Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt4o08
(307 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024811-5|AAF60775.1| 285|Caenorhabditis elegans Collagen prot... 32 0.069
Z81079-8|CAD56581.2| 1175|Caenorhabditis elegans Hypothetical pr... 32 0.091
Z81079-7|CAD21643.1| 778|Caenorhabditis elegans Hypothetical pr... 32 0.091
Z81079-6|CAD21644.2| 1138|Caenorhabditis elegans Hypothetical pr... 32 0.091
Z81079-1|CAB03084.1| 650|Caenorhabditis elegans Hypothetical pr... 32 0.091
Z80215-18|CAD56563.2| 1175|Caenorhabditis elegans Hypothetical p... 32 0.091
Z80215-17|CAD21700.1| 778|Caenorhabditis elegans Hypothetical p... 32 0.091
Z80215-16|CAD21701.2| 1138|Caenorhabditis elegans Hypothetical p... 32 0.091
AF164959-3|AAD47825.1| 650|Caenorhabditis elegans CLE-1C protei... 32 0.091
AF164959-2|AAD47824.1| 778|Caenorhabditis elegans CLE-1B protei... 32 0.091
AF164959-1|AAD47823.1| 1117|Caenorhabditis elegans CLE-1A protei... 32 0.091
Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical pr... 31 0.16
Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical pr... 31 0.21
Z75547-12|CAN99725.1| 141|Caenorhabditis elegans Hypothetical p... 30 0.28
U80838-2|AAL02517.1| 297|Caenorhabditis elegans Abnormal cell l... 30 0.28
U80838-1|AAU05570.1| 597|Caenorhabditis elegans Abnormal cell l... 30 0.28
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 30 0.28
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 30 0.28
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 30 0.28
Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical pr... 30 0.37
Z68213-3|CAA92438.1| 223|Caenorhabditis elegans Hypothetical pr... 29 0.48
Z49938-3|CAA90188.1| 306|Caenorhabditis elegans Hypothetical pr... 29 0.48
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 29 0.48
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 29 0.48
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 29 0.48
Z82268-5|CAB05195.1| 304|Caenorhabditis elegans Hypothetical pr... 29 0.64
Z81122-3|CAB54313.1| 1076|Caenorhabditis elegans Hypothetical pr... 29 0.64
Z81122-2|CAB03354.1| 1074|Caenorhabditis elegans Hypothetical pr... 29 0.64
Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical pr... 29 0.64
AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical ... 29 0.64
AF067949-1|AAC19236.2| 1446|Caenorhabditis elegans Suppressor of... 29 0.64
Z81138-4|CAB03474.1| 304|Caenorhabditis elegans Hypothetical pr... 29 0.85
Z81138-3|CAB63321.1| 304|Caenorhabditis elegans Hypothetical pr... 29 0.85
Z81138-1|CAB03475.1| 304|Caenorhabditis elegans Hypothetical pr... 29 0.85
AC024805-16|AAK39336.1| 448|Caenorhabditis elegans Hypothetical... 29 0.85
Z77662-15|CAI79240.1| 255|Caenorhabditis elegans Hypothetical p... 28 1.1
Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical pr... 28 1.1
L15419-1|AAA17726.1| 308|Caenorhabditis elegans col-40 collagen... 28 1.1
AL031635-5|CAA21042.1| 1113|Caenorhabditis elegans Hypothetical ... 28 1.1
Z81460-5|CAB03832.1| 952|Caenorhabditis elegans Hypothetical pr... 28 1.5
Z70209-3|CAA94147.1| 952|Caenorhabditis elegans Hypothetical pr... 28 1.5
Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical pr... 28 1.5
AF026211-4|AAB71295.1| 416|Caenorhabditis elegans Collagen prot... 28 1.5
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 27 2.0
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 27 2.0
U55373-5|AAC25888.1| 289|Caenorhabditis elegans Collagen protei... 27 2.0
U55366-4|AAA97982.1| 310|Caenorhabditis elegans Collagen protei... 27 2.0
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 27 2.0
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 27 2.0
AL031632-7|CAA21009.2| 1528|Caenorhabditis elegans Hypothetical ... 27 2.0
AC024847-5|AAN73850.1| 792|Caenorhabditis elegans Ww domain pro... 27 2.0
AC024847-4|AAN73849.1| 794|Caenorhabditis elegans Ww domain pro... 27 2.0
Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical pr... 27 2.6
Z82083-5|CAB04973.1| 298|Caenorhabditis elegans Hypothetical pr... 27 2.6
Z81042-1|CAB02795.1| 1657|Caenorhabditis elegans Hypothetical pr... 27 2.6
Z77132-3|CAB00860.1| 310|Caenorhabditis elegans Hypothetical pr... 27 2.6
Z77132-2|CAB00858.1| 294|Caenorhabditis elegans Hypothetical pr... 27 2.6
Z75541-4|CAA99858.1| 146|Caenorhabditis elegans Hypothetical pr... 27 2.6
Z69787-1|CAA93642.1| 300|Caenorhabditis elegans Hypothetical pr... 27 2.6
Z68335-1|CAA92729.1| 299|Caenorhabditis elegans Hypothetical pr... 27 2.6
Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen... 27 2.6
Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen... 27 2.6
U53344-2|AAP13769.1| 301|Caenorhabditis elegans Collagen protei... 27 2.6
U53344-1|AAA96223.1| 363|Caenorhabditis elegans Collagen protei... 27 2.6
U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein ... 27 2.6
U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein ... 27 2.6
U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protei... 27 2.6
U39644-6|AAO44907.1| 300|Caenorhabditis elegans Collagen protei... 27 2.6
U39644-5|AAO44906.1| 300|Caenorhabditis elegans Collagen protei... 27 2.6
U39644-4|AAA80357.2| 301|Caenorhabditis elegans Collagen protei... 27 2.6
U39644-3|AAA80358.2| 301|Caenorhabditis elegans Collagen protei... 27 2.6
U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV) coll... 27 2.6
Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical pr... 27 3.4
Z81115-4|CAB03294.2| 651|Caenorhabditis elegans Hypothetical pr... 27 3.4
Z78064-1|CAB01509.1| 313|Caenorhabditis elegans Hypothetical pr... 27 3.4
Z77662-14|CAI79239.1| 245|Caenorhabditis elegans Hypothetical p... 27 3.4
Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical pr... 27 3.4
Z70756-6|CAA94792.1| 290|Caenorhabditis elegans Hypothetical pr... 27 3.4
Z70756-4|CAA94788.1| 290|Caenorhabditis elegans Hypothetical pr... 27 3.4
Z68104-5|CAA92114.2| 102|Caenorhabditis elegans Hypothetical pr... 27 3.4
Z54237-5|CAN86900.1| 273|Caenorhabditis elegans Hypothetical pr... 27 3.4
Z54237-4|CAN86899.1| 297|Caenorhabditis elegans Hypothetical pr... 27 3.4
Z27078-7|CAE52901.2| 1502|Caenorhabditis elegans Hypothetical pr... 27 3.4
Z27078-6|CAA81584.4| 1759|Caenorhabditis elegans Hypothetical pr... 27 3.4
X56979-1|CAA40299.1| 1758|Caenorhabditis elegans alpha1(IV) coll... 27 3.4
V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein ( Caeno... 27 3.4
U70849-7|AAF99925.2| 332|Caenorhabditis elegans Collagen protei... 27 3.4
U67953-4|AAL13329.1| 732|Caenorhabditis elegans Hypothetical pr... 27 3.4
U40029-11|AAA81130.1| 914|Caenorhabditis elegans Tudor staphylo... 27 3.4
J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein ( C.ele... 27 3.4
AF303263-1|AAG50221.1| 102|Caenorhabditis elegans XM26 protein. 27 3.4
AF067607-9|AAF98609.1| 460|Caenorhabditis elegans Collagen prot... 27 3.4
AC024775-6|AAK68452.2| 304|Caenorhabditis elegans Collagen prot... 27 3.4
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 26 4.5
U58755-13|AAB00702.1| 348|Caenorhabditis elegans Collagen prote... 26 4.5
AL032627-19|CAD66222.1| 309|Caenorhabditis elegans Hypothetical... 26 4.5
AF016687-1|AAC48094.2| 315|Caenorhabditis elegans Dumpy : short... 26 4.5
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 26 4.5
AF000198-7|AAB53052.1| 418|Caenorhabditis elegans Collagen prot... 26 4.5
AC024090-6|AAF35428.1| 70|Caenorhabditis elegans Hypothetical ... 26 4.5
Z95621-2|CAB09131.1| 330|Caenorhabditis elegans Hypothetical pr... 26 6.0
Z92773-2|CAB07132.1| 160|Caenorhabditis elegans Hypothetical pr... 26 6.0
Z81118-1|CAB03329.1| 478|Caenorhabditis elegans Hypothetical pr... 26 6.0
Z79696-1|CAB01972.1| 1584|Caenorhabditis elegans Hypothetical pr... 26 6.0
Z78415-7|CAH60759.1| 844|Caenorhabditis elegans Hypothetical pr... 26 6.0
Z78415-5|CAB01670.1| 925|Caenorhabditis elegans Hypothetical pr... 26 6.0
Z78065-1|CAD54154.1| 547|Caenorhabditis elegans Hypothetical pr... 26 6.0
Z78019-9|CAB01457.1| 330|Caenorhabditis elegans Hypothetical pr... 26 6.0
Z75549-4|CAA99919.2| 304|Caenorhabditis elegans Hypothetical pr... 26 6.0
Z68315-7|CAA92672.1| 735|Caenorhabditis elegans Hypothetical pr... 26 6.0
Z54238-5|CAA90997.1| 299|Caenorhabditis elegans Hypothetical pr... 26 6.0
Z54238-3|CAA90995.1| 299|Caenorhabditis elegans Hypothetical pr... 26 6.0
Z22178-2|CAA80154.1| 261|Caenorhabditis elegans Hypothetical pr... 26 6.0
U80451-9|AAB37843.1| 285|Caenorhabditis elegans Collagen protei... 26 6.0
U64609-7|AAB04604.3| 373|Caenorhabditis elegans Sperm-specific ... 26 6.0
U41015-4|AAA82313.1| 317|Caenorhabditis elegans Hypothetical pr... 26 6.0
U40802-12|AAK19014.2| 265|Caenorhabditis elegans Sperm-specific... 26 6.0
U39644-7|AAO44908.1| 307|Caenorhabditis elegans Collagen protei... 26 6.0
U29377-3|AAA68720.2| 472|Caenorhabditis elegans Hypothetical pr... 26 6.0
U23830-1|AAB01508.1| 730|Caenorhabditis elegans suf-1 protein. 26 6.0
M25477-1|AAA27991.1| 329|Caenorhabditis elegans collagen protein. 26 6.0
L39893-1|AAA62311.1| 735|Caenorhabditis elegans cleavage stimul... 26 6.0
AY347576-1|AAP97870.1| 299|Caenorhabditis elegans COLlagen stru... 26 6.0
AY347574-1|AAP97868.1| 299|Caenorhabditis elegans COLlagen stru... 26 6.0
AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical... 26 6.0
AL110500-7|CAB54490.1| 489|Caenorhabditis elegans Hypothetical ... 26 6.0
AL032627-21|CAD66221.1| 289|Caenorhabditis elegans Hypothetical... 26 6.0
AJ000537-1|CAA04170.1| 478|Caenorhabditis elegans GluClalpha2B ... 26 6.0
AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA topoisome... 26 6.0
AF003148-4|AAR25646.1| 301|Caenorhabditis elegans Hypothetical ... 26 6.0
AF003148-1|AAR25644.1| 432|Caenorhabditis elegans Hypothetical ... 26 6.0
AC084154-10|AAK29873.1| 1140|Caenorhabditis elegans Hypothetical... 26 6.0
Z81503-1|CAB04111.1| 305|Caenorhabditis elegans Hypothetical pr... 25 7.9
Z74042-8|CAA98525.1| 299|Caenorhabditis elegans Hypothetical pr... 25 7.9
Z74036-2|CAA98487.1| 266|Caenorhabditis elegans Hypothetical pr... 25 7.9
Z74036-1|CAA98486.1| 299|Caenorhabditis elegans Hypothetical pr... 25 7.9
Z70682-4|CAA94581.1| 299|Caenorhabditis elegans Hypothetical pr... 25 7.9
Z68507-1|CAA92826.1| 337|Caenorhabditis elegans Hypothetical pr... 25 7.9
Z68221-5|CAJ30235.1| 416|Caenorhabditis elegans Hypothetical pr... 25 7.9
Z68221-4|CAJ30234.1| 488|Caenorhabditis elegans Hypothetical pr... 25 7.9
Z66563-2|CAA91469.3| 2557|Caenorhabditis elegans Hypothetical pr... 25 7.9
Z49131-6|CAA88979.1| 297|Caenorhabditis elegans Hypothetical pr... 25 7.9
X57834-1|CAA40967.1| 416|Caenorhabditis elegans elt-1 protein. 25 7.9
U80451-8|AAB37842.2| 288|Caenorhabditis elegans Collagen protei... 25 7.9
U61948-2|AAB03143.2| 345|Caenorhabditis elegans Collagen protei... 25 7.9
U39850-2|AAA81056.1| 451|Caenorhabditis elegans Hypothetical pr... 25 7.9
M25480-1|AAA27986.1| 326|Caenorhabditis elegans collagen protein. 25 7.9
DQ641631-1|ABG29106.1| 451|Caenorhabditis elegans sex determini... 25 7.9
AL132898-12|CAB60942.1| 173|Caenorhabditis elegans Hypothetical... 25 7.9
AF047661-4|AAC04435.2| 931|Caenorhabditis elegans Hypothetical ... 25 7.9
AF040642-7|AAB94952.1| 329|Caenorhabditis elegans Collagen prot... 25 7.9
AF022985-12|AAB69959.1| 319|Caenorhabditis elegans Collagen pro... 25 7.9
AF002196-3|AAP68957.1| 916|Caenorhabditis elegans Hypothetical ... 25 7.9
AF002196-1|AAP68955.1| 913|Caenorhabditis elegans Hypothetical ... 25 7.9
AC084153-16|AAK84590.1| 233|Caenorhabditis elegans Hypothetical... 25 7.9
AC025721-11|AAK29900.1| 78|Caenorhabditis elegans Hypothetical... 25 7.9
AC024744-1|AAL00859.1| 685|Caenorhabditis elegans Hypothetical ... 25 7.9
>AC024811-5|AAF60775.1| 285|Caenorhabditis elegans Collagen protein
48 protein.
Length = 285
Score = 32.3 bits (70), Expect = 0.069
Identities = 19/38 (50%), Positives = 19/38 (50%), Gaps = 4/38 (10%)
Frame = -2
Query: 303 GVAGLAAPPVTP----PGGAEP*AGTSGPPQRPGAQAQ 202
G G PP P PGG P G SGPP RPGA Q
Sbjct: 188 GQPGQRGPPGEPGALLPGGDAP-PGPSGPPGRPGAPGQ 224
Score = 25.4 bits (53), Expect = 7.9
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = -2
Query: 303 GVAGLAAPPVTPPGGAEP*AGTSGPPQRPGA 211
G G + PP P +P G GPP PGA
Sbjct: 173 GPQGPSGPPGPPGQPGQP--GQRGPPGEPGA 201
>Z81079-8|CAD56581.2| 1175|Caenorhabditis elegans Hypothetical
protein C36B1.1d protein.
Length = 1175
Score = 31.9 bits (69), Expect = 0.091
Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
Frame = -2
Query: 303 GVAGLAAPPVTPPGGAEP*AGTSGP---PQRPGAQAQRETLGVRSRQ 172
G+ GLA PP P G +G GP P PGA + T GV ++
Sbjct: 755 GMPGLAGPPGPPGSGTGHGSGADGPQGPPGLPGAPGRDGTSGVEGQR 801
>Z81079-7|CAD21643.1| 778|Caenorhabditis elegans Hypothetical
protein C36B1.1b protein.
Length = 778
Score = 31.9 bits (69), Expect = 0.091
Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
Frame = -2
Query: 303 GVAGLAAPPVTPPGGAEP*AGTSGP---PQRPGAQAQRETLGVRSRQ 172
G+ GLA PP P G +G GP P PGA + T GV ++
Sbjct: 358 GMPGLAGPPGPPGSGTGHGSGADGPQGPPGLPGAPGRDGTSGVEGQR 404
>Z81079-6|CAD21644.2| 1138|Caenorhabditis elegans Hypothetical
protein C36B1.1a protein.
Length = 1138
Score = 31.9 bits (69), Expect = 0.091
Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
Frame = -2
Query: 303 GVAGLAAPPVTPPGGAEP*AGTSGP---PQRPGAQAQRETLGVRSRQ 172
G+ GLA PP P G +G GP P PGA + T GV ++
Sbjct: 718 GMPGLAGPPGPPGSGTGHGSGADGPQGPPGLPGAPGRDGTSGVEGQR 764
>Z81079-1|CAB03084.1| 650|Caenorhabditis elegans Hypothetical
protein C36B1.1c protein.
Length = 650
Score = 31.9 bits (69), Expect = 0.091
Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
Frame = -2
Query: 303 GVAGLAAPPVTPPGGAEP*AGTSGP---PQRPGAQAQRETLGVRSRQ 172
G+ GLA PP P G +G GP P PGA + T GV ++
Sbjct: 230 GMPGLAGPPGPPGSGTGHGSGADGPQGPPGLPGAPGRDGTSGVEGQR 276
>Z80215-18|CAD56563.2| 1175|Caenorhabditis elegans Hypothetical
protein C36B1.1d protein.
Length = 1175
Score = 31.9 bits (69), Expect = 0.091
Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
Frame = -2
Query: 303 GVAGLAAPPVTPPGGAEP*AGTSGP---PQRPGAQAQRETLGVRSRQ 172
G+ GLA PP P G +G GP P PGA + T GV ++
Sbjct: 755 GMPGLAGPPGPPGSGTGHGSGADGPQGPPGLPGAPGRDGTSGVEGQR 801
>Z80215-17|CAD21700.1| 778|Caenorhabditis elegans Hypothetical
protein C36B1.1b protein.
Length = 778
Score = 31.9 bits (69), Expect = 0.091
Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
Frame = -2
Query: 303 GVAGLAAPPVTPPGGAEP*AGTSGP---PQRPGAQAQRETLGVRSRQ 172
G+ GLA PP P G +G GP P PGA + T GV ++
Sbjct: 358 GMPGLAGPPGPPGSGTGHGSGADGPQGPPGLPGAPGRDGTSGVEGQR 404
>Z80215-16|CAD21701.2| 1138|Caenorhabditis elegans Hypothetical
protein C36B1.1a protein.
Length = 1138
Score = 31.9 bits (69), Expect = 0.091
Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
Frame = -2
Query: 303 GVAGLAAPPVTPPGGAEP*AGTSGP---PQRPGAQAQRETLGVRSRQ 172
G+ GLA PP P G +G GP P PGA + T GV ++
Sbjct: 718 GMPGLAGPPGPPGSGTGHGSGADGPQGPPGLPGAPGRDGTSGVEGQR 764
>AF164959-3|AAD47825.1| 650|Caenorhabditis elegans CLE-1C protein
protein.
Length = 650
Score = 31.9 bits (69), Expect = 0.091
Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
Frame = -2
Query: 303 GVAGLAAPPVTPPGGAEP*AGTSGP---PQRPGAQAQRETLGVRSRQ 172
G+ GLA PP P G +G GP P PGA + T GV ++
Sbjct: 230 GMPGLAGPPGPPGSGTGHGSGADGPQGPPGLPGAPGRDGTSGVEGQR 276
>AF164959-2|AAD47824.1| 778|Caenorhabditis elegans CLE-1B protein
protein.
Length = 778
Score = 31.9 bits (69), Expect = 0.091
Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
Frame = -2
Query: 303 GVAGLAAPPVTPPGGAEP*AGTSGP---PQRPGAQAQRETLGVRSRQ 172
G+ GLA PP P G +G GP P PGA + T GV ++
Sbjct: 358 GMPGLAGPPGPPGSGTGHGSGADGPQGPPGLPGAPGRDGTSGVEGQR 404
>AF164959-1|AAD47823.1| 1117|Caenorhabditis elegans CLE-1A protein
protein.
Length = 1117
Score = 31.9 bits (69), Expect = 0.091
Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
Frame = -2
Query: 303 GVAGLAAPPVTPPGGAEP*AGTSGP---PQRPGAQAQRETLGVRSRQ 172
G+ GLA PP P G +G GP P PGA + T GV ++
Sbjct: 697 GMPGLAGPPGPPGSGTGHGSGADGPQGPPGLPGAPGRDGTSGVEGQR 743
>Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical
protein F54B11.2 protein.
Length = 304
Score = 31.1 bits (67), Expect = 0.16
Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +2
Query: 173 CRLRTPSVSR-CAWAPGLCGGPDVPAHGSAPPGGVTGGAASPATP 304
C +TP + C P GPD PA G A P G G A+P+ P
Sbjct: 143 CEAKTPPPCKPCPAGPPGPPGPDGPA-GPAGPDGEAGSPAAPSPP 186
Score = 27.9 bits (59), Expect = 1.5
Identities = 17/33 (51%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
Frame = -2
Query: 306 AGVAGLAAPPVTPPGGAEP*A--GTSGPPQRPG 214
AG G A PP P GA P A G +GPP PG
Sbjct: 227 AGPPGPAGPP--GPDGASPTAAPGAAGPPGPPG 257
Score = 26.2 bits (55), Expect = 4.5
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 4/36 (11%)
Frame = -2
Query: 294 GLAAPPVTP-PGGA---EP*AGTSGPPQRPGAQAQR 199
G A PP P P GA + GT+GPP + G + ++
Sbjct: 248 GAAGPPGPPGPAGAPGPDGNPGTAGPPGKAGGEGEK 283
>Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical
protein H06A10.2 protein.
Length = 305
Score = 30.7 bits (66), Expect = 0.21
Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +2
Query: 173 CRLRTPSVSR-CAWAPGLCGGPDVPAHGSAPPGGVTGGAASPATP 304
C +TP + C P GPD PA G A P G G A+P+ P
Sbjct: 144 CEAKTPPPCQPCPAGPPGPPGPDGPA-GPAGPDGEAGSPAAPSPP 187
Score = 27.9 bits (59), Expect = 1.5
Identities = 17/33 (51%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
Frame = -2
Query: 306 AGVAGLAAPPVTPPGGAEP*A--GTSGPPQRPG 214
AG G A PP P GA P A G +GPP PG
Sbjct: 228 AGPPGPAGPP--GPDGASPTAAPGAAGPPGPPG 258
Score = 26.2 bits (55), Expect = 4.5
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 4/36 (11%)
Frame = -2
Query: 294 GLAAPPVTP-PGGA---EP*AGTSGPPQRPGAQAQR 199
G A PP P P GA + GT+GPP + G + ++
Sbjct: 249 GAAGPPGPPGPAGAPGPDGNPGTAGPPGKAGGEGEK 284
>Z75547-12|CAN99725.1| 141|Caenorhabditis elegans Hypothetical
protein K10C8.3b protein.
Length = 141
Score = 30.3 bits (65), Expect = 0.28
Identities = 14/59 (23%), Positives = 26/59 (44%)
Frame = -1
Query: 256 RAVSRDIRTTTEARRPGTARNTRRPKPTELSACCRERSETPRHRNKPSRPVWSRRSPHH 80
R S+ ++ + +RP + R ++ P P R RS + + K + V P+H
Sbjct: 17 RKKSKSVKRCSSCKRPNSTRRSKTPDPNSEKEKVRNRSGSSSKKEKKNSLVNPNLQPNH 75
>U80838-2|AAL02517.1| 297|Caenorhabditis elegans Abnormal cell
lineage protein 42,isoform a protein.
Length = 297
Score = 30.3 bits (65), Expect = 0.28
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = -2
Query: 300 VAGLAAPPVTPPGGAEP*AGTSGPPQRPGAQAQRETLGVRSRQS 169
+ GL T GGA P +GT+ PP P + L +R Q+
Sbjct: 254 IDGLLPRGATSTGGASPTSGTNSPPVFPKTSSSSSLLMLRDSQN 297
>U80838-1|AAU05570.1| 597|Caenorhabditis elegans Abnormal cell
lineage protein 42,isoform b protein.
Length = 597
Score = 30.3 bits (65), Expect = 0.28
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = -2
Query: 300 VAGLAAPPVTPPGGAEP*AGTSGPPQRPGAQAQRETLGVRSRQS 169
+ GL T GGA P +GT+ PP P + L +R Q+
Sbjct: 554 IDGLLPRGATSTGGASPTSGTNSPPVFPKTSSSSSLLMLRDSQN 597
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 30.3 bits (65), Expect = 0.28
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = -2
Query: 282 PPVTPPGGAEP*AGTSGPPQRPGA 211
PP PP G+ P AG+ PP P A
Sbjct: 238 PPPPPPKGSPPLAGSGSPPPPPAA 261
Score = 26.6 bits (56), Expect = 3.4
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = -2
Query: 300 VAGLAAPPVTPPGGAEP*AGTSGPPQRP 217
+AG +PP P G+ P T PP P
Sbjct: 249 LAGSGSPPPPPAAGSPPPPRTGSPPPPP 276
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 30.3 bits (65), Expect = 0.28
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = -2
Query: 282 PPVTPPGGAEP*AGTSGPPQRPGA 211
PP PP G+ P AG+ PP P A
Sbjct: 259 PPPPPPKGSPPLAGSGSPPPPPAA 282
Score = 26.6 bits (56), Expect = 3.4
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = -2
Query: 300 VAGLAAPPVTPPGGAEP*AGTSGPPQRP 217
+AG +PP P G+ P T PP P
Sbjct: 270 LAGSGSPPPPPAAGSPPPPRTGSPPPPP 297
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 30.3 bits (65), Expect = 0.28
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = -2
Query: 282 PPVTPPGGAEP*AGTSGPPQRPGA 211
PP PP G+ P AG+ PP P A
Sbjct: 244 PPPPPPKGSPPLAGSGSPPPPPAA 267
Score = 26.6 bits (56), Expect = 3.4
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = -2
Query: 300 VAGLAAPPVTPPGGAEP*AGTSGPPQRP 217
+AG +PP P G+ P T PP P
Sbjct: 255 LAGSGSPPPPPAAGSPPPPRTGSPPPPP 282
>Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical
protein T21B4.2 protein.
Length = 312
Score = 29.9 bits (64), Expect = 0.37
Identities = 15/31 (48%), Positives = 15/31 (48%)
Frame = -2
Query: 294 GLAAPPVTPPGGAEP*AGTSGPPQRPGAQAQ 202
G AP TP GGA G GPP PG Q
Sbjct: 188 GPGAPGNTPSGGAAGPPGPPGPPGGPGNDGQ 218
Score = 27.1 bits (57), Expect = 2.6
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = -2
Query: 270 PPGGAEP*AGTSGPPQRPG 214
PPG A P AG +GPP PG
Sbjct: 170 PPGPAGP-AGNAGPPGAPG 187
Score = 26.2 bits (55), Expect = 4.5
Identities = 16/32 (50%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Frame = -2
Query: 306 AGVAGLAAP-PVTPPGGAEP*AGTSGPPQRPG 214
AG AG A P P PPG A P G P PG
Sbjct: 256 AGQAGYAQPGPAGPPGDAGP----DGAPGNPG 283
>Z68213-3|CAA92438.1| 223|Caenorhabditis elegans Hypothetical
protein C01F6.5 protein.
Length = 223
Score = 29.5 bits (63), Expect = 0.48
Identities = 11/22 (50%), Positives = 18/22 (81%)
Frame = -2
Query: 243 GTSGPPQRPGAQAQRETLGVRS 178
GT+GP +RP AQ +R++ G+R+
Sbjct: 38 GTAGPSRRPTAQPRRQSGGIRT 59
>Z49938-3|CAA90188.1| 306|Caenorhabditis elegans Hypothetical
protein F38A3.2 protein.
Length = 306
Score = 29.5 bits (63), Expect = 0.48
Identities = 17/36 (47%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = -2
Query: 297 AGLAAPPVTPPG--GAEP*AGTSGPPQRPGAQAQRE 196
AG + PP PPG G++ G SGP +PGA A E
Sbjct: 116 AGASGPP-GPPGTDGSDGKDGLSGPDGQPGADADPE 150
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 29.5 bits (63), Expect = 0.48
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -2
Query: 282 PPVTPPGGAEP*AGTSGPPQRPG 214
PP PPGG P G PP PG
Sbjct: 727 PPPPPPGGLPPITGGPPPPPPPG 749
Score = 27.5 bits (58), Expect = 2.0
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = -2
Query: 282 PPVTPPGGAEP*AGTSGPPQRP 217
PP PPGG P +G PP P
Sbjct: 743 PPPPPPGGLPPISGGPPPPPPP 764
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 29.5 bits (63), Expect = 0.48
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -2
Query: 282 PPVTPPGGAEP*AGTSGPPQRPG 214
PP PPGG P G PP PG
Sbjct: 727 PPPPPPGGLPPITGGPPPPPPPG 749
Score = 27.5 bits (58), Expect = 2.0
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = -2
Query: 282 PPVTPPGGAEP*AGTSGPPQRP 217
PP PPGG P +G PP P
Sbjct: 743 PPPPPPGGLPPISGGPPPPPPP 764
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 29.5 bits (63), Expect = 0.48
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -2
Query: 282 PPVTPPGGAEP*AGTSGPPQRPG 214
PP PPGG P G PP PG
Sbjct: 310 PPPPPPGGLPPITGGPPPPPPPG 332
Score = 27.5 bits (58), Expect = 2.0
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = -2
Query: 282 PPVTPPGGAEP*AGTSGPPQRP 217
PP PPGG P +G PP P
Sbjct: 326 PPPPPPGGLPPISGGPPPPPPP 347
>Z82268-5|CAB05195.1| 304|Caenorhabditis elegans Hypothetical
protein F52B11.4 protein.
Length = 304
Score = 29.1 bits (62), Expect = 0.64
Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Frame = -2
Query: 297 AGLAAP-PVTPPG--GAEP*AGTSGPPQRPGAQAQRETL 190
+G AP P P G GA G +G P +PGA AQ E++
Sbjct: 180 SGAGAPGPAGPKGASGAPGNPGQAGAPGQPGADAQSESI 218
Score = 27.5 bits (58), Expect = 2.0
Identities = 17/52 (32%), Positives = 22/52 (42%)
Frame = -2
Query: 279 PVTPPGGAEP*AGTSGPPQRPGAQAQRETLGVRSRQS*ALAAGSAQRRPVTG 124
P+TPP G +G P PG Q G + S A A G A + +G
Sbjct: 144 PITPPPCKPCPQGPAGAPGAPGPQGDAGAPGAPGQGSGAGAPGPAGPKGASG 195
Score = 25.4 bits (53), Expect = 7.9
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = -2
Query: 267 PGGAEP*AGTSGPPQRPG 214
PG A P AGT G P RPG
Sbjct: 107 PGAAGP-AGTPGKPGRPG 123
>Z81122-3|CAB54313.1| 1076|Caenorhabditis elegans Hypothetical
protein T13F2.3b protein.
Length = 1076
Score = 29.1 bits (62), Expect = 0.64
Identities = 13/23 (56%), Positives = 13/23 (56%)
Frame = -2
Query: 285 APPVTPPGGAEP*AGTSGPPQRP 217
A P T PG A P G G PQRP
Sbjct: 289 AAPRTTPGSAGPGTGPPGTPQRP 311
>Z81122-2|CAB03354.1| 1074|Caenorhabditis elegans Hypothetical
protein T13F2.3a protein.
Length = 1074
Score = 29.1 bits (62), Expect = 0.64
Identities = 13/23 (56%), Positives = 13/23 (56%)
Frame = -2
Query: 285 APPVTPPGGAEP*AGTSGPPQRP 217
A P T PG A P G G PQRP
Sbjct: 287 AAPRTTPGSAGPGTGPPGTPQRP 309
>Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical
protein T05A1.2 protein.
Length = 300
Score = 29.1 bits (62), Expect = 0.64
Identities = 14/43 (32%), Positives = 18/43 (41%)
Frame = -2
Query: 303 GVAGLAAPPVTPPGGAEP*AGTSGPPQRPGAQAQRETLGVRSR 175
G G PP P EP G G P R G + R G++ +
Sbjct: 197 GKPGSQGPPGPPGHSDEPKPGQPGQPGRAGPRGPRGVAGIKGK 239
>AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical
protein C24F3.6 protein.
Length = 291
Score = 29.1 bits (62), Expect = 0.64
Identities = 15/39 (38%), Positives = 16/39 (41%)
Frame = -2
Query: 303 GVAGLAAPPVTPPGGAEP*AGTSGPPQRPGAQAQRETLG 187
G G A PP EP G G P +PG QR G
Sbjct: 188 GKPGPAGPPGENGNNGEPQPGAPGEPGQPGQPGQRGPAG 226
>AF067949-1|AAC19236.2| 1446|Caenorhabditis elegans Suppressor of
constitutive dauerformation protein 2 protein.
Length = 1446
Score = 29.1 bits (62), Expect = 0.64
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = -1
Query: 301 GSGAXSPAGHPSGRCRAVSRDIRTTTE-ARRPGTARNTRRPKPTELSACCRERSETP 134
GSGA AG+P G+ RA S + + ++ P ++ R + A CR+R E P
Sbjct: 796 GSGAGYQAGNPFGKSRARSGSSNVSIDFSKSPIYYQSERLDEGYIKIAFCRKRCEPP 852
>Z81138-4|CAB03474.1| 304|Caenorhabditis elegans Hypothetical
protein W05B2.6 protein.
Length = 304
Score = 28.7 bits (61), Expect = 0.85
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = -2
Query: 306 AGVAGLAAPPVTPPGGAEP*AGTSGPPQRPGAQAQRET 193
AG G A P P P G +G P +PG+ AQ E+
Sbjct: 182 AGAPGPAGPKGAPGAPGNP--GQAGAPGQPGSDAQSES 217
Score = 26.2 bits (55), Expect = 4.5
Identities = 17/52 (32%), Positives = 21/52 (40%)
Frame = -2
Query: 279 PVTPPGGAEP*AGTSGPPQRPGAQAQRETLGVRSRQS*ALAAGSAQRRPVTG 124
P+TPP G +G P PG Q G + S A A G A + G
Sbjct: 144 PITPPPCKPCPQGPAGAPGAPGPQGDAGAPGQAGQGSGAGAPGPAGPKGAPG 195
Score = 25.4 bits (53), Expect = 7.9
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = -2
Query: 267 PGGAEP*AGTSGPPQRPG 214
PG A P AGT G P RPG
Sbjct: 107 PGAAGP-AGTPGKPGRPG 123
>Z81138-3|CAB63321.1| 304|Caenorhabditis elegans Hypothetical
protein W05B2.5 protein.
Length = 304
Score = 28.7 bits (61), Expect = 0.85
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = -2
Query: 306 AGVAGLAAPPVTPPGGAEP*AGTSGPPQRPGAQAQRET 193
AG G A P P P G +G P +PG+ AQ E+
Sbjct: 182 AGAPGPAGPKGAPGAPGNP--GQAGAPGQPGSDAQSES 217
Score = 26.2 bits (55), Expect = 4.5
Identities = 17/52 (32%), Positives = 21/52 (40%)
Frame = -2
Query: 279 PVTPPGGAEP*AGTSGPPQRPGAQAQRETLGVRSRQS*ALAAGSAQRRPVTG 124
P+TPP G +G P PG Q G + S A A G A + G
Sbjct: 144 PITPPPCKPCPQGPAGAPGAPGPQGDAGAPGQAGQGSGAGAPGPAGPKGAPG 195
Score = 25.4 bits (53), Expect = 7.9
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = -2
Query: 267 PGGAEP*AGTSGPPQRPG 214
PG A P AGT G P RPG
Sbjct: 107 PGAAGP-AGTPGKPGRPG 123
>Z81138-1|CAB03475.1| 304|Caenorhabditis elegans Hypothetical
protein W05B2.1 protein.
Length = 304
Score = 28.7 bits (61), Expect = 0.85
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = -2
Query: 306 AGVAGLAAPPVTPPGGAEP*AGTSGPPQRPGAQAQRET 193
AG G A P P P G +G P +PG+ AQ E+
Sbjct: 182 AGAPGPAGPKGAPGAPGNP--GQAGAPGQPGSDAQSES 217
Score = 26.2 bits (55), Expect = 4.5
Identities = 17/52 (32%), Positives = 21/52 (40%)
Frame = -2
Query: 279 PVTPPGGAEP*AGTSGPPQRPGAQAQRETLGVRSRQS*ALAAGSAQRRPVTG 124
P+TPP G +G P PG Q G + S A A G A + G
Sbjct: 144 PITPPPCKPCPQGPAGAPGAPGPQGDAGAPGQAGQGSGAGAPGPAGPKGAPG 195
Score = 25.4 bits (53), Expect = 7.9
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = -2
Query: 267 PGGAEP*AGTSGPPQRPG 214
PG A P AGT G P RPG
Sbjct: 107 PGAAGP-AGTPGKPGRPG 123
>AC024805-16|AAK39336.1| 448|Caenorhabditis elegans Hypothetical
protein Y51H7C.1 protein.
Length = 448
Score = 28.7 bits (61), Expect = 0.85
Identities = 14/36 (38%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Frame = +2
Query: 200 RCAWAPGLCGGPDVPAHGSAPPG-GVTGGAASPATP 304
R + PG GGP P P G G GG +P P
Sbjct: 28 RYSGGPGTPGGPGTPGGPGTPGGPGTPGGLGTPGGP 63
Score = 27.5 bits (58), Expect = 2.0
Identities = 15/40 (37%), Positives = 16/40 (40%), Gaps = 1/40 (2%)
Frame = +2
Query: 185 TPSVSRCAWAPGLCGGPDVPAHGSAPPG-GVTGGAASPAT 301
TP PG GGP P P G G GG +P T
Sbjct: 35 TPGGPGTPGGPGTPGGPGTPGGLGTPGGPGTPGGPGTPET 74
>Z77662-15|CAI79240.1| 255|Caenorhabditis elegans Hypothetical
protein F47B8.14 protein.
Length = 255
Score = 28.3 bits (60), Expect = 1.1
Identities = 26/75 (34%), Positives = 34/75 (45%), Gaps = 7/75 (9%)
Frame = +2
Query: 95 SRPNRSRRFIPVTGRL*ALPAASAQLCRLRTPSVS-RCAWAPGLCGGPDVPAHGSAPP-- 265
S P++ RR A PAA A+ + P + A AP P VPA +AP
Sbjct: 164 SYPSKKRRVARDYAEEGAAPAAPAEPAPVPAPEPAPEAAPAPAPEAAP-VPAQDAAPAAP 222
Query: 266 ----GGVTGGAASPA 298
GG + GAA+PA
Sbjct: 223 AADAGGYSAGAAAPA 237
>Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical
protein C53B4.5 protein.
Length = 289
Score = 28.3 bits (60), Expect = 1.1
Identities = 15/39 (38%), Positives = 16/39 (41%)
Frame = -2
Query: 303 GVAGLAAPPVTPPGGAEP*AGTSGPPQRPGAQAQRETLG 187
G G A PP EP G+ G P RPG R G
Sbjct: 186 GKPGPAGPPGENGRNGEPQPGSPGEPGRPGQPGSRGPAG 224
>L15419-1|AAA17726.1| 308|Caenorhabditis elegans col-40 collagen
protein.
Length = 308
Score = 28.3 bits (60), Expect = 1.1
Identities = 18/40 (45%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Frame = -2
Query: 303 GVAGLAAPPVTPPGGAEP*AGTSGPPQRPGAQAQ-RETLG 187
G G A PP P P GT G P PGA Q ET G
Sbjct: 195 GGVGEAGPPGPPGTSGNP--GTDGAPGNPGAPGQVTETPG 232
>AL031635-5|CAA21042.1| 1113|Caenorhabditis elegans Hypothetical
protein Y47D3B.7 protein.
Length = 1113
Score = 28.3 bits (60), Expect = 1.1
Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = -3
Query: 239 HQDHHRGPAPRHSEKHSASEA-DRAERLLPGALRDAPSPE*TFSTCLVSTESTPFP 75
+ HH+ P P H H + + E++ ++ DAP T T LV +S P
Sbjct: 220 YSQHHQSPPPHHHHHHPMPKIHENPEQVASPSIEDAPE---TKPTHLVEPQSPKSP 272
>Z81460-5|CAB03832.1| 952|Caenorhabditis elegans Hypothetical protein
C04A11.4 protein.
Length = 952
Score = 27.9 bits (59), Expect = 1.5
Identities = 15/36 (41%), Positives = 17/36 (47%)
Frame = -2
Query: 285 APPVTPPGGAEP*AGTSGPPQRPGAQAQRETLGVRS 178
APP PP A+P T P A A E + VRS
Sbjct: 906 APPPPPPAHAKPTLPTKQPKVSEDAAATEEKVDVRS 941
>Z70209-3|CAA94147.1| 952|Caenorhabditis elegans Hypothetical protein
C04A11.4 protein.
Length = 952
Score = 27.9 bits (59), Expect = 1.5
Identities = 15/36 (41%), Positives = 17/36 (47%)
Frame = -2
Query: 285 APPVTPPGGAEP*AGTSGPPQRPGAQAQRETLGVRS 178
APP PP A+P T P A A E + VRS
Sbjct: 906 APPPPPPAHAKPTLPTKQPKVSEDAAATEEKVDVRS 941
>Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical
protein F02D10.1 protein.
Length = 316
Score = 27.9 bits (59), Expect = 1.5
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Frame = -2
Query: 306 AGVAGLAAPPVTPPG--GAEP*AGTSGPPQRPGAQAQR 199
AG G PP P G G++ GT+GPP PG + ++
Sbjct: 258 AGGPGPKGPP-GPAGQPGSDGNPGTAGPPGNPGGEGEK 294
Score = 27.5 bits (58), Expect = 2.0
Identities = 15/33 (45%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Frame = -2
Query: 297 AGLAAP-PVTPPGGAEP*AGTSGPPQRPGAQAQ 202
AG + P P PPG A P G G P +PG Q
Sbjct: 192 AGPSGPGPAGPPGPAGP-PGNDGQPGQPGGPGQ 223
>AF026211-4|AAB71295.1| 416|Caenorhabditis elegans Collagen protein
40 protein.
Length = 416
Score = 27.9 bits (59), Expect = 1.5
Identities = 20/54 (37%), Positives = 22/54 (40%), Gaps = 1/54 (1%)
Frame = +2
Query: 146 ALPAASAQLCRLRTPSVSRCAWAPGLCGGP-DVPAHGSAPPGGVTGGAASPATP 304
A P AS C P + A PG G P A G+ P GG G A P P
Sbjct: 164 AAPTAS-DFCFDCPPGPAGPAGGPGPAGPPGPAGADGNTPSGGGEGPAGPPGPP 216
Score = 27.9 bits (59), Expect = 1.5
Identities = 18/40 (45%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Frame = -2
Query: 303 GVAGLAAPPVTPPGGAEP*AGTSGPPQRPGAQAQ-RETLG 187
G G A PP P P GT G P PGA Q ET G
Sbjct: 205 GGEGPAGPPGPPGPAGNP--GTDGAPGNPGAPGQVTETPG 242
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical
protein W01B6.7 protein.
Length = 301
Score = 27.5 bits (58), Expect = 2.0
Identities = 13/24 (54%), Positives = 14/24 (58%), Gaps = 1/24 (4%)
Frame = -2
Query: 282 PPVTP-PGGAEP*AGTSGPPQRPG 214
PP P PGG AG +GPP PG
Sbjct: 145 PPCQPCPGGPPGPAGPAGPPGPPG 168
Score = 27.5 bits (58), Expect = 2.0
Identities = 15/33 (45%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Frame = -2
Query: 297 AGLAAP-PVTPPGGAEP*AGTSGPPQRPGAQAQ 202
AG + P P PPG A P AG G P PG +
Sbjct: 177 AGPSGPGPAGPPGPAGP-AGNDGAPGAPGGPGE 208
Score = 27.5 bits (58), Expect = 2.0
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = -2
Query: 306 AGVAGLAAPPVTPPGGAEP*AGTSGPPQRPG 214
AG AG P P G EP A G P PG
Sbjct: 191 AGPAGNDGAPGAPGGPGEPGASEQGGPGEPG 221
Score = 25.8 bits (54), Expect = 6.0
Identities = 15/35 (42%), Positives = 16/35 (45%)
Frame = +2
Query: 203 CAWAPGLCGGPDVPAHGSAPPGGVTGGAASPATPA 307
C PG GP PA PP G G SPA P+
Sbjct: 147 CQPCPGGPPGPAGPAGPPGPP-GPDGNPGSPAGPS 180
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 27.5 bits (58), Expect = 2.0
Identities = 13/24 (54%), Positives = 14/24 (58%), Gaps = 1/24 (4%)
Frame = -2
Query: 282 PPVTP-PGGAEP*AGTSGPPQRPG 214
PP P PGG AG +GPP PG
Sbjct: 145 PPCQPCPGGPPGPAGPAGPPGPPG 168
Score = 27.5 bits (58), Expect = 2.0
Identities = 15/33 (45%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Frame = -2
Query: 297 AGLAAP-PVTPPGGAEP*AGTSGPPQRPGAQAQ 202
AG + P P PPG A P AG G P PG +
Sbjct: 177 AGPSGPGPAGPPGPAGP-AGNDGAPGAPGGPGE 208
Score = 27.5 bits (58), Expect = 2.0
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = -2
Query: 306 AGVAGLAAPPVTPPGGAEP*AGTSGPPQRPG 214
AG AG P P G EP A G P PG
Sbjct: 191 AGPAGNDGAPGAPGGPGEPGASEQGGPGEPG 221
Score = 25.8 bits (54), Expect = 6.0
Identities = 15/35 (42%), Positives = 16/35 (45%)
Frame = +2
Query: 203 CAWAPGLCGGPDVPAHGSAPPGGVTGGAASPATPA 307
C PG GP PA PP G G SPA P+
Sbjct: 147 CQPCPGGPPGPAGPAGPPGPP-GPDGNPGSPAGPS 180
>U55373-5|AAC25888.1| 289|Caenorhabditis elegans Collagen protein
140, isoform a protein.
Length = 289
Score = 27.5 bits (58), Expect = 2.0
Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Frame = -2
Query: 303 GVAGLAAPPVTPPGGAEP*A-GTSGPPQRPGAQAQRETLGVRSRQS 169
G AG A P +P E G +G P PGA + T GVR +
Sbjct: 226 GEAGPAGQPGSPGNDGESGKPGNAGRPGPPGAPGKNGTPGVRGEDA 271
>U55366-4|AAA97982.1| 310|Caenorhabditis elegans Collagen protein
139 protein.
Length = 310
Score = 27.5 bits (58), Expect = 2.0
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = +2
Query: 206 AWAPGLCGGPDVPAHGSAPPGGVTGGAASPATP 304
A PG G P P AP GV GG+ +P P
Sbjct: 163 AGEPGHDGAPGAPGKPGAP--GVGGGSGAPGAP 193
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 2 (col-2) gene, complete
cds. ).
Length = 301
Score = 27.5 bits (58), Expect = 2.0
Identities = 13/24 (54%), Positives = 14/24 (58%), Gaps = 1/24 (4%)
Frame = -2
Query: 282 PPVTP-PGGAEP*AGTSGPPQRPG 214
PP P PGG AG +GPP PG
Sbjct: 145 PPCQPCPGGPPGPAGPAGPPGPPG 168
Score = 27.5 bits (58), Expect = 2.0
Identities = 15/33 (45%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Frame = -2
Query: 297 AGLAAP-PVTPPGGAEP*AGTSGPPQRPGAQAQ 202
AG + P P PPG A P AG G P PG +
Sbjct: 177 AGPSGPGPAGPPGPAGP-AGNDGAPGAPGGPGE 208
Score = 27.5 bits (58), Expect = 2.0
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = -2
Query: 306 AGVAGLAAPPVTPPGGAEP*AGTSGPPQRPG 214
AG AG P P G EP A G P PG
Sbjct: 191 AGPAGNDGAPGAPGGPGEPGASEQGGPGEPG 221
Score = 25.8 bits (54), Expect = 6.0
Identities = 15/35 (42%), Positives = 16/35 (45%)
Frame = +2
Query: 203 CAWAPGLCGGPDVPAHGSAPPGGVTGGAASPATPA 307
C PG GP PA PP G G SPA P+
Sbjct: 147 CQPCPGGPPGPAGPAGPPGPP-GPDGNPGSPAGPS 180
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 27.5 bits (58), Expect = 2.0
Identities = 13/24 (54%), Positives = 14/24 (58%), Gaps = 1/24 (4%)
Frame = -2
Query: 282 PPVTP-PGGAEP*AGTSGPPQRPG 214
PP P PGG AG +GPP PG
Sbjct: 145 PPCQPCPGGPPGPAGPAGPPGPPG 168
Score = 27.5 bits (58), Expect = 2.0
Identities = 15/33 (45%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Frame = -2
Query: 297 AGLAAP-PVTPPGGAEP*AGTSGPPQRPGAQAQ 202
AG + P P PPG A P AG G P PG +
Sbjct: 177 AGPSGPGPAGPPGPAGP-AGNDGAPGAPGGPGE 208
Score = 27.5 bits (58), Expect = 2.0
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = -2
Query: 306 AGVAGLAAPPVTPPGGAEP*AGTSGPPQRPG 214
AG AG P P G EP A G P PG
Sbjct: 191 AGPAGNDGAPGAPGGPGEPGASEQGGPGEPG 221
Score = 25.8 bits (54), Expect = 6.0
Identities = 15/35 (42%), Positives = 16/35 (45%)
Frame = +2
Query: 203 CAWAPGLCGGPDVPAHGSAPPGGVTGGAASPATPA 307
C PG GP PA PP G G SPA P+
Sbjct: 147 CQPCPGGPPGPAGPAGPPGPP-GPDGNPGSPAGPS 180
>AL031632-7|CAA21009.2| 1528|Caenorhabditis elegans Hypothetical
protein Y32B12B.4 protein.
Length = 1528
Score = 27.5 bits (58), Expect = 2.0
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = -3
Query: 227 HRGPAPRHSEKHSASEADRAERLLPGALRDAPSPE 123
H GP E+H +E D E LL G L D P +
Sbjct: 258 HSGPVAMKMEEHEETEEDFLE-LLNGTLDDVPDSD 291
>AC024847-5|AAN73850.1| 792|Caenorhabditis elegans Ww domain
protein (e3 ubiquitinligase) protein 1, isoform b
protein.
Length = 792
Score = 27.5 bits (58), Expect = 2.0
Identities = 13/48 (27%), Positives = 22/48 (45%)
Frame = -1
Query: 304 RGSGAXSPAGHPSGRCRAVSRDIRTTTEARRPGTARNTRRPKPTELSA 161
R +G + + + S + T++ ARRP TA+ PT +A
Sbjct: 155 RSAGVRAETAASASSEASTSNGVATSSSARRPATAKRDTLAAPTSTAA 202
>AC024847-4|AAN73849.1| 794|Caenorhabditis elegans Ww domain
protein (e3 ubiquitinligase) protein 1, isoform a
protein.
Length = 794
Score = 27.5 bits (58), Expect = 2.0
Identities = 13/48 (27%), Positives = 22/48 (45%)
Frame = -1
Query: 304 RGSGAXSPAGHPSGRCRAVSRDIRTTTEARRPGTARNTRRPKPTELSA 161
R +G + + + S + T++ ARRP TA+ PT +A
Sbjct: 155 RSAGVRAETAASASSEASTSNGVATSSSARRPATAKRDTLAAPTSTAA 202
>Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical
protein W01F3.3 protein.
Length = 2175
Score = 27.1 bits (57), Expect = 2.6
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -1
Query: 232 TTTEARRPGTARNTRRPKPTELSACCRERSETP 134
TTT +RP T T P+P E +E++E P
Sbjct: 163 TTTTTKRPPTTTTTEDPQPFEFHE-LQEQAENP 194
>Z82083-5|CAB04973.1| 298|Caenorhabditis elegans Hypothetical
protein ZK1010.7 protein.
Length = 298
Score = 27.1 bits (57), Expect = 2.6
Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Frame = -2
Query: 303 GVAGLAAPPVTPPG--GAEP*AGTSGPPQRPGAQAQR 199
G G PP PPG G AG +G P +PG Q +R
Sbjct: 242 GAPGPQGPP-GPPGQQGHPGQAGPAGQPGQPGPQGER 277
>Z81042-1|CAB02795.1| 1657|Caenorhabditis elegans Hypothetical
protein C27H6.1 protein.
Length = 1657
Score = 27.1 bits (57), Expect = 2.6
Identities = 17/68 (25%), Positives = 28/68 (41%)
Frame = -1
Query: 298 SGAXSPAGHPSGRCRAVSRDIRTTTEARRPGTARNTRRPKPTELSACCRERSETPRHRNK 119
+G +PA P R A +D T +A P RP P + +E+ + P +
Sbjct: 681 TGTSAPARPPPARPEAPKKD-ETAVDAAAPPRPPPAARPPPPRPAPANKEKPKEP----E 735
Query: 118 PSRPVWSR 95
P W++
Sbjct: 736 PEEDAWAQ 743
>Z77132-3|CAB00860.1| 310|Caenorhabditis elegans Hypothetical
protein F54D1.3 protein.
Length = 310
Score = 27.1 bits (57), Expect = 2.6
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -2
Query: 285 APPVTPPGGAEP*AGTSGPPQRPGAQAQR 199
A P P G + P AG +GP +PG QR
Sbjct: 165 AGPAGPAGSSGP-AGPAGPSGQPGTPGQR 192
>Z77132-2|CAB00858.1| 294|Caenorhabditis elegans Hypothetical
protein F54D1.2 protein.
Length = 294
Score = 27.1 bits (57), Expect = 2.6
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -2
Query: 285 APPVTPPGGAEP*AGTSGPPQRPGAQAQR 199
A P P G + P AG +GP +PG QR
Sbjct: 149 AGPAGPAGSSGP-AGPAGPSGQPGTPGQR 176
>Z75541-4|CAA99858.1| 146|Caenorhabditis elegans Hypothetical
protein F52B5.6 protein.
Length = 146
Score = 27.1 bits (57), Expect = 2.6
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = -1
Query: 250 VSRDIRTTTEARRPGTARNTRRPKPTELSACCRERSET 137
V +++RT+ RRP T R P+ SA R++ ++
Sbjct: 26 VRKNVRTSVHFRRPKTLVTARAPRYARKSAPARDKLDS 63
>Z69787-1|CAA93642.1| 300|Caenorhabditis elegans Hypothetical
protein C44C10.1 protein.
Length = 300
Score = 27.1 bits (57), Expect = 2.6
Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Frame = -2
Query: 300 VAGLAAPPVTP-PGGAEP*AGTSGPPQRPGAQAQRETLG 187
V G A P P P G AG+ G P PG+Q + +G
Sbjct: 221 VPGPAGAPGAPGPDGPAGPAGSPGAPGNPGSQGSQGPVG 259
>Z68335-1|CAA92729.1| 299|Caenorhabditis elegans Hypothetical
protein C29F4.1 protein.
Length = 299
Score = 27.1 bits (57), Expect = 2.6
Identities = 17/36 (47%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Frame = -2
Query: 303 GVAGLAAP--PVTPPGGAEP*AGTSGPPQRPGAQAQ 202
G G AP P+TP GA AG +GP +PGA Q
Sbjct: 202 GQPGQDAPSEPITP--GAPGPAGPAGPQGQPGAPGQ 235
Score = 25.4 bits (53), Expect = 7.9
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = -2
Query: 267 PGGAEP*AGTSGPPQRPG 214
PG A P AGT G P RPG
Sbjct: 102 PGAAGP-AGTPGKPGRPG 118
>Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1759
Score = 27.1 bits (57), Expect = 2.6
Identities = 14/30 (46%), Positives = 15/30 (50%)
Frame = -2
Query: 303 GVAGLAAPPVTPPGGAEP*AGTSGPPQRPG 214
G G + PP PPGG G GPP PG
Sbjct: 347 GPKGNSGPP-GPPGGGTFNDGAPGPPGLPG 375
Score = 26.2 bits (55), Expect = 4.5
Identities = 15/32 (46%), Positives = 15/32 (46%), Gaps = 2/32 (6%)
Frame = +2
Query: 215 PGLCGGPDVPAHGSAPPGGVTG--GAASPATP 304
PG G P P GS P G G GA PA P
Sbjct: 208 PGEAGSPGNPGIGSIGPKGDPGDIGAMGPAGP 239
>Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1758
Score = 27.1 bits (57), Expect = 2.6
Identities = 14/30 (46%), Positives = 15/30 (50%)
Frame = -2
Query: 303 GVAGLAAPPVTPPGGAEP*AGTSGPPQRPG 214
G G + PP PPGG G GPP PG
Sbjct: 346 GPKGNSGPP-GPPGGGTFNDGAPGPPGLPG 374
>U53344-2|AAP13769.1| 301|Caenorhabditis elegans Collagen protein
166, isoform b protein.
Length = 301
Score = 27.1 bits (57), Expect = 2.6
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = +2
Query: 206 AWAPGLCGGPDVPAHGSAPPGGVTGGAASPATP 304
A +PG G P + G P G GGA SP P
Sbjct: 241 AGSPGAPGNPG--SQGPQGPAGDNGGAGSPGQP 271
Score = 25.8 bits (54), Expect = 6.0
Identities = 15/39 (38%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
Frame = -2
Query: 300 VAGLAAPPVTP-PGGAEP*AGTSGPPQRPGAQAQRETLG 187
V G A P P P G AG+ G P PG+Q + G
Sbjct: 222 VPGPAGAPGAPGPDGPAGPAGSPGAPGNPGSQGPQGPAG 260
>U53344-1|AAA96223.1| 363|Caenorhabditis elegans Collagen protein
166, isoform a protein.
Length = 363
Score = 27.1 bits (57), Expect = 2.6
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = +2
Query: 206 AWAPGLCGGPDVPAHGSAPPGGVTGGAASPATP 304
A +PG G P + G P G GGA SP P
Sbjct: 303 AGSPGAPGNPG--SQGPQGPAGDNGGAGSPGQP 333
Score = 25.8 bits (54), Expect = 6.0
Identities = 15/39 (38%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
Frame = -2
Query: 300 VAGLAAPPVTP-PGGAEP*AGTSGPPQRPGAQAQRETLG 187
V G A P P P G AG+ G P PG+Q + G
Sbjct: 284 VPGPAGAPGAPGPDGPAGPAGSPGAPGNPGSQGPQGPAG 322
>U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein 2,
isoform a protein.
Length = 1758
Score = 27.1 bits (57), Expect = 2.6
Identities = 14/30 (46%), Positives = 15/30 (50%)
Frame = -2
Query: 303 GVAGLAAPPVTPPGGAEP*AGTSGPPQRPG 214
G G + PP PPGG G GPP PG
Sbjct: 346 GPKGNSGPP-GPPGGGTFNDGAPGPPGLPG 374
>U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein 2,
isoform b protein.
Length = 1759
Score = 27.1 bits (57), Expect = 2.6
Identities = 14/30 (46%), Positives = 15/30 (50%)
Frame = -2
Query: 303 GVAGLAAPPVTPPGGAEP*AGTSGPPQRPG 214
G G + PP PPGG G GPP PG
Sbjct: 347 GPKGNSGPP-GPPGGGTFNDGAPGPPGLPG 375
Score = 26.2 bits (55), Expect = 4.5
Identities = 15/32 (46%), Positives = 15/32 (46%), Gaps = 2/32 (6%)
Frame = +2
Query: 215 PGLCGGPDVPAHGSAPPGGVTG--GAASPATP 304
PG G P P GS P G G GA PA P
Sbjct: 208 PGEAGSPGNPGIGSIGPKGDPGDIGAMGPAGP 239
>U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protein
33 protein.
Length = 304
Score = 27.1 bits (57), Expect = 2.6
Identities = 14/27 (51%), Positives = 15/27 (55%), Gaps = 2/27 (7%)
Frame = -2
Query: 279 PVTPPG--GAEP*AGTSGPPQRPGAQA 205
P PPG GA AGT+G P PG A
Sbjct: 157 PAGPPGPPGAPGDAGTNGAPGAPGGDA 183
Score = 26.6 bits (56), Expect = 3.4
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = -2
Query: 279 PVTPPGGAEP*AGTSGPPQRPGAQAQRETLG 187
P+TPP G +GPP PGA T G
Sbjct: 144 PITPPPCKPCPDGPAGPPGPPGAPGDAGTNG 174
Score = 26.6 bits (56), Expect = 3.4
Identities = 16/37 (43%), Positives = 17/37 (45%), Gaps = 2/37 (5%)
Frame = -2
Query: 306 AGVAGLAAPPV--TPPGGAEP*AGTSGPPQRPGAQAQ 202
AG G P PPG A P G GPP PGA +
Sbjct: 170 AGTNGAPGAPGGDAPPGEAGP-KGPPGPPGSPGAPGE 205
Score = 26.6 bits (56), Expect = 3.4
Identities = 14/31 (45%), Positives = 15/31 (48%)
Frame = -2
Query: 303 GVAGLAAPPVTPPGGAEP*AGTSGPPQRPGA 211
G AG P P G P G+ GPP PGA
Sbjct: 233 GQAGPDGQPGAPGGPGTP--GSKGPPGNPGA 261
Score = 25.8 bits (54), Expect = 6.0
Identities = 17/38 (44%), Positives = 17/38 (44%)
Frame = -2
Query: 303 GVAGLAAPPVTPPGGAEP*AGTSGPPQRPGAQAQRETL 190
G AG PP PPG G G P RPG A E L
Sbjct: 186 GEAGPKGPP-GPPGSP----GAPGEPGRPGDDAPSEPL 218
>U39644-6|AAO44907.1| 300|Caenorhabditis elegans Collagen protein
170 protein.
Length = 300
Score = 27.1 bits (57), Expect = 2.6
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = +2
Query: 206 AWAPGLCGGPDVPAHGSAPPGGVTGGAASPATP 304
A +PG G P + G P G GGA SP P
Sbjct: 240 AGSPGAPGNPG--SQGPQGPAGDNGGAGSPGQP 270
Score = 25.8 bits (54), Expect = 6.0
Identities = 15/39 (38%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
Frame = -2
Query: 300 VAGLAAPPVTP-PGGAEP*AGTSGPPQRPGAQAQRETLG 187
V G A P P P G AG+ G P PG+Q + G
Sbjct: 221 VPGPAGAPGAPGPDGPAGPAGSPGAPGNPGSQGPQGPAG 259
>U39644-5|AAO44906.1| 300|Caenorhabditis elegans Collagen protein
169 protein.
Length = 300
Score = 27.1 bits (57), Expect = 2.6
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = +2
Query: 206 AWAPGLCGGPDVPAHGSAPPGGVTGGAASPATP 304
A +PG G P + G P G GGA SP P
Sbjct: 240 AGSPGAPGNPG--SQGPQGPAGDNGGAGSPGQP 270
Score = 25.8 bits (54), Expect = 6.0
Identities = 15/39 (38%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
Frame = -2
Query: 300 VAGLAAPPVTP-PGGAEP*AGTSGPPQRPGAQAQRETLG 187
V G A P P P G AG+ G P PG+Q + G
Sbjct: 221 VPGPAGAPGAPGPDGPAGPAGSPGAPGNPGSQGPQGPAG 259
>U39644-4|AAA80357.2| 301|Caenorhabditis elegans Collagen protein
168 protein.
Length = 301
Score = 27.1 bits (57), Expect = 2.6
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = +2
Query: 206 AWAPGLCGGPDVPAHGSAPPGGVTGGAASPATP 304
A +PG G P + G P G GGA SP P
Sbjct: 241 AGSPGAPGNPG--SQGPQGPAGDNGGAGSPGQP 271
Score = 25.8 bits (54), Expect = 6.0
Identities = 15/39 (38%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
Frame = -2
Query: 300 VAGLAAPPVTP-PGGAEP*AGTSGPPQRPGAQAQRETLG 187
V G A P P P G AG+ G P PG+Q + G
Sbjct: 222 VPGPAGAPGAPGPDGPAGPAGSPGAPGNPGSQGPQGPAG 260
>U39644-3|AAA80358.2| 301|Caenorhabditis elegans Collagen protein
167 protein.
Length = 301
Score = 27.1 bits (57), Expect = 2.6
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = +2
Query: 206 AWAPGLCGGPDVPAHGSAPPGGVTGGAASPATP 304
A +PG G P + G P G GGA SP P
Sbjct: 241 AGSPGAPGNPG--SQGPQGPAGDNGGAGSPGQP 271
Score = 25.8 bits (54), Expect = 6.0
Identities = 15/39 (38%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
Frame = -2
Query: 300 VAGLAAPPVTP-PGGAEP*AGTSGPPQRPGAQAQRETLG 187
V G A P P P G AG+ G P PG+Q + G
Sbjct: 222 VPGPAGAPGAPGPDGPAGPAGSPGAPGNPGSQGPQGPAG 260
>U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV)
collagen protein.
Length = 1795
Score = 27.1 bits (57), Expect = 2.6
Identities = 14/30 (46%), Positives = 15/30 (50%)
Frame = -2
Query: 303 GVAGLAAPPVTPPGGAEP*AGTSGPPQRPG 214
G G + PP PPGG G GPP PG
Sbjct: 383 GPKGNSGPP-GPPGGGTFNDGAPGPPGLPG 411
>Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical
protein F28D9.1 protein.
Length = 601
Score = 26.6 bits (56), Expect = 3.4
Identities = 16/48 (33%), Positives = 20/48 (41%)
Frame = -1
Query: 256 RAVSRDIRTTTEARRPGTARNTRRPKPTELSACCRERSETPRHRNKPS 113
RA SR ARR + ++ P P A R +S R R PS
Sbjct: 333 RAKSRSKSPPAPARRRRSPSASKSPPPAPKRAKSRSKSPPARRRRSPS 380
>Z81115-4|CAB03294.2| 651|Caenorhabditis elegans Hypothetical
protein T05D4.4 protein.
Length = 651
Score = 26.6 bits (56), Expect = 3.4
Identities = 18/50 (36%), Positives = 22/50 (44%), Gaps = 6/50 (12%)
Frame = -2
Query: 303 GVAGLAAPPVTPPGGAEP*AGTSG------PPQRPGAQAQRETLGVRSRQ 172
G GL + P T GG E G G PQR +A R+ V +RQ
Sbjct: 412 GAVGLKSSPATLKGGGEAQGGLDGLLASVTQPQRERDEAARQWATVDARQ 461
>Z78064-1|CAB01509.1| 313|Caenorhabditis elegans Hypothetical
protein F57B1.3 protein.
Length = 313
Score = 26.6 bits (56), Expect = 3.4
Identities = 20/54 (37%), Positives = 22/54 (40%), Gaps = 3/54 (5%)
Frame = -2
Query: 303 GVAGLAAPPVTP-PGGA--EP*AGTSGPPQRPGAQAQRETLGVRSRQS*ALAAG 151
G G A PP P P GA +P SG P PG Q G + A A G
Sbjct: 237 GTPGPAGPPGPPGPAGAPGQPGQSGSGQPGGPGPQGDAGAPGAPGQPGQAGAPG 290
>Z77662-14|CAI79239.1| 245|Caenorhabditis elegans Hypothetical
protein F47B8.13 protein.
Length = 245
Score = 26.6 bits (56), Expect = 3.4
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = -2
Query: 306 AGVAGLAAPPVTPPGGAEP*AGTSGPPQRPGAQA 205
+G AG+ APP PP A P A P P +A
Sbjct: 30 SGGAGVEAPPPPPPADAAP-APAPEPAPAPAPEA 62
>Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical
protein F23H12.4 protein.
Length = 301
Score = 26.6 bits (56), Expect = 3.4
Identities = 18/52 (34%), Positives = 18/52 (34%)
Frame = -2
Query: 279 PVTPPGGAEP*AGTSGPPQRPGAQAQRETLGVRSRQS*ALAAGSAQRRPVTG 124
P TPP G GPP PGA G R A GS R G
Sbjct: 141 PTTPPPCKPCPQGPPGPPGPPGAPGDPGEAGTPGRPGTDAAPGSPGPRGPPG 192
Score = 26.6 bits (56), Expect = 3.4
Identities = 18/46 (39%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Frame = -2
Query: 282 PPVTP-PGGAEP*AGTSGPPQRPGAQAQRETLGVRSRQS*ALAAGS 148
PP P P GA G +G P RPG A + G R A AG+
Sbjct: 154 PPGPPGPPGAPGDPGEAGTPGRPGTDAAPGSPGPRGPPGPAGEAGA 199
Score = 25.8 bits (54), Expect = 6.0
Identities = 16/33 (48%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
Frame = -2
Query: 306 AGVAGLAA--PPVTPPGGAEP*AGTSGPPQRPG 214
AG G A P+TP EP G SGPP PG
Sbjct: 203 AGEPGTPAISEPLTPGAPGEP--GDSGPPGPPG 233
>Z70756-6|CAA94792.1| 290|Caenorhabditis elegans Hypothetical
protein T06E4.6 protein.
Length = 290
Score = 26.6 bits (56), Expect = 3.4
Identities = 18/53 (33%), Positives = 20/53 (37%)
Frame = -2
Query: 303 GVAGLAAPPVTPPGGAEP*AGTSGPPQRPGAQAQRETLGVRSRQS*ALAAGSA 145
G AG P P G + GT GP PG Q G + A A G A
Sbjct: 179 GQAGAPGHPGAPGQGGQRSRGTPGPAGAPGPQGPAGGPGQPGQSGGAGAPGPA 231
>Z70756-4|CAA94788.1| 290|Caenorhabditis elegans Hypothetical
protein T06E4.4 protein.
Length = 290
Score = 26.6 bits (56), Expect = 3.4
Identities = 18/53 (33%), Positives = 20/53 (37%)
Frame = -2
Query: 303 GVAGLAAPPVTPPGGAEP*AGTSGPPQRPGAQAQRETLGVRSRQS*ALAAGSA 145
G AG P P G + GT GP PG Q G + A A G A
Sbjct: 179 GQAGAPGHPGAPGQGGQRSRGTPGPSGAPGPQGPAGGPGQPGQSGGAGAPGPA 231
Score = 26.2 bits (55), Expect = 4.5
Identities = 15/42 (35%), Positives = 17/42 (40%), Gaps = 3/42 (7%)
Frame = +2
Query: 188 PSVSRCAWAPGLCGGPDVPAH---GSAPPGGVTGGAASPATP 304
P ++ A APG G P P AP GG PA P
Sbjct: 127 PCITCPAGAPGPAGAPGAPGPQGPSGAPGQDAVGGGPGPAGP 168
>Z68104-5|CAA92114.2| 102|Caenorhabditis elegans Hypothetical
protein F08B12.4 protein.
Length = 102
Score = 26.6 bits (56), Expect = 3.4
Identities = 15/30 (50%), Positives = 17/30 (56%), Gaps = 4/30 (13%)
Frame = +2
Query: 218 GLCGGPDVP----AHGSAPPGGVTGGAASP 295
G GG VP A G A GG+TGG+A P
Sbjct: 27 GKTGGSSVPHPNSAAGQALSGGMTGGSAVP 56
>Z54237-5|CAN86900.1| 273|Caenorhabditis elegans Hypothetical
protein T11B7.3b protein.
Length = 273
Score = 26.6 bits (56), Expect = 3.4
Identities = 15/36 (41%), Positives = 16/36 (44%)
Frame = -2
Query: 303 GVAGLAAPPVTPPGGAEP*AGTSGPPQRPGAQAQRE 196
G GL PP GA G G P PGA QR+
Sbjct: 176 GKPGLPGPP--GDAGAPGAPGQDGAPGHPGADGQRQ 209
>Z54237-4|CAN86899.1| 297|Caenorhabditis elegans Hypothetical
protein T11B7.3a protein.
Length = 297
Score = 26.6 bits (56), Expect = 3.4
Identities = 15/36 (41%), Positives = 16/36 (44%)
Frame = -2
Query: 303 GVAGLAAPPVTPPGGAEP*AGTSGPPQRPGAQAQRE 196
G GL PP GA G G P PGA QR+
Sbjct: 176 GKPGLPGPP--GDAGAPGAPGQDGAPGHPGADGQRQ 209
>Z27078-7|CAE52901.2| 1502|Caenorhabditis elegans Hypothetical
protein K04H4.1b protein.
Length = 1502
Score = 26.6 bits (56), Expect = 3.4
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = -2
Query: 279 PVTPPGGAEP*AGTSGPPQRPGAQAQRETLG 187
PV PPG G GPP PG + Q+ LG
Sbjct: 274 PVGPPGML----GLDGPPGYPGLKGQKGDLG 300
>Z27078-6|CAA81584.4| 1759|Caenorhabditis elegans Hypothetical
protein K04H4.1a protein.
Length = 1759
Score = 26.6 bits (56), Expect = 3.4
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = -2
Query: 279 PVTPPGGAEP*AGTSGPPQRPGAQAQRETLG 187
PV PPG G GPP PG + Q+ LG
Sbjct: 274 PVGPPGML----GLDGPPGYPGLKGQKGDLG 300
>X56979-1|CAA40299.1| 1758|Caenorhabditis elegans alpha1(IV)
collagen protein.
Length = 1758
Score = 26.6 bits (56), Expect = 3.4
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = -2
Query: 279 PVTPPGGAEP*AGTSGPPQRPGAQAQRETLG 187
PV PPG G GPP PG + Q+ LG
Sbjct: 274 PVGPPGML----GLDGPPGYPGLKGQKGDLG 300
>V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-1 coding for a collagen.
).
Length = 296
Score = 26.6 bits (56), Expect = 3.4
Identities = 18/52 (34%), Positives = 18/52 (34%)
Frame = -2
Query: 279 PVTPPGGAEP*AGTSGPPQRPGAQAQRETLGVRSRQS*ALAAGSAQRRPVTG 124
P TPP G GPP PGA G R A GS R G
Sbjct: 136 PTTPPPCKPCPQGPPGPPGPPGAPGDPGEAGTPGRPGTDAAPGSPGPRGPPG 187
Score = 26.6 bits (56), Expect = 3.4
Identities = 18/46 (39%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Frame = -2
Query: 282 PPVTP-PGGAEP*AGTSGPPQRPGAQAQRETLGVRSRQS*ALAAGS 148
PP P P GA G +G P RPG A + G R A AG+
Sbjct: 149 PPGPPGPPGAPGDPGEAGTPGRPGTDAAPGSPGPRGPPGPAGEAGA 194
Score = 25.8 bits (54), Expect = 6.0
Identities = 16/33 (48%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
Frame = -2
Query: 306 AGVAGLAA--PPVTPPGGAEP*AGTSGPPQRPG 214
AG G A P+TP EP G SGPP PG
Sbjct: 198 AGEPGTPAISEPLTPGAPGEP--GDSGPPGPPG 228
>U70849-7|AAF99925.2| 332|Caenorhabditis elegans Collagen protein
111 protein.
Length = 332
Score = 26.6 bits (56), Expect = 3.4
Identities = 13/39 (33%), Positives = 16/39 (41%)
Frame = -2
Query: 303 GVAGLAAPPVTPPGGAEP*AGTSGPPQRPGAQAQRETLG 187
G G PP G + G +GPP +PG T G
Sbjct: 226 GAPGPVGPPGVAEEGPDGLPGPAGPPGKPGMPGPMGTPG 264
>U67953-4|AAL13329.1| 732|Caenorhabditis elegans Hypothetical
protein ZC13.3 protein.
Length = 732
Score = 26.6 bits (56), Expect = 3.4
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = -1
Query: 214 RPGTARNTRRPKPTEL 167
RP T + T++PKPTE+
Sbjct: 189 RPWTVKQTKKPKPTEV 204
>U40029-11|AAA81130.1| 914|Caenorhabditis elegans Tudor
staphylococcal nuclease homologprotein 1 protein.
Length = 914
Score = 26.6 bits (56), Expect = 3.4
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +2
Query: 221 LCGGPDVPAHGSAPPGGVTGGAASP 295
L GG + P PGGV+ GAA P
Sbjct: 553 LLGGINCPKGARVGPGGVSTGAAEP 577
>J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 1 (col-1) gene, complete
cds. ).
Length = 296
Score = 26.6 bits (56), Expect = 3.4
Identities = 18/52 (34%), Positives = 18/52 (34%)
Frame = -2
Query: 279 PVTPPGGAEP*AGTSGPPQRPGAQAQRETLGVRSRQS*ALAAGSAQRRPVTG 124
P TPP G GPP PGA G R A GS R G
Sbjct: 136 PTTPPPCKPCPQGPPGPPGPPGAPGDPGEAGTPGRPGTDAAPGSPGPRGPPG 187
Score = 26.6 bits (56), Expect = 3.4
Identities = 18/46 (39%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Frame = -2
Query: 282 PPVTP-PGGAEP*AGTSGPPQRPGAQAQRETLGVRSRQS*ALAAGS 148
PP P P GA G +G P RPG A + G R A AG+
Sbjct: 149 PPGPPGPPGAPGDPGEAGTPGRPGTDAAPGSPGPRGPPGPAGEAGA 194
Score = 25.8 bits (54), Expect = 6.0
Identities = 16/33 (48%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
Frame = -2
Query: 306 AGVAGLAA--PPVTPPGGAEP*AGTSGPPQRPG 214
AG G A P+TP EP G SGPP PG
Sbjct: 198 AGEPGTPAISEPLTPGAPGEP--GDSGPPGPPG 228
>AF303263-1|AAG50221.1| 102|Caenorhabditis elegans XM26 protein.
Length = 102
Score = 26.6 bits (56), Expect = 3.4
Identities = 15/30 (50%), Positives = 17/30 (56%), Gaps = 4/30 (13%)
Frame = +2
Query: 218 GLCGGPDVP----AHGSAPPGGVTGGAASP 295
G GG VP A G A GG+TGG+A P
Sbjct: 27 GKTGGSSVPHPNSAAGQALSGGMTGGSAVP 56
>AF067607-9|AAF98609.1| 460|Caenorhabditis elegans Collagen protein
102 protein.
Length = 460
Score = 26.6 bits (56), Expect = 3.4
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = +2
Query: 233 PDVPAHGSAPPGGVTGGAASPATP 304
P+ G APP GG ASPA P
Sbjct: 431 PEGAGGGEAPPTNGKGGEASPAYP 454
>AC024775-6|AAK68452.2| 304|Caenorhabditis elegans Collagen protein
108 protein.
Length = 304
Score = 26.6 bits (56), Expect = 3.4
Identities = 16/36 (44%), Positives = 18/36 (50%)
Frame = -2
Query: 294 GLAAPPVTPPGGAEP*AGTSGPPQRPGAQAQRETLG 187
G A PP PPG A AG+ G P PG+ Q G
Sbjct: 156 GPAGPP-GPPGPAGD-AGSDGSPGAPGSDGQPGAAG 189
Score = 25.4 bits (53), Expect = 7.9
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = -2
Query: 267 PGGAEP*AGTSGPPQRPG 214
PG A P AGT G P RPG
Sbjct: 107 PGAAGP-AGTPGKPGRPG 123
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 26.2 bits (55), Expect = 4.5
Identities = 14/31 (45%), Positives = 14/31 (45%), Gaps = 4/31 (12%)
Frame = -2
Query: 294 GLAAPPVTP----PGGAEP*AGTSGPPQRPG 214
G APP P PG P GPPQ PG
Sbjct: 442 GSGAPPPGPPGAYPGNGAPGGPPGGPPQFPG 472
>U58755-13|AAB00702.1| 348|Caenorhabditis elegans Collagen protein
113 protein.
Length = 348
Score = 26.2 bits (55), Expect = 4.5
Identities = 13/36 (36%), Positives = 16/36 (44%)
Frame = -2
Query: 279 PVTPPGGAEP*AGTSGPPQRPGAQAQRETLGVRSRQ 172
P PPG P +G GPP PG + G +Q
Sbjct: 159 PTGPPGETGP-SGPEGPPGNPGRIGEHGREGYPGQQ 193
>AL032627-19|CAD66222.1| 309|Caenorhabditis elegans Hypothetical
protein Y41C4A.16 protein.
Length = 309
Score = 26.2 bits (55), Expect = 4.5
Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 3/37 (8%)
Frame = -2
Query: 294 GLAAP-PVTPPG--GAEP*AGTSGPPQRPGAQAQRET 193
G AP P P G GA G +G P RPG AQ ++
Sbjct: 186 GSGAPGPAGPKGQRGAPGHPGQAGSPGRPGVDAQSQS 222
>AF016687-1|AAC48094.2| 315|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 9 protein.
Length = 315
Score = 26.2 bits (55), Expect = 4.5
Identities = 15/45 (33%), Positives = 20/45 (44%), Gaps = 2/45 (4%)
Frame = -2
Query: 303 GVAG--LAAPPVTPPGGAEP*AGTSGPPQRPGAQAQRETLGVRSR 175
G+AG L APP + G GPP PG + R G+ +
Sbjct: 121 GIAGKYLPAPPPGTNACQKCPTGAPGPPGLPGPKGPRGPAGIEGK 165
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 26.2 bits (55), Expect = 4.5
Identities = 17/45 (37%), Positives = 19/45 (42%)
Frame = -2
Query: 303 GVAGLAAPPVTPPGGAEP*AGTSGPPQRPGAQAQRETLGVRSRQS 169
G AG + PP PPG P G G P PG Q G + S
Sbjct: 205 GDAG-SPPPPGPPGPPGP-PGNDGQPGAPGQDGQPGAPGTNTVNS 247
>AF000198-7|AAB53052.1| 418|Caenorhabditis elegans Collagen protein
50 protein.
Length = 418
Score = 26.2 bits (55), Expect = 4.5
Identities = 14/32 (43%), Positives = 16/32 (50%), Gaps = 3/32 (9%)
Frame = +2
Query: 212 APGLCGGPD---VPAHGSAPPGGVTGGAASPA 298
AP P PA +AP GG GGAA+ A
Sbjct: 336 APAAAAAPQPAPAPAAAAAPAGGYQGGAAAGA 367
>AC024090-6|AAF35428.1| 70|Caenorhabditis elegans Hypothetical
protein C52E2.2 protein.
Length = 70
Score = 26.2 bits (55), Expect = 4.5
Identities = 14/27 (51%), Positives = 14/27 (51%), Gaps = 1/27 (3%)
Frame = +2
Query: 206 AWAPGLCGGPDVPAHGS-APPGGVTGG 283
AWAP PA GS AP GGV G
Sbjct: 12 AWAPSFGLSQGSPAAGSAAPTGGVNAG 38
>Z95621-2|CAB09131.1| 330|Caenorhabditis elegans Hypothetical
protein ZK863.2 protein.
Length = 330
Score = 25.8 bits (54), Expect = 6.0
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = -2
Query: 306 AGVAGLAAPPVTPPGGAEP*AGTSGPPQRPGAQAQRETLG 187
A +G A P PPG + AG +GP PGA + G
Sbjct: 96 AQASGCPAGPPGPPG-PDGSAGPAGPAGNPGADGDAGSPG 134
>Z92773-2|CAB07132.1| 160|Caenorhabditis elegans Hypothetical
protein W08E3.1 protein.
Length = 160
Score = 25.8 bits (54), Expect = 6.0
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +2
Query: 215 PGLCGGPDVPAHGSAPPGGVTGG 283
PG G P +P PPGG GG
Sbjct: 109 PGGRGMPAMPGMPGMPPGGAPGG 131
>Z81118-1|CAB03329.1| 478|Caenorhabditis elegans Hypothetical
protein R11G10.1b protein.
Length = 478
Score = 25.8 bits (54), Expect = 6.0
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = -3
Query: 239 HQDHHRGPAPRHSEKHSASEADRAE 165
H H R + HS KH+AS +D E
Sbjct: 19 HAYHSRPKSEEHSPKHAASSSDLFE 43
>Z79696-1|CAB01972.1| 1584|Caenorhabditis elegans Hypothetical
protein F54F3.1 protein.
Length = 1584
Score = 25.8 bits (54), Expect = 6.0
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -3
Query: 263 AVQSREQGHQDHHRGPAPRHSEKHS 189
A Q++EQ HQ HH+ P+ + S
Sbjct: 326 ARQAQEQHHQQHHQPDQPQQQPQRS 350
>Z78415-7|CAH60759.1| 844|Caenorhabditis elegans Hypothetical
protein C17G1.4b protein.
Length = 844
Score = 25.8 bits (54), Expect = 6.0
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = -2
Query: 285 APPVTPPGGAEP*AGTSGPPQRPGAQAQR 199
APP GG P G PQ PG Q+
Sbjct: 44 APPANGYGGMPPGPPNIGGPQPPGGSQQK 72
>Z78415-5|CAB01670.1| 925|Caenorhabditis elegans Hypothetical
protein C17G1.4a protein.
Length = 925
Score = 25.8 bits (54), Expect = 6.0
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = -2
Query: 285 APPVTPPGGAEP*AGTSGPPQRPGAQAQR 199
APP GG P G PQ PG Q+
Sbjct: 44 APPANGYGGMPPGPPNIGGPQPPGGSQQK 72
>Z78065-1|CAD54154.1| 547|Caenorhabditis elegans Hypothetical
protein T09E8.1d protein.
Length = 547
Score = 25.8 bits (54), Expect = 6.0
Identities = 12/27 (44%), Positives = 13/27 (48%), Gaps = 1/27 (3%)
Frame = -3
Query: 257 QSREQGHQDHHRGPAPRH-SEKHSASE 180
Q+ H HH PAPRH S H E
Sbjct: 31 QNGNSHHHHHHLPPAPRHLSSSHHQIE 57
>Z78019-9|CAB01457.1| 330|Caenorhabditis elegans Hypothetical
protein ZK863.2 protein.
Length = 330
Score = 25.8 bits (54), Expect = 6.0
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = -2
Query: 306 AGVAGLAAPPVTPPGGAEP*AGTSGPPQRPGAQAQRETLG 187
A +G A P PPG + AG +GP PGA + G
Sbjct: 96 AQASGCPAGPPGPPG-PDGSAGPAGPAGNPGADGDAGSPG 134
>Z75549-4|CAA99919.2| 304|Caenorhabditis elegans Hypothetical
protein T19C4.4 protein.
Length = 304
Score = 25.8 bits (54), Expect = 6.0
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = +1
Query: 4 LRLSKMTMLIQQLNCSSSISKYYNGNGVDSVETKQVEKVYSGDGASLSAP 153
+R++ +T L+Q + S+ +YYN N +V S DG SL P
Sbjct: 218 IRIAFITCLVQACGTALSVIRYYNMNTSMAVTLANFIPFIS-DGLSLVQP 266
>Z68315-7|CAA92672.1| 735|Caenorhabditis elegans Hypothetical
protein F28C6.6 protein.
Length = 735
Score = 25.8 bits (54), Expect = 6.0
Identities = 11/31 (35%), Positives = 13/31 (41%)
Frame = +2
Query: 215 PGLCGGPDVPAHGSAPPGGVTGGAASPATPA 307
P G +VP HG + GGA A A
Sbjct: 549 PSFVGSKNVPTHGPQAASAIMGGAGGHADVA 579
>Z54238-5|CAA90997.1| 299|Caenorhabditis elegans Hypothetical
protein T28C6.6 protein.
Length = 299
Score = 25.8 bits (54), Expect = 6.0
Identities = 17/36 (47%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Frame = -2
Query: 303 GVAGLAAP--PVTPPGGAEP*AGTSGPPQRPGAQAQ 202
G G AP P+TP GA AG +GP PGA Q
Sbjct: 202 GQPGQDAPSEPITP--GAPGPAGPAGPQGPPGAPGQ 235
Score = 25.4 bits (53), Expect = 7.9
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = -2
Query: 267 PGGAEP*AGTSGPPQRPG 214
PG A P AGT G P RPG
Sbjct: 102 PGAAGP-AGTPGKPGRPG 118
>Z54238-3|CAA90995.1| 299|Caenorhabditis elegans Hypothetical
protein T28C6.4 protein.
Length = 299
Score = 25.8 bits (54), Expect = 6.0
Identities = 17/36 (47%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Frame = -2
Query: 303 GVAGLAAP--PVTPPGGAEP*AGTSGPPQRPGAQAQ 202
G G AP P+TP GA AG +GP PGA Q
Sbjct: 202 GQPGQDAPSEPITP--GAPGPAGPAGPQGPPGAPGQ 235
Score = 25.4 bits (53), Expect = 7.9
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = -2
Query: 267 PGGAEP*AGTSGPPQRPG 214
PG A P AGT G P RPG
Sbjct: 102 PGAAGP-AGTPGKPGRPG 118
>Z22178-2|CAA80154.1| 261|Caenorhabditis elegans Hypothetical
protein F54C8.2 protein.
Length = 261
Score = 25.8 bits (54), Expect = 6.0
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +1
Query: 97 ETKQVEKVYSGDGASLSAPGSKRSALSASDAECF-SLCL 210
E + V DG+SL + SKR+ L+ +D + + LCL
Sbjct: 220 EASEALLVQMFDGSSLISAHSKRATLTTTDVQLYRRLCL 258
>U80451-9|AAB37843.1| 285|Caenorhabditis elegans Collagen protein
73 protein.
Length = 285
Score = 25.8 bits (54), Expect = 6.0
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = -2
Query: 285 APPVTPPGGAEP*AGTSGPPQRPGAQAQRETL 190
AP P G AG G P +PGA Q T+
Sbjct: 175 APGAPGPQGPPGTAGNDGTPGQPGAPGQVRTV 206
>U64609-7|AAB04604.3| 373|Caenorhabditis elegans Sperm-specific
family, class qprotein 4 protein.
Length = 373
Score = 25.8 bits (54), Expect = 6.0
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = +2
Query: 215 PGLCGGPDVPAHGSAPPGGVTGGAAS 292
P GG P GSA GG GGA S
Sbjct: 274 PSAFGGAPPPPSGSAMGGGGGGGATS 299
>U41015-4|AAA82313.1| 317|Caenorhabditis elegans Hypothetical
protein F20B6.5 protein.
Length = 317
Score = 25.8 bits (54), Expect = 6.0
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = -2
Query: 300 VAGLAAPPVTPPGGAEP*AGTSGPPQRPGAQAQRETLGVRSRQS 169
++G+ APPVTP SG +P +AQ + R R S
Sbjct: 113 MSGVRAPPVTPRNRQRS-VRPSGSNAQPSGRAQPDYRDTRQRPS 155
>U40802-12|AAK19014.2| 265|Caenorhabditis elegans Sperm-specific
family, class qprotein 3 protein.
Length = 265
Score = 25.8 bits (54), Expect = 6.0
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = +2
Query: 215 PGLCGGPDVPAHGSAPPGGVTGGAAS 292
P GG P GSA GG GGA S
Sbjct: 168 PSAFGGAPPPPSGSAMGGGGGGGATS 193
>U39644-7|AAO44908.1| 307|Caenorhabditis elegans Collagen protein
171 protein.
Length = 307
Score = 25.8 bits (54), Expect = 6.0
Identities = 16/37 (43%), Positives = 19/37 (51%)
Frame = -2
Query: 297 AGLAAPPVTPPGGAEP*AGTSGPPQRPGAQAQRETLG 187
AGL P V P G AGT G P PG+Q + + G
Sbjct: 232 AGL--PGVPGPIGPVGSAGTPGSPGNPGSQGPQGSAG 266
>U29377-3|AAA68720.2| 472|Caenorhabditis elegans Hypothetical
protein K05F1.5 protein.
Length = 472
Score = 25.8 bits (54), Expect = 6.0
Identities = 12/32 (37%), Positives = 15/32 (46%)
Frame = -1
Query: 160 CCRERSETPRHRNKPSRPVWSRRSPHHFHCSI 65
CC S P+ + SRP + HFHC I
Sbjct: 97 CCPITS-LPKRLDSCSRPFCKLKKKAHFHCKI 127
>U23830-1|AAB01508.1| 730|Caenorhabditis elegans suf-1 protein.
Length = 730
Score = 25.8 bits (54), Expect = 6.0
Identities = 11/31 (35%), Positives = 13/31 (41%)
Frame = +2
Query: 215 PGLCGGPDVPAHGSAPPGGVTGGAASPATPA 307
P G +VP HG + GGA A A
Sbjct: 544 PSFVGSKNVPTHGPQAASAIMGGAGGHADVA 574
>M25477-1|AAA27991.1| 329|Caenorhabditis elegans collagen protein.
Length = 329
Score = 25.8 bits (54), Expect = 6.0
Identities = 13/36 (36%), Positives = 15/36 (41%)
Frame = -2
Query: 282 PPVTPPGGAEP*AGTSGPPQRPGAQAQRETLGVRSR 175
PP G + AG GP RPG + G R R
Sbjct: 212 PPQDGKSGDDGMAGQPGPIGRPGRDGMKGAPGARGR 247
>L39893-1|AAA62311.1| 735|Caenorhabditis elegans cleavage
stimulation factor protein.
Length = 735
Score = 25.8 bits (54), Expect = 6.0
Identities = 11/31 (35%), Positives = 13/31 (41%)
Frame = +2
Query: 215 PGLCGGPDVPAHGSAPPGGVTGGAASPATPA 307
P G +VP HG + GGA A A
Sbjct: 549 PSFVGSKNVPTHGPQAASAIMGGAGGHADVA 579
>AY347576-1|AAP97870.1| 299|Caenorhabditis elegans COLlagen
structural gene, probablecuticle component, from embryo
to adult (28.7 kD) (col-3) protein.
Length = 299
Score = 25.8 bits (54), Expect = 6.0
Identities = 17/36 (47%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Frame = -2
Query: 303 GVAGLAAP--PVTPPGGAEP*AGTSGPPQRPGAQAQ 202
G G AP P+TP GA AG +GP PGA Q
Sbjct: 202 GQPGQDAPSEPITP--GAPGPAGPAGPQGPPGAPGQ 235
Score = 25.4 bits (53), Expect = 7.9
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = -2
Query: 267 PGGAEP*AGTSGPPQRPG 214
PG A P AGT G P RPG
Sbjct: 102 PGAAGP-AGTPGKPGRPG 118
>AY347574-1|AAP97868.1| 299|Caenorhabditis elegans COLlagen
structural gene, probablecuticle component, from embryo
to adult (28.7 kD) (col-117) protein.
Length = 299
Score = 25.8 bits (54), Expect = 6.0
Identities = 17/36 (47%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Frame = -2
Query: 303 GVAGLAAP--PVTPPGGAEP*AGTSGPPQRPGAQAQ 202
G G AP P+TP GA AG +GP PGA Q
Sbjct: 202 GQPGQDAPSEPITP--GAPGPAGPAGPQGPPGAPGQ 235
Score = 25.4 bits (53), Expect = 7.9
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = -2
Query: 267 PGGAEP*AGTSGPPQRPG 214
PG A P AGT G P RPG
Sbjct: 102 PGAAGP-AGTPGKPGRPG 118
>AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical
protein Y56A3A.27 protein.
Length = 759
Score = 25.8 bits (54), Expect = 6.0
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +2
Query: 227 GGPDVPAHGSAPPGGVTGGAASPAT 301
GGP P G PP G GG T
Sbjct: 616 GGPGGPGGGGGPPRGPGGGGGGGPT 640
>AL110500-7|CAB54490.1| 489|Caenorhabditis elegans Hypothetical
protein Y87G2A.7 protein.
Length = 489
Score = 25.8 bits (54), Expect = 6.0
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = +1
Query: 4 LRLSKMTMLIQQLNCSSSISKYYNGNGVDSVETKQVEKVYSGDGASLSAPG 156
++LS+ L QQ+ S+ + Y ++ V KQ+ ++ GA PG
Sbjct: 419 IKLSEQLYLDQQIKLICSLCQLYPVKMINKVAIKQLLELVVFAGADFEMPG 469
>AL032627-21|CAD66221.1| 289|Caenorhabditis elegans Hypothetical
protein Y41C4A.19 protein.
Length = 289
Score = 25.8 bits (54), Expect = 6.0
Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
Frame = -2
Query: 297 AGLAAP-PVTPPG--GAEP*AGTSGPPQRPGAQAQRET 193
+G AP P P G GA G +G P +PG AQ ++
Sbjct: 164 SGFGAPGPAGPKGQRGAPGHPGQAGAPGQPGVDAQSQS 201
Score = 25.4 bits (53), Expect = 7.9
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = -2
Query: 267 PGGAEP*AGTSGPPQRPG 214
PG A P AGT G P RPG
Sbjct: 91 PGAAGP-AGTPGKPGRPG 107
>AJ000537-1|CAA04170.1| 478|Caenorhabditis elegans GluClalpha2B
protein protein.
Length = 478
Score = 25.8 bits (54), Expect = 6.0
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = -3
Query: 239 HQDHHRGPAPRHSEKHSASEADRAE 165
H H R + HS KH+AS +D E
Sbjct: 19 HAYHSRPKSEEHSPKHAASSSDLFE 43
>AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA
topoisomerase III protein.
Length = 759
Score = 25.8 bits (54), Expect = 6.0
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +2
Query: 227 GGPDVPAHGSAPPGGVTGGAASPAT 301
GGP P G PP G GG T
Sbjct: 616 GGPGGPGGGGGPPRGPGGGGGGGPT 640
>AF003148-4|AAR25646.1| 301|Caenorhabditis elegans Hypothetical
protein F32B5.6d protein.
Length = 301
Score = 25.8 bits (54), Expect = 6.0
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +2
Query: 221 LCGGPDVPAHGSAPPGGVTGGAASPATPA 307
L P +H S+P T G+ SP+ PA
Sbjct: 258 LSHSPSQSSHSSSPLATPTNGSGSPSVPA 286
>AF003148-1|AAR25644.1| 432|Caenorhabditis elegans Hypothetical
protein F32B5.6a protein.
Length = 432
Score = 25.8 bits (54), Expect = 6.0
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +2
Query: 221 LCGGPDVPAHGSAPPGGVTGGAASPATPA 307
L P +H S+P T G+ SP+ PA
Sbjct: 389 LSHSPSQSSHSSSPLATPTNGSGSPSVPA 417
>AC084154-10|AAK29873.1| 1140|Caenorhabditis elegans Hypothetical
protein Y22D7AR.2 protein.
Length = 1140
Score = 25.8 bits (54), Expect = 6.0
Identities = 18/49 (36%), Positives = 23/49 (46%)
Frame = +2
Query: 155 AASAQLCRLRTPSVSRCAWAPGLCGGPDVPAHGSAPPGGVTGGAASPAT 301
A ++ L RL+TP A L P PA+ PGG G A+ AT
Sbjct: 920 AYASTLTRLKTPG------AQPLHANPGNPANKPTAPGGNKGAASPSAT 962
>Z81503-1|CAB04111.1| 305|Caenorhabditis elegans Hypothetical
protein F14F7.1 protein.
Length = 305
Score = 25.4 bits (53), Expect = 7.9
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = -2
Query: 279 PVTPPGGAEP*AGTSGPPQRPGAQAQ 202
P P G P G GPP RPG+ Q
Sbjct: 148 PCKPCPGGRP--GPPGPPGRPGSDGQ 171
>Z74042-8|CAA98525.1| 299|Caenorhabditis elegans Hypothetical
protein T11F9.9 protein.
Length = 299
Score = 25.4 bits (53), Expect = 7.9
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = -2
Query: 267 PGGAEP*AGTSGPPQRPG 214
PG A P AGT G P RPG
Sbjct: 102 PGAAGP-AGTPGKPGRPG 118
>Z74036-2|CAA98487.1| 266|Caenorhabditis elegans Hypothetical
protein F55C10.3 protein.
Length = 266
Score = 25.4 bits (53), Expect = 7.9
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = -2
Query: 267 PGGAEP*AGTSGPPQRPG 214
PG A P AGT G P RPG
Sbjct: 69 PGAAGP-AGTPGKPGRPG 85
>Z74036-1|CAA98486.1| 299|Caenorhabditis elegans Hypothetical
protein F55C10.2 protein.
Length = 299
Score = 25.4 bits (53), Expect = 7.9
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = -2
Query: 267 PGGAEP*AGTSGPPQRPG 214
PG A P AGT G P RPG
Sbjct: 102 PGAAGP-AGTPGKPGRPG 118
>Z70682-4|CAA94581.1| 299|Caenorhabditis elegans Hypothetical
protein F08G5.4 protein.
Length = 299
Score = 25.4 bits (53), Expect = 7.9
Identities = 18/40 (45%), Positives = 18/40 (45%), Gaps = 2/40 (5%)
Frame = -2
Query: 306 AGVAGLAAPPVTPPG--GAEP*AGTSGPPQRPGAQAQRET 193
AG G A P P G GA AG G P PG QR T
Sbjct: 168 AGQPG-APGPAGPEGDAGAPGDAGAPGAPGAPGQDGQRGT 206
>Z68507-1|CAA92826.1| 337|Caenorhabditis elegans Hypothetical
protein M18.1 protein.
Length = 337
Score = 25.4 bits (53), Expect = 7.9
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = -2
Query: 303 GVAGLAAPPVTPPGGAEP*AGTSGPPQRPGAQAQRETLG 187
G G P++ G AG GPP +PG QR + G
Sbjct: 124 GADGNLGVPLSANGCIVCPAGPPGPPGQPGQNGQRGSDG 162
>Z68221-5|CAJ30235.1| 416|Caenorhabditis elegans Hypothetical
protein W09C2.1b protein.
Length = 416
Score = 25.4 bits (53), Expect = 7.9
Identities = 14/43 (32%), Positives = 20/43 (46%)
Frame = +1
Query: 136 ASLSAPGSKRSALSASDAECFSLCLGAGPLWWS*CPCSRLCTA 264
A+ S+ G+ S S D EC + + PLW + LC A
Sbjct: 198 ANRSSGGANNSQFSTEDRECVNCGVHNTPLWRRDGSGNYLCNA 240
>Z68221-4|CAJ30234.1| 488|Caenorhabditis elegans Hypothetical
protein W09C2.1a protein.
Length = 488
Score = 25.4 bits (53), Expect = 7.9
Identities = 14/43 (32%), Positives = 20/43 (46%)
Frame = +1
Query: 136 ASLSAPGSKRSALSASDAECFSLCLGAGPLWWS*CPCSRLCTA 264
A+ S+ G+ S S D EC + + PLW + LC A
Sbjct: 270 ANRSSGGANNSQFSTEDRECVNCGVHNTPLWRRDGSGNYLCNA 312
>Z66563-2|CAA91469.3| 2557|Caenorhabditis elegans Hypothetical protein
F46C3.3 protein.
Length = 2557
Score = 25.4 bits (53), Expect = 7.9
Identities = 13/42 (30%), Positives = 18/42 (42%)
Frame = -3
Query: 257 QSREQGHQDHHRGPAPRHSEKHSASEADRAERLLPGALRDAP 132
QSR + H HR P E++ A + + L P R P
Sbjct: 1499 QSRHRTHDRSHRHHVPSGVERYMAKRSPSVDILKPPMSRRTP 1540
>Z49131-6|CAA88979.1| 297|Caenorhabditis elegans Hypothetical
protein ZC373.7 protein.
Length = 297
Score = 25.4 bits (53), Expect = 7.9
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = -2
Query: 288 AAPPVTPPGGAEP*AGTSGPPQRPG 214
A P P G A P AG GP RPG
Sbjct: 150 APGPAGPAGSAGP-AGPKGPDGRPG 173
>X57834-1|CAA40967.1| 416|Caenorhabditis elegans elt-1 protein.
Length = 416
Score = 25.4 bits (53), Expect = 7.9
Identities = 14/43 (32%), Positives = 20/43 (46%)
Frame = +1
Query: 136 ASLSAPGSKRSALSASDAECFSLCLGAGPLWWS*CPCSRLCTA 264
A+ S+ G+ S S D EC + + PLW + LC A
Sbjct: 198 ANRSSGGANNSQFSTEDRECVNCGVHNTPLWRRDGSGNYLCNA 240
>U80451-8|AAB37842.2| 288|Caenorhabditis elegans Collagen protein
20 protein.
Length = 288
Score = 25.4 bits (53), Expect = 7.9
Identities = 15/32 (46%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
Frame = -2
Query: 306 AGVAGLAAPPVTPPGGAEP-*AGTSGPPQRPG 214
AG G PP P G EP AG GP PG
Sbjct: 152 AGGPGPKGPPGPPGGHGEPGPAGRGGPRGPPG 183
>U61948-2|AAB03143.2| 345|Caenorhabditis elegans Collagen protein
14 protein.
Length = 345
Score = 25.4 bits (53), Expect = 7.9
Identities = 13/31 (41%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Frame = -2
Query: 303 GVAGLAAPP-VTPPGGAEP*AGTSGPPQRPG 214
G G A PP GG + +G GPP +PG
Sbjct: 283 GQPGPAGPPGENGKGGGQGPSGLPGPPGQPG 313
>U39850-2|AAA81056.1| 451|Caenorhabditis elegans Hypothetical
protein F52C9.7 protein.
Length = 451
Score = 25.4 bits (53), Expect = 7.9
Identities = 14/58 (24%), Positives = 27/58 (46%)
Frame = -1
Query: 283 PAGHPSGRCRAVSRDIRTTTEARRPGTARNTRRPKPTELSACCRERSETPRHRNKPSR 110
P+ P R R+ R+ + + R + + +R+P + + R R + + KPSR
Sbjct: 166 PSEKPRKRSRSPRRERPRSPKRSREESRKLSRKPSSSRSKSPRRSREDPRKVARKPSR 223
>M25480-1|AAA27986.1| 326|Caenorhabditis elegans collagen protein.
Length = 326
Score = 25.4 bits (53), Expect = 7.9
Identities = 13/31 (41%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Frame = -2
Query: 303 GVAGLAAPP-VTPPGGAEP*AGTSGPPQRPG 214
G G A PP GG + +G GPP +PG
Sbjct: 264 GQPGPAGPPGENGKGGGQGPSGLPGPPGQPG 294
>DQ641631-1|ABG29106.1| 451|Caenorhabditis elegans sex determining
protein MOG-3 protein.
Length = 451
Score = 25.4 bits (53), Expect = 7.9
Identities = 14/58 (24%), Positives = 27/58 (46%)
Frame = -1
Query: 283 PAGHPSGRCRAVSRDIRTTTEARRPGTARNTRRPKPTELSACCRERSETPRHRNKPSR 110
P+ P R R+ R+ + + R + + +R+P + + R R + + KPSR
Sbjct: 166 PSEKPRKRSRSPRRERPRSPKRSREESRKLSRKPSSSRSKSPRRSREDPRKVARKPSR 223
>AL132898-12|CAB60942.1| 173|Caenorhabditis elegans Hypothetical
protein Y59A8B.24 protein.
Length = 173
Score = 25.4 bits (53), Expect = 7.9
Identities = 24/76 (31%), Positives = 34/76 (44%), Gaps = 3/76 (3%)
Frame = -1
Query: 304 RGSGAXSPAGHPSGRCRAVSRDIRTTTEARRPGTARN-TRRPK--PTELSACCRERSETP 134
+G A +P + +GR A RD R EA R +RR P +SAC + +
Sbjct: 29 KGESALAP--NITGREAAAGRD-REGKEAERTEEMEELSRRASALPRVMSACPIDLWKVD 85
Query: 133 RHRNKPSRPVWSRRSP 86
RH N+ S +W P
Sbjct: 86 RHVNQRSFKLWLTVKP 101
>AF047661-4|AAC04435.2| 931|Caenorhabditis elegans Hypothetical
protein M70.1 protein.
Length = 931
Score = 25.4 bits (53), Expect = 7.9
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -3
Query: 197 KHSASEADRAERLLPGALRD 138
KHSASEA R E+L+ + D
Sbjct: 376 KHSASEAARLEKLIENSRND 395
>AF040642-7|AAB94952.1| 329|Caenorhabditis elegans Collagen protein
68 protein.
Length = 329
Score = 25.4 bits (53), Expect = 7.9
Identities = 14/32 (43%), Positives = 16/32 (50%), Gaps = 2/32 (6%)
Frame = -2
Query: 303 GVAGLAAPPVTP--PGGAEP*AGTSGPPQRPG 214
G G PP P PG ++P G GPP PG
Sbjct: 262 GPPGPIGPPGQPGAPGSSQP--GPQGPPGDPG 291
>AF022985-12|AAB69959.1| 319|Caenorhabditis elegans Collagen
protein 143 protein.
Length = 319
Score = 25.4 bits (53), Expect = 7.9
Identities = 12/38 (31%), Positives = 17/38 (44%)
Frame = -2
Query: 246 AGTSGPPQRPGAQAQRETLGVRSRQS*ALAAGSAQRRP 133
AG GPP +PGA+ + G+ + A RP
Sbjct: 91 AGPPGPPGQPGARGEAGLPGIAGQPGSGARINPATGRP 128
>AF002196-3|AAP68957.1| 916|Caenorhabditis elegans Hypothetical
protein C09D4.4c protein.
Length = 916
Score = 25.4 bits (53), Expect = 7.9
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +1
Query: 34 QQLNCSSSISKYYNGNGVDSVETKQVEKVYSGDG 135
+ L+CS S+S+ +G TK +++ S DG
Sbjct: 423 KSLDCSQSLSRKLDGGVTSRSRTKTLKETTSTDG 456
>AF002196-1|AAP68955.1| 913|Caenorhabditis elegans Hypothetical
protein C09D4.4a protein.
Length = 913
Score = 25.4 bits (53), Expect = 7.9
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +1
Query: 34 QQLNCSSSISKYYNGNGVDSVETKQVEKVYSGDG 135
+ L+CS S+S+ +G TK +++ S DG
Sbjct: 420 KSLDCSQSLSRKLDGGVTSRSRTKTLKETTSTDG 453
>AC084153-16|AAK84590.1| 233|Caenorhabditis elegans Hypothetical
protein Y22D7AL.16 protein.
Length = 233
Score = 25.4 bits (53), Expect = 7.9
Identities = 12/44 (27%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = -1
Query: 256 RAVSRDIRTTTEARRPGTAR--NTRRPKPTELSACCRERSETPR 131
R +D + ++ R + R N ++P+P + R+RS TP+
Sbjct: 8 RRTKKDYKKRSKQNRERSRRYSNCKKPQPLNKPSPVRDRSRTPK 51
>AC025721-11|AAK29900.1| 78|Caenorhabditis elegans Hypothetical
protein Y48G8AL.12 protein.
Length = 78
Score = 25.4 bits (53), Expect = 7.9
Identities = 10/24 (41%), Positives = 11/24 (45%)
Frame = +2
Query: 224 CGGPDVPAHGSAPPGGVTGGAASP 295
CG P P + PP GG A P
Sbjct: 31 CGAPPPPPACAPPPAPACGGGAPP 54
>AC024744-1|AAL00859.1| 685|Caenorhabditis elegans Hypothetical
protein Y108G3AL.3 protein.
Length = 685
Score = 25.4 bits (53), Expect = 7.9
Identities = 12/35 (34%), Positives = 15/35 (42%)
Frame = -1
Query: 193 TRRPKPTELSACCRERSETPRHRNKPSRPVWSRRS 89
TR P R++TP +NK RP R S
Sbjct: 496 TRPPSRKAAGGSHEPRAKTPNQKNKDERPTTRRSS 530
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,509,028
Number of Sequences: 27780
Number of extensions: 166449
Number of successful extensions: 1444
Number of sequences better than 10.0: 157
Number of HSP's better than 10.0 without gapping: 909
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1406
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 323034540
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -