SB_31286| Best HMM Match : HEAT (HMM E-Value=0.092) 27 3.0
SB_2236| Best HMM Match : PkinA_anch (HMM E-Value=3.3) 27 3.0
SB_49940| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.0
SB_49727| Best HMM Match : RVT_1 (HMM E-Value=4.5e-07) 27 4.0
SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05) 27 4.0
SB_38313| Best HMM Match : XYPPX (HMM E-Value=0.069) 27 4.0
SB_22158| Best HMM Match : Lipoprotein_15 (HMM E-Value=8.4) 27 4.0
SB_34481| Best HMM Match : Extensin_2 (HMM E-Value=0.48) 27 4.0
SB_28880| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.0
SB_46160| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 5.3
SB_40971| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 5.3
SB_6936| Best HMM Match : TP2 (HMM E-Value=1.1) 26 5.3
SB_44956| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 5.3
SB_20512| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 5.3
SB_7731| Best HMM Match : Extensin_2 (HMM E-Value=1.2) 26 5.3
SB_39808| Best HMM Match : EGF_CA (HMM E-Value=6.3e-35) 26 7.0
SB_39039| Best HMM Match : Drf_FH1 (HMM E-Value=6.4) 26 7.0
SB_24641| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 7.0
SB_17315| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 7.0
SB_14911| Best HMM Match : Amelogenin (HMM E-Value=1.7) 26 7.0
SB_48021| Best HMM Match : Transposase_5 (HMM E-Value=0.16) 25 9.2
SB_34906| Best HMM Match : Cadherin (HMM E-Value=0) 25 9.2
SB_29610| Best HMM Match : Extensin_2 (HMM E-Value=2.3) 25 9.2
SB_28528| Best HMM Match : TUDOR (HMM E-Value=0.34) 25 9.2
SB_23288| Best HMM Match : MMR_HSR1 (HMM E-Value=8.3e-06) 25 9.2
SB_20899| Best HMM Match : RRM_1 (HMM E-Value=2.3e-15) 25 9.2
SB_5192| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 9.2
SB_53582| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 9.2
SB_41093| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 9.2
SB_31002| Best HMM Match : RhoGAP (HMM E-Value=0) 25 9.2
SB_30029| Best HMM Match : Extensin_2 (HMM E-Value=0.45) 25 9.2
SB_27977| Best HMM Match : ARID (HMM E-Value=1.6e-26) 25 9.2
SB_26487| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 9.2
SB_23411| Best HMM Match : Glyco_transf_8 (HMM E-Value=8.4e-15) 25 9.2
SB_21662| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 9.2
SB_3882| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 9.2
>SB_7913| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 336
Score = 46.4 bits (105), Expect = 5e-06
Identities = 27/71 (38%), Positives = 32/71 (45%)
Frame = -1
Query: 286 SPAGHPSGRCRAVSRDIRTTTEARRPGTARNTRRPKPTELSACCRERSETPRHRNKPSRP 107
SPA H R R+ SR R +R P R +R P P S R RS +PR R+ SR
Sbjct: 215 SPAHHRRSRSRSRSRSPRRRRRSRSPRRRRRSRSPSPHHRSHRSRSRSRSPRRRHSRSRS 274
Query: 106 VWSRRSPHHFH 74
RR H
Sbjct: 275 PTHRRHRSRSH 285
>SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1011
Score = 33.9 bits (74), Expect = 0.026
Identities = 24/74 (32%), Positives = 33/74 (44%), Gaps = 1/74 (1%)
Frame = +2
Query: 89 TPSRPNR-SRRFIPVTGRL*ALPAASAQLCRLRTPSVSRCAWAPGLCGGPDVPAHGSAPP 265
TPS P+ S P T + P+ + TPS APG G P P+ SAP
Sbjct: 466 TPSTPSTPSTPSTPSTPSTPSTPSTPSTSSTPSTPSTPSTPSAPGTPGTPSTPSTPSAP- 524
Query: 266 GGVTGGAASPATPA 307
G ++P+TP+
Sbjct: 525 -GTPSTPSTPSTPS 537
Score = 28.3 bits (60), Expect = 1.3
Identities = 23/75 (30%), Positives = 31/75 (41%), Gaps = 2/75 (2%)
Frame = +2
Query: 89 TPSRPNR-SRRFIPVTGRL*ALPAASAQLCRLRTPSVSRCAWAPGLCGGPDVPAHGSAPP 265
TPS P+ S P T + P+ + TPS P G P P+ SAP
Sbjct: 119 TPSTPSTPSAPSTPSTPSTPSTPSTPSTPSTPSTPSTPSTPSTPITPGTPSTPSTPSAPG 178
Query: 266 GGVTGGAAS-PATPA 307
+T S P+TP+
Sbjct: 179 TPITPSTLSTPSTPS 193
Score = 27.1 bits (57), Expect = 3.0
Identities = 22/75 (29%), Positives = 31/75 (41%), Gaps = 2/75 (2%)
Frame = +2
Query: 89 TPSRPNRSRR-FIPVTGRL*ALPAASAQLCRLRTPSVSRCAWAPGLCGGPDVPAHGSAPP 265
TPS P+ + P T + P+ + TPS P G P P+ SAP
Sbjct: 669 TPSTPSLTHTPSTPSTPSTPSTPSTPSMPNTPSTPSTPSTPSTPITPGTPSTPSTPSAPG 728
Query: 266 GGVTGGAAS-PATPA 307
+T S P+TP+
Sbjct: 729 TPITPSTLSTPSTPS 743
Score = 25.8 bits (54), Expect = 7.0
Identities = 24/74 (32%), Positives = 30/74 (40%), Gaps = 1/74 (1%)
Frame = +2
Query: 89 TPSRPNRSRRFIPVTGRL*ALPAASAQLCRLRTPSVSRCAWAPGLCGGPDVPAHGSAPPG 268
TPS P+ S P T + P+A TPS APG P P+ S P
Sbjct: 487 TPSTPSTSST--PSTPSTPSTPSAPGTP---GTPSTPSTPSAPGTPSTPSTPSTPSTPST 541
Query: 269 GVTGGAAS-PATPA 307
T S P+TP+
Sbjct: 542 PSTPSTPSMPSTPS 555
Score = 25.4 bits (53), Expect = 9.2
Identities = 19/70 (27%), Positives = 26/70 (37%), Gaps = 1/70 (1%)
Frame = +2
Query: 101 PNRSRRFIPVTGRL*ALPAASAQLCRLRTPSVSRCAWAPGLCGGPDVPAHGSAPPGGVTG 280
P+R + P T + P+ + RTPS P P P S P T
Sbjct: 4 PHRLKLSTPSTPCTPSTPSTPSTPSTPRTPSTPSTPCTPSTPSTPSTPITPSTPSTPCTH 63
Query: 281 GAAS-PATPA 307
S P+TP+
Sbjct: 64 STPSAPSTPS 73
>SB_39786| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 294
Score = 31.1 bits (67), Expect = 0.19
Identities = 17/60 (28%), Positives = 27/60 (45%), Gaps = 4/60 (6%)
Frame = -1
Query: 247 SRDIRTTTEARRPGTARNTRRPKPTELSACCR----ERSETPRHRNKPSRPVWSRRSPHH 80
+RD R T R P ++ R P+P++ R +R P + + RP +R P H
Sbjct: 191 NRDTRDTINNRHPRPSQQQRHPRPSQQQRHPRPSQQQRYPRPSQQQRQPRPSQQQRYPRH 250
>SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1000
Score = 30.7 bits (66), Expect = 0.24
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = -2
Query: 294 GLAAPPVTPPGGAEP*AGTSGPPQRP 217
G A PP PPGG+ P G PP P
Sbjct: 950 GNAPPPPPPPGGSAPPPGGGAPPLPP 975
>SB_46036| Best HMM Match : PSRT (HMM E-Value=1)
Length = 878
Score = 30.3 bits (65), Expect = 0.32
Identities = 22/74 (29%), Positives = 30/74 (40%), Gaps = 2/74 (2%)
Frame = -1
Query: 295 GAXSPAGHPSGRCRAVS--RDIRTTTEARRPGTARNTRRPKPTELSACCRERSETPRHRN 122
G +P G R+ + R RT+ R P R R P P S R RS +P ++
Sbjct: 530 GQSAPVGRTKSPSRSYTSPRQRRTSPNNRSPPPRR--RSPSPRRPSPSPRRRSTSPSRKS 587
Query: 121 KPSRPVWSRRSPHH 80
P R V + H
Sbjct: 588 PPPRRVHRHQDVVH 601
>SB_23556| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 671
Score = 29.9 bits (64), Expect = 0.43
Identities = 15/59 (25%), Positives = 31/59 (52%)
Frame = +1
Query: 49 SSSISKYYNGNGVDSVETKQVEKVYSGDGASLSAPGSKRSALSASDAECFSLCLGAGPL 225
++ +S+Y ++++ + ++++Y + P S +A SD FSLC+ GPL
Sbjct: 137 NTRLSEYLESRDCEAMDVR-LQRLYEHELVMYRLPESSATATPLSDLFDFSLCMCYGPL 194
>SB_16697| Best HMM Match : Collagen (HMM E-Value=4.2e-11)
Length = 1903
Score = 29.5 bits (63), Expect = 0.57
Identities = 16/33 (48%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Frame = -2
Query: 306 AGVAGLAAPPVTP-PGGAEP*AGTSGPPQRPGA 211
AG GL PP P P G + G GPP PGA
Sbjct: 1819 AGPPGLDGPPGPPGPQGPKGWPGVPGPPGPPGA 1851
Score = 26.2 bits (55), Expect = 5.3
Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = -2
Query: 303 GVAGLAAPP-VTPPGGAEP*AGTSGPPQRPGA 211
G +G+ PP + P G + G GPP PGA
Sbjct: 1777 GASGVDGPPGLAGPQGPKGMPGPPGPPGPPGA 1808
>SB_43189| Best HMM Match : PGAMP (HMM E-Value=2.1)
Length = 461
Score = 29.1 bits (62), Expect = 0.75
Identities = 17/57 (29%), Positives = 22/57 (38%)
Frame = -1
Query: 253 AVSRDIRTTTEARRPGTARNTRRPKPTELSACCRERSETPRHRNKPSRPVWSRRSPH 83
A+ + T RP + R R P S R +T PSRP + R PH
Sbjct: 4 ALHNTLTRTRVPSRPCSLRTVRHPHTGTKSTMAYARDDTLTRTRVPSRPSRTVRHPH 60
>SB_20476| Best HMM Match : AT_hook (HMM E-Value=0.014)
Length = 475
Score = 29.1 bits (62), Expect = 0.75
Identities = 15/39 (38%), Positives = 18/39 (46%)
Frame = -2
Query: 303 GVAGLAAPPVTPPGGAEP*AGTSGPPQRPGAQAQRETLG 187
G A A+PPVT P G G P + P A + T G
Sbjct: 253 GQATTASPPVTKPVGGPVKRGRGRPRKNPDAPSNNNTSG 291
>SB_19124| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 224
Score = 28.3 bits (60), Expect = 1.3
Identities = 15/54 (27%), Positives = 26/54 (48%)
Frame = -1
Query: 247 SRDIRTTTEARRPGTARNTRRPKPTELSACCRERSETPRHRNKPSRPVWSRRSP 86
+RD R T R P ++ R P+P++ ++R P + + RP +R P
Sbjct: 151 NRDTRDTINNRHPRPSQQQRYPRPSQ-----QQRYPRPSQQQRHPRPSQQQRHP 199
>SB_37693| Best HMM Match : PHD (HMM E-Value=8.7e-35)
Length = 2049
Score = 28.3 bits (60), Expect = 1.3
Identities = 14/51 (27%), Positives = 27/51 (52%)
Frame = -1
Query: 286 SPAGHPSGRCRAVSRDIRTTTEARRPGTARNTRRPKPTELSACCRERSETP 134
+P S RC+ ++ ++ ++PG+A +PK + S R+RS +P
Sbjct: 1886 TPGFSQSRRCKTTAKALKKAKGKQKPGSATKKTKPK-QDSSKKKRKRSPSP 1935
>SB_9087| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 831
Score = 28.3 bits (60), Expect = 1.3
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +2
Query: 194 VSRCAWAPGLCGGPDVPAHGS 256
++R W+ LCGGPD+ GS
Sbjct: 108 ITRSWWSSRLCGGPDINDDGS 128
>SB_16095| Best HMM Match : Podocalyxin (HMM E-Value=1)
Length = 768
Score = 27.9 bits (59), Expect = 1.7
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = -2
Query: 297 AGLAAPPVTPPGGAEP*AGTSGPPQRPGAQA 205
AG PP PPGG A PP PG A
Sbjct: 658 AGPPPPPPPPPGGQAGGAPPPPPPPLPGGAA 688
>SB_58050| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 307
Score = 27.9 bits (59), Expect = 1.7
Identities = 17/36 (47%), Positives = 18/36 (50%), Gaps = 5/36 (13%)
Frame = -2
Query: 303 GVAGLAAPPVTPPG-----GAEP*AGTSGPPQRPGA 211
G G+A PP PPG GA G GPP PGA
Sbjct: 97 GQVGMAGPP-GPPGHVGEDGAPGAPGAPGPPGSPGA 131
>SB_31178| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 281
Score = 27.9 bits (59), Expect = 1.7
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -3
Query: 230 HHRGPAPRHSEKHSASEADRAER 162
H GP+ RHS H +E++ A+R
Sbjct: 123 HKEGPSSRHSNVHELNESELAKR 145
>SB_55186| Best HMM Match : TPR_2 (HMM E-Value=0.91)
Length = 571
Score = 27.5 bits (58), Expect = 2.3
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = -2
Query: 297 AGLAAPPVTPPGGAEP*AGTSGPP--QRPGAQAQRE 196
AGL++PP +P GGA PP Q+P A +++
Sbjct: 526 AGLSSPPGSPGGGATSAPSNVVPPRQQQPAAAKKKQ 561
Score = 26.2 bits (55), Expect = 5.3
Identities = 16/47 (34%), Positives = 20/47 (42%)
Frame = -2
Query: 273 TPPGGAEP*AGTSGPPQRPGAQAQRETLGVRSRQS*ALAAGSAQRRP 133
+P A P AG S PP PG A V + AA ++RP
Sbjct: 517 SPKTPASPKAGLSSPPGSPGGGATSAPSNVVPPRQQQPAAAKKKQRP 563
>SB_46720| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1705
Score = 27.5 bits (58), Expect = 2.3
Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = -2
Query: 297 AGLAAPPVTP-PGGAEP*AGTSGPPQRPGAQAQRETLGVR 181
AG PP P P G AG G P +PGA+ + G+R
Sbjct: 928 AGPRGPPGEPGPPGPFGAAGLDGMPGKPGAKGESGQPGMR 967
>SB_28630| Best HMM Match : DUF1665 (HMM E-Value=3.4)
Length = 428
Score = 27.5 bits (58), Expect = 2.3
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = -3
Query: 266 RAVQSREQGHQDHHRGPAPRHSEKHSASEADRAER 162
R +SR H+DH PR S HS D ER
Sbjct: 205 RRSRSRSLRHEDHDDA-TPRRSRSHSLRHEDEEER 238
>SB_27558| Best HMM Match : dsrm (HMM E-Value=9.6e-18)
Length = 765
Score = 27.5 bits (58), Expect = 2.3
Identities = 22/70 (31%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
Frame = -1
Query: 286 SPAGHPSGRCRAVSRDIRTTTEARRPGTARNT--RRPKPTELSACCRERSETPRHRNKPS 113
S H R + SR R+ +R P R + R P+ S+ CR R R R+ S
Sbjct: 271 SSRSHRKHRSHSRSRSPRSK-RSRSPRKRRRSKSRSPRRYRDSSSCRRRRSRSRSRSPKS 329
Query: 112 RPVWSRRSPH 83
R RSP+
Sbjct: 330 RLRSRSRSPY 339
>SB_8004| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 989
Score = 27.5 bits (58), Expect = 2.3
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = -1
Query: 286 SPAGHPSGRCRAVSRDIRTTTEARRPGTARN 194
S +G+P+GR R+V+R IR T+ G N
Sbjct: 599 SGSGYPAGRPRSVARAIRKKTQQTGVGIVGN 629
>SB_41435| Best HMM Match : Cu2_monoox_C (HMM E-Value=4e-36)
Length = 821
Score = 27.1 bits (57), Expect = 3.0
Identities = 22/74 (29%), Positives = 27/74 (36%), Gaps = 1/74 (1%)
Frame = -1
Query: 304 RGSGAXSPAGHPSGRCRAVSRDI-RTTTEARRPGTARNTRRPKPTELSACCRERSETPRH 128
R G + P GR R R T E R PG N +RP + C T +
Sbjct: 302 RPPGRVTNQKRPPGRVTNKKRPPGRVTNEKRPPGRVTNEKRPPGKVTNQKCPPSRVTNKK 361
Query: 127 RNKPSRPVWSRRSP 86
R P R +R P
Sbjct: 362 R-PPGRITNEKRPP 374
Score = 26.6 bits (56), Expect = 4.0
Identities = 21/74 (28%), Positives = 29/74 (39%), Gaps = 1/74 (1%)
Frame = -1
Query: 304 RGSGAXSPAGHPSGRCRAVSRDI-RTTTEARRPGTARNTRRPKPTELSACCRERSETPRH 128
R G + P GR R R T + R PG N +RP P ++ R +
Sbjct: 292 RPPGRITNQKRPPGRVTNQKRPPGRVTNKKRPPGRVTNEKRP-PGRVTNEKRPPGKVTNQ 350
Query: 127 RNKPSRPVWSRRSP 86
+ PSR +R P
Sbjct: 351 KCPPSRVTNKKRPP 364
Score = 26.6 bits (56), Expect = 4.0
Identities = 21/74 (28%), Positives = 29/74 (39%), Gaps = 1/74 (1%)
Frame = -1
Query: 304 RGSGAXSPAGHPSGRCRAVSRDI-RTTTEARRPGTARNTRRPKPTELSACCRERSETPRH 128
R G + P GR R R T + R PG N +RP P ++ R +
Sbjct: 392 RPPGRITNQKRPPGRVTNQKRPPGRVTNKKRPPGRVTNQKRP-PGRVTNEKRPPGKVTNQ 450
Query: 127 RNKPSRPVWSRRSP 86
+ PSR +R P
Sbjct: 451 KCPPSRVTNKKRPP 464
Score = 26.6 bits (56), Expect = 4.0
Identities = 21/74 (28%), Positives = 27/74 (36%), Gaps = 1/74 (1%)
Frame = -1
Query: 304 RGSGAXSPAGHPSGRCRAVSRDI-RTTTEARRPGTARNTRRPKPTELSACCRERSETPRH 128
R G + P GR R R T + R PG N +RP + C T +
Sbjct: 402 RPPGRVTNQKRPPGRVTNKKRPPGRVTNQKRPPGRVTNEKRPPGKVTNQKCPPSRVTNKK 461
Query: 127 RNKPSRPVWSRRSP 86
R P R +R P
Sbjct: 462 R-PPGRETNKKRPP 474
Score = 26.2 bits (55), Expect = 5.3
Identities = 18/63 (28%), Positives = 24/63 (38%), Gaps = 1/63 (1%)
Frame = -1
Query: 271 PSGRCRAVSRDI-RTTTEARRPGTARNTRRPKPTELSACCRERSETPRHRNKPSRPVWSR 95
P GR R R T + R PG N +RP P ++ R + P R +
Sbjct: 363 PPGRITNEKRPPGRVTNQKRPPGRVTNKKRP-PGRITNQKRPPGRVTNQKRPPGRVTNKK 421
Query: 94 RSP 86
R P
Sbjct: 422 RPP 424
Score = 25.4 bits (53), Expect = 9.2
Identities = 20/74 (27%), Positives = 27/74 (36%), Gaps = 1/74 (1%)
Frame = -1
Query: 304 RGSGAXSPAGHPSGRCRAVSRDI-RTTTEARRPGTARNTRRPKPTELSACCRERSETPRH 128
R G + P GR R R T E R PG N + P P+ ++ R
Sbjct: 312 RPPGRVTNKKRPPGRVTNEKRPPGRVTNEKRPPGKVTNQKCP-PSRVTNKKRPPGRITNE 370
Query: 127 RNKPSRPVWSRRSP 86
+ P R +R P
Sbjct: 371 KRPPGRVTNQKRPP 384
Score = 25.4 bits (53), Expect = 9.2
Identities = 20/74 (27%), Positives = 27/74 (36%), Gaps = 1/74 (1%)
Frame = -1
Query: 304 RGSGAXSPAGHPSGRCRAVSRDI-RTTTEARRPGTARNTRRPKPTELSACCRERSETPRH 128
R G + P GR R R T E R PG N + P P+ ++ R
Sbjct: 412 RPPGRVTNKKRPPGRVTNQKRPPGRVTNEKRPPGKVTNQKCP-PSRVTNKKRPPGRETNK 470
Query: 127 RNKPSRPVWSRRSP 86
+ P R +R P
Sbjct: 471 KRPPGRVTNKKRQP 484
>SB_31697| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 518
Score = 27.1 bits (57), Expect = 3.0
Identities = 13/46 (28%), Positives = 25/46 (54%)
Frame = -1
Query: 223 EARRPGTARNTRRPKPTELSACCRERSETPRHRNKPSRPVWSRRSP 86
E ++P A+ T + S+ ++ + +P + PS+P WSR +P
Sbjct: 432 EEKKPLEAKTTPNVG-SGASSAFQKNTPSPSPKTTPSKPSWSRPTP 476
>SB_26402| Best HMM Match : K-box (HMM E-Value=1)
Length = 166
Score = 27.1 bits (57), Expect = 3.0
Identities = 15/73 (20%), Positives = 33/73 (45%)
Frame = +1
Query: 7 RLSKMTMLIQQLNCSSSISKYYNGNGVDSVETKQVEKVYSGDGASLSAPGSKRSALSASD 186
+L + ++QQ++ S + VDS++ + EK + + SK+ L+++
Sbjct: 70 KLGETEYILQQMDSSVKQTAAIKEKDVDSLQQQLAEKDRRIEELNSKLESSKKDVLNSNQ 129
Query: 187 AECFSLCLGAGPL 225
+C GP+
Sbjct: 130 EKCLEKFKANGPV 142
>SB_25350| Best HMM Match : Collagen (HMM E-Value=0)
Length = 1112
Score = 27.1 bits (57), Expect = 3.0
Identities = 18/51 (35%), Positives = 20/51 (39%)
Frame = -2
Query: 303 GVAGLAAPPVTPPGGAEP*AGTSGPPQRPGAQAQRETLGVRSRQS*ALAAG 151
G GL P P G G G P PGAQ + G RQ A+G
Sbjct: 486 GPTGLTGPTGKP--GDRGSNGADGTPGEPGAQGTKRKPGTPGRQGMPGASG 534
>SB_19504| Best HMM Match : FH2 (HMM E-Value=1.2e-30)
Length = 739
Score = 27.1 bits (57), Expect = 3.0
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = -2
Query: 303 GVAGLAAPPVTPPGGAEP*AGTSGPPQR 220
G G A PP PP GA P +G P R
Sbjct: 205 GFPGGAPPPPPPPFGAPPPPALNGGPPR 232
>SB_59620| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 249
Score = 27.1 bits (57), Expect = 3.0
Identities = 12/36 (33%), Positives = 15/36 (41%)
Frame = -1
Query: 214 RPGTARNTRRPKPTELSACCRERSETPRHRNKPSRP 107
RP T +T ++CC P H N SRP
Sbjct: 184 RPETVCHTTLTLVNRTNSCCHTTPNLPSHLNTQSRP 219
>SB_51968| Best HMM Match : PT (HMM E-Value=0.54)
Length = 514
Score = 27.1 bits (57), Expect = 3.0
Identities = 15/53 (28%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
Frame = -1
Query: 256 RAVSRDIRTTTEARRPGTARNTRR--PKPTELSACCRERSETPRHRNKPSRPV 104
R R + T+ P R P+PT+ R+R T R KP++P+
Sbjct: 257 RPTERPTKKPTKPLLPEVEPEEERATPRPTKAKPTTRKRMPTERPTKKPTKPL 309
>SB_43996| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1056
Score = 27.1 bits (57), Expect = 3.0
Identities = 12/35 (34%), Positives = 14/35 (40%)
Frame = -3
Query: 227 HRGPAPRHSEKHSASEADRAERLLPGALRDAPSPE 123
H P+P HS+ E LP PSPE
Sbjct: 741 HSQPSPEHSQPSPEHSLPSQEHSLPSPEHSQPSPE 775
>SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10)
Length = 514
Score = 27.1 bits (57), Expect = 3.0
Identities = 17/39 (43%), Positives = 18/39 (46%)
Frame = +2
Query: 188 PSVSRCAWAPGLCGGPDVPAHGSAPPGGVTGGAASPATP 304
PS S P G P P+ G APP GGAA P P
Sbjct: 331 PSRSSQRPPPPSRGAPPPPSMGMAPP--PVGGAAPPPPP 367
>SB_33497| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1308
Score = 27.1 bits (57), Expect = 3.0
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Frame = +2
Query: 176 RLRTPSVSR--CAWAPGLCGGPDVPAHGSAPPGGVTGGAASP 295
R +PS +R + G G P P ++ PGG G AASP
Sbjct: 711 RASSPSGTRGPVSGPSGARGSPHQPRGRASSPGGARGRAASP 752
>SB_32907| Best HMM Match : Gly_radical (HMM E-Value=6)
Length = 390
Score = 27.1 bits (57), Expect = 3.0
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = -1
Query: 265 GRCRAVSRDIRTTTEARRPGTARNTRRPKPTELSACCRERSETPR 131
G+ A + + T ARRP RRP PT + R + TPR
Sbjct: 11 GQNNATTTGVVPTPRARRPVPTPRARRPNPTTKA---RRPAPTPR 52
>SB_31286| Best HMM Match : HEAT (HMM E-Value=0.092)
Length = 1270
Score = 27.1 bits (57), Expect = 3.0
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = -1
Query: 307 GRGSGAXSPAGHPSGRCRAVSRDIRTTTEARRPGTARNTRRPKPT 173
G G A +PAG C+A+ D ++ AR+ G T R PT
Sbjct: 1137 GAGLFAITPAGERGMCCKAIKLDTPSSPRARKFG---ETSRTSPT 1178
>SB_2236| Best HMM Match : PkinA_anch (HMM E-Value=3.3)
Length = 331
Score = 27.1 bits (57), Expect = 3.0
Identities = 17/47 (36%), Positives = 21/47 (44%)
Frame = -2
Query: 270 PPGGAEP*AGTSGPPQRPGAQAQRETLGVRSRQS*ALAAGSAQRRPV 130
P GGA G + PPQRP T+ V + A S +RPV
Sbjct: 17 PRGGA---GGANAPPQRPKVHFWFSTIDVLLVEKLGYVAKSDNKRPV 60
>SB_49940| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 569
Score = 26.6 bits (56), Expect = 4.0
Identities = 17/55 (30%), Positives = 24/55 (43%)
Frame = -3
Query: 239 HQDHHRGPAPRHSEKHSASEADRAERLLPGALRDAPSPE*TFSTCLVSTESTPFP 75
H HH RH KH+A A R + D+P+ + T +S +S FP
Sbjct: 167 HPSHHHVTKSRHQTKHNAKHATRVFSI------DSPNEDSQGKTANIS-DSASFP 214
>SB_49727| Best HMM Match : RVT_1 (HMM E-Value=4.5e-07)
Length = 1286
Score = 26.6 bits (56), Expect = 4.0
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +2
Query: 248 HGSAPPGGVTGGAASPATPA 307
H S PP + GG +P TP+
Sbjct: 508 HPSTPPRSINGGCTAPNTPS 527
>SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05)
Length = 480
Score = 26.6 bits (56), Expect = 4.0
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = -2
Query: 282 PPVTPPGGAEP*AGTSGPPQRPGAQAQRETL 190
PP PPG P + SGP + P + R L
Sbjct: 3 PPPPPPGPPPPPSAPSGPVKPPPSSKNRGAL 33
>SB_38313| Best HMM Match : XYPPX (HMM E-Value=0.069)
Length = 135
Score = 26.6 bits (56), Expect = 4.0
Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 5/32 (15%)
Frame = -2
Query: 285 APPVTPPGGAEP*AGTSG-----PPQRPGAQA 205
APP + P GA P +G G PP +P AQ+
Sbjct: 89 APPTSQPYGAPPTSGYPGYQQHPPPPQPSAQS 120
>SB_22158| Best HMM Match : Lipoprotein_15 (HMM E-Value=8.4)
Length = 184
Score = 26.6 bits (56), Expect = 4.0
Identities = 14/27 (51%), Positives = 14/27 (51%), Gaps = 2/27 (7%)
Frame = -2
Query: 291 LAAPPVTPPGGAE--P*AGTSGPPQRP 217
L PPVTPP G E P T PP P
Sbjct: 130 LPPPPVTPPPGPETPPPPDTPAPPVPP 156
>SB_34481| Best HMM Match : Extensin_2 (HMM E-Value=0.48)
Length = 341
Score = 26.6 bits (56), Expect = 4.0
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = -2
Query: 288 AAPPVTPPGGAEP*AGTSGPPQRPG 214
A PP PPGGA P PP PG
Sbjct: 303 APPPPPPPGGAPP-PPPPPPPPPPG 326
>SB_28880| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 196
Score = 26.6 bits (56), Expect = 4.0
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = +2
Query: 194 VSRCAWAPGLCGGPDVPAH 250
V RC GL GGP+ PAH
Sbjct: 45 VERCCRFEGLPGGPEDPAH 63
>SB_46160| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1488
Score = 26.2 bits (55), Expect = 5.3
Identities = 19/56 (33%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
Frame = -1
Query: 223 EARRPGTARNTRRPKPTELSACCRERSETP---RHR-NKPSRPVWSRRSPHHFHCS 68
EAR G+ R P + R SE P ++R PS P +S R+P CS
Sbjct: 913 EARWCGSERQPETPVAPAKQSQMRFNSEAPLAPQYRYESPSEPRYSPRTPPETRCS 968
>SB_40971| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 828
Score = 26.2 bits (55), Expect = 5.3
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -2
Query: 243 GTSGPPQRPGAQAQRETLGVRSRQ 172
G GPP RPG Q+ T G R ++
Sbjct: 129 GPRGPPGRPGHPGQKGTRGRRGQR 152
>SB_6936| Best HMM Match : TP2 (HMM E-Value=1.1)
Length = 256
Score = 26.2 bits (55), Expect = 5.3
Identities = 16/63 (25%), Positives = 27/63 (42%)
Frame = -1
Query: 307 GRGSGAXSPAGHPSGRCRAVSRDIRTTTEARRPGTARNTRRPKPTELSACCRERSETPRH 128
G P+ H R R +D + + + + +R KP E R+RS +PR
Sbjct: 151 GESPDRQRPSPHRRSRPRN-RKDRQLDKKTKTLPNSYAPKRDKPRERKKVARDRSRSPRS 209
Query: 127 RNK 119
R++
Sbjct: 210 RSR 212
>SB_44956| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 736
Score = 26.2 bits (55), Expect = 5.3
Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
Frame = +2
Query: 122 IPVTGRL*ALPAASAQ--LCRLRTPSVSRCAWAP 217
IP +GR L +A+ LCR +P ++R AW P
Sbjct: 534 IPTSGRCSDLDTNTAKHVLCRGLSPILTRVAWRP 567
>SB_20512| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 451
Score = 26.2 bits (55), Expect = 5.3
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = -2
Query: 291 LAAPPVTPPGGAEP*AGTSGPPQRPGAQAQRETLGVR 181
L +P GA+ G G RPGA R T+GV+
Sbjct: 238 LCSPGAKGAQGAQGPKGNPGLRGRPGATGPRPTVGVK 274
>SB_7731| Best HMM Match : Extensin_2 (HMM E-Value=1.2)
Length = 352
Score = 26.2 bits (55), Expect = 5.3
Identities = 14/32 (43%), Positives = 15/32 (46%), Gaps = 4/32 (12%)
Frame = -2
Query: 294 GLAAPPVTPPGGAEP*AGTSG----PPQRPGA 211
G+ APP PPG P G PP PGA
Sbjct: 175 GILAPPPAPPGVLAPPPAPPGVLPPPPAPPGA 206
>SB_39808| Best HMM Match : EGF_CA (HMM E-Value=6.3e-35)
Length = 850
Score = 25.8 bits (54), Expect = 7.0
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -1
Query: 127 RNKPSRPVWSRRSPHHFHC 71
+NK V S +SPHH HC
Sbjct: 589 KNKKIVSVPSGKSPHHLHC 607
>SB_39039| Best HMM Match : Drf_FH1 (HMM E-Value=6.4)
Length = 254
Score = 25.8 bits (54), Expect = 7.0
Identities = 15/30 (50%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
Frame = -3
Query: 158 LPGALR--DAPSPE*TFSTCLVSTESTPFP 75
LPGA R AP+P+ T +T L TE P P
Sbjct: 198 LPGASRAAPAPTPQPTAATPLPETEPEPEP 227
>SB_24641| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1120
Score = 25.8 bits (54), Expect = 7.0
Identities = 15/40 (37%), Positives = 18/40 (45%)
Frame = +1
Query: 34 QQLNCSSSISKYYNGNGVDSVETKQVEKVYSGDGASLSAP 153
Q + S K G+G + E KQ EK GDG S P
Sbjct: 553 QPASKSKQSEKGKQGDGQPASEPKQSEKGKQGDGQPASEP 592
Score = 25.4 bits (53), Expect = 9.2
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +1
Query: 76 GNGVDSVETKQVEKVYSGDGASLSAP 153
G+G + E+KQ EK GDG S P
Sbjct: 448 GDGQPASESKQSEKGKQGDGQPASEP 473
Score = 25.4 bits (53), Expect = 9.2
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = +1
Query: 49 SSSISKYYNGNGVDSVETKQVEKVYSGDGASLSAP 153
S K G+G + E KQ EK GDG S P
Sbjct: 456 SKQSEKGKQGDGQPASEPKQSEKGKQGDGQPASEP 490
>SB_17315| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 405
Score = 25.8 bits (54), Expect = 7.0
Identities = 15/45 (33%), Positives = 19/45 (42%), Gaps = 4/45 (8%)
Frame = -2
Query: 303 GVAGLAAPPVTPPG----GAEP*AGTSGPPQRPGAQAQRETLGVR 181
G G+ PP G G G+ GPP PGA Q G++
Sbjct: 22 GPIGMTGPPGLAGGVGANGPSGRGGSQGPPGPPGAPGQPGPRGIK 66
>SB_14911| Best HMM Match : Amelogenin (HMM E-Value=1.7)
Length = 326
Score = 25.8 bits (54), Expect = 7.0
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = -3
Query: 251 REQGHQDHHRGPAPRHSEKHSASEA 177
R+ G++D P PRHS H +++
Sbjct: 212 RDSGNRDRVTDPYPRHSSPHHRAQS 236
>SB_48021| Best HMM Match : Transposase_5 (HMM E-Value=0.16)
Length = 232
Score = 25.4 bits (53), Expect = 9.2
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = -1
Query: 274 HPSGRCRAVSRDIRTTTEARRPGTARNTRR 185
+PS C V+R IR RPG RN R
Sbjct: 35 NPSTACGIVARYIRERRIEERPGGGRNNVR 64
>SB_34906| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 3922
Score = 25.4 bits (53), Expect = 9.2
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +1
Query: 76 GNGVDSVETKQVEKVYSGDGASLSAPGSKRSALS 177
G ++ VET K+ SGD + AP S + +S
Sbjct: 2771 GKCINVVETSSAYKIASGDYGKVPAPASSITLVS 2804
>SB_29610| Best HMM Match : Extensin_2 (HMM E-Value=2.3)
Length = 1353
Score = 25.4 bits (53), Expect = 9.2
Identities = 11/39 (28%), Positives = 20/39 (51%)
Frame = -1
Query: 223 EARRPGTARNTRRPKPTELSACCRERSETPRHRNKPSRP 107
+A RP A RP+ + + R R + + ++K S+P
Sbjct: 601 QAARPRQAARQARPRQSSRKSKARARQASRKSKSKTSKP 639
>SB_28528| Best HMM Match : TUDOR (HMM E-Value=0.34)
Length = 736
Score = 25.4 bits (53), Expect = 9.2
Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Frame = +1
Query: 67 YYNGNGVDSVETKQVEKVYSGDGASLSAPGSKRSAL-SASDAECFSLCL 210
YY G + T+ + YSGD +LS + L S ++ FS+ L
Sbjct: 660 YYPGFIASKLSTRYTVRTYSGDNVNLSIHDTPSVILDKVSISDTFSIIL 708
>SB_23288| Best HMM Match : MMR_HSR1 (HMM E-Value=8.3e-06)
Length = 210
Score = 25.4 bits (53), Expect = 9.2
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = -3
Query: 233 DHHRGPAPRHSEKHSASEADRAERLLPG 150
D GP+ H ++HS +AD+ ++ G
Sbjct: 3 DDESGPSKAHRKRHSGPKADKKKKRSDG 30
>SB_20899| Best HMM Match : RRM_1 (HMM E-Value=2.3e-15)
Length = 876
Score = 25.4 bits (53), Expect = 9.2
Identities = 14/39 (35%), Positives = 15/39 (38%)
Frame = -3
Query: 242 GHQDHHRGPAPRHSEKHSASEADRAERLLPGALRDAPSP 126
G D H GP RH H +RL P RD P
Sbjct: 144 GPPDRH-GPPDRHGMDHGRGRGRGRDRLSPPPHRDRGRP 181
>SB_5192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4865
Score = 25.4 bits (53), Expect = 9.2
Identities = 19/62 (30%), Positives = 22/62 (35%)
Frame = -1
Query: 301 GSGAXSPAGHPSGRCRAVSRDIRTTTEARRPGTARNTRRPKPTELSACCRERSETPRHRN 122
G G SP SR R E RR RP + S R R+ T H+N
Sbjct: 1786 GEGERSPEIRNRASPVMKSRIPRPVAEPRR--RISQPSRPSDDDFSPPVRRRAHTNAHKN 1843
Query: 121 KP 116
P
Sbjct: 1844 NP 1845
>SB_53582| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 393
Score = 25.4 bits (53), Expect = 9.2
Identities = 16/74 (21%), Positives = 30/74 (40%), Gaps = 1/74 (1%)
Frame = -1
Query: 307 GRGSGAXSPAGHPSGRCRAVSRDIRTTTEARRPGTARNTR-RPKPTELSACCRERSETPR 131
GRG + A P R + +T +A RPG + + T + R ++ P
Sbjct: 236 GRGYTTRAKATRPRRRPHDQGKSYKTREKATRPGRRSHEQGEGYTTRVKYTTRAKATRPE 295
Query: 130 HRNKPSRPVWSRRS 89
R + +++ R+
Sbjct: 296 RRQQDQGEIYTTRA 309
>SB_41093| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 586
Score = 25.4 bits (53), Expect = 9.2
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = -3
Query: 224 RGPAPRHSEKHSASEADRAERLLPGALRDAP 132
R P +HS + AD+ + +P A++ AP
Sbjct: 493 RQPMLQHSSGEESENADKENQEVPSAIKPAP 523
>SB_31002| Best HMM Match : RhoGAP (HMM E-Value=0)
Length = 1250
Score = 25.4 bits (53), Expect = 9.2
Identities = 19/72 (26%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Frame = -1
Query: 301 GSGAXSPAGHPSGRCRAVSRDIRTTTEARRPGTARNTRRPKPTELSACCRERSETPRH-R 125
GS + S G GR + + + A+R ++ RP+ L E+ ETP+H +
Sbjct: 1106 GSDSDSRKGLVIGRNLSEQNE-KLDLSAQRREKVESSERPRSLVLEPLRLEKIETPKHEK 1164
Query: 124 NKPSRPVWSRRS 89
+K + + S+ S
Sbjct: 1165 HKTAHSLPSKHS 1176
>SB_30029| Best HMM Match : Extensin_2 (HMM E-Value=0.45)
Length = 622
Score = 25.4 bits (53), Expect = 9.2
Identities = 18/52 (34%), Positives = 24/52 (46%)
Frame = -2
Query: 279 PVTPPGGAEP*AGTSGPPQRPGAQAQRETLGVRSRQS*ALAAGSAQRRPVTG 124
PV PP A P +S PP A++ G + + ALAA S+ P G
Sbjct: 520 PVPPP--AYPTRPSSNPPNTFPAESPLSHSGAAAAAAAALAAASSMTYPGMG 569
>SB_27977| Best HMM Match : ARID (HMM E-Value=1.6e-26)
Length = 1536
Score = 25.4 bits (53), Expect = 9.2
Identities = 18/52 (34%), Positives = 24/52 (46%)
Frame = -2
Query: 279 PVTPPGGAEP*AGTSGPPQRPGAQAQRETLGVRSRQS*ALAAGSAQRRPVTG 124
PV PP A P +S PP A++ G + + ALAA S+ P G
Sbjct: 144 PVPPP--AYPTRPSSNPPNTFPAESPLSHSGAAAAAAAALAAASSMTYPGMG 193
>SB_26487| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 941
Score = 25.4 bits (53), Expect = 9.2
Identities = 11/36 (30%), Positives = 17/36 (47%)
Frame = -1
Query: 187 RPKPTELSACCRERSETPRHRNKPSRPVWSRRSPHH 80
+P+P S R + KP P+ SR++P H
Sbjct: 482 QPRPRSHSQTSRRSRASTSESRKPRDPLGSRQAPGH 517
>SB_23411| Best HMM Match : Glyco_transf_8 (HMM E-Value=8.4e-15)
Length = 582
Score = 25.4 bits (53), Expect = 9.2
Identities = 14/58 (24%), Positives = 27/58 (46%)
Frame = -1
Query: 286 SPAGHPSGRCRAVSRDIRTTTEARRPGTARNTRRPKPTELSACCRERSETPRHRNKPS 113
SPA + R S ++R + +R P + +R P+ + S R+ + R+ P+
Sbjct: 136 SPASRNNLRESPTSCNVRDSPSSRNPRDSPASRNPRDSPSSCNVRDSPSSRNPRDSPA 193
>SB_21662| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 157
Score = 25.4 bits (53), Expect = 9.2
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = -3
Query: 224 RGPAPRHSEKHSASEADRAERLLPGALRDAP 132
R P +HS + AD+ + +P A++ AP
Sbjct: 95 RQPMLQHSSGEESENADKENQEVPSAIKPAP 125
>SB_3882| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 427
Score = 25.4 bits (53), Expect = 9.2
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -1
Query: 190 RRPKPTELSACCRERSETP 134
RRP+ + CCR+R E P
Sbjct: 100 RRPRRSHRMFCCRQREEYP 118
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,681,968
Number of Sequences: 59808
Number of extensions: 238091
Number of successful extensions: 1081
Number of sequences better than 10.0: 67
Number of HSP's better than 10.0 without gapping: 863
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1052
length of database: 16,821,457
effective HSP length: 71
effective length of database: 12,575,089
effective search space used: 377252670
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -