Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt4o06
(474 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X63527-1|CAA45090.1| 196|Homo sapiens ribosomal protein L19 pro... 217 2e-56
S56985-1|AAB25672.1| 196|Homo sapiens ribosomal protein L19 pro... 217 2e-56
BX537435-1|CAD97677.1| 205|Homo sapiens hypothetical protein pr... 217 2e-56
BC095445-1|AAH95445.1| 196|Homo sapiens ribosomal protein L19 p... 217 2e-56
BC066315-1|AAH66315.1| 196|Homo sapiens ribosomal protein L19 p... 217 2e-56
BC062709-1|AAH62709.1| 196|Homo sapiens ribosomal protein L19 p... 217 2e-56
BC013016-1|AAH13016.1| 196|Homo sapiens ribosomal protein L19 p... 217 2e-56
BC000530-1|AAH00530.1| 196|Homo sapiens ribosomal protein L19 p... 217 2e-56
AK223082-1|BAD96802.1| 196|Homo sapiens ribosomal protein L19 v... 217 2e-56
AY157980-1|AAN76335.1| 173|Homo sapiens ribosomal protein L19 p... 186 3e-47
>X63527-1|CAA45090.1| 196|Homo sapiens ribosomal protein L19
protein.
Length = 196
Score = 217 bits (530), Expect = 2e-56
Identities = 100/144 (69%), Positives = 114/144 (79%)
Frame = +2
Query: 38 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 217
MS L+LQKRLA+SV+RCGKKKVWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSR
Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60
Query: 218 ARVRKXTEARXKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLY 397
AR RK T AR KGRH G GKR+GTANARMP+K W +KKIDRH+Y
Sbjct: 61 ARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMY 120
Query: 398 HSLYMKAKGNVFKNKRVLMEYIHR 469
HSLY+K KGNVFKNKR+LME+IH+
Sbjct: 121 HSLYLKVKGNVFKNKRILMEHIHK 144
>S56985-1|AAB25672.1| 196|Homo sapiens ribosomal protein L19
protein.
Length = 196
Score = 217 bits (530), Expect = 2e-56
Identities = 100/144 (69%), Positives = 114/144 (79%)
Frame = +2
Query: 38 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 217
MS L+LQKRLA+SV+RCGKKKVWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSR
Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60
Query: 218 ARVRKXTEARXKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLY 397
AR RK T AR KGRH G GKR+GTANARMP+K W +KKIDRH+Y
Sbjct: 61 ARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMY 120
Query: 398 HSLYMKAKGNVFKNKRVLMEYIHR 469
HSLY+K KGNVFKNKR+LME+IH+
Sbjct: 121 HSLYLKVKGNVFKNKRILMEHIHK 144
>BX537435-1|CAD97677.1| 205|Homo sapiens hypothetical protein
protein.
Length = 205
Score = 217 bits (530), Expect = 2e-56
Identities = 100/144 (69%), Positives = 114/144 (79%)
Frame = +2
Query: 38 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 217
MS L+LQKRLA+SV+RCGKKKVWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSR
Sbjct: 10 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 69
Query: 218 ARVRKXTEARXKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLY 397
AR RK T AR KGRH G GKR+GTANARMP+K W +KKIDRH+Y
Sbjct: 70 ARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMY 129
Query: 398 HSLYMKAKGNVFKNKRVLMEYIHR 469
HSLY+K KGNVFKNKR+LME+IH+
Sbjct: 130 HSLYLKVKGNVFKNKRILMEHIHK 153
>BC095445-1|AAH95445.1| 196|Homo sapiens ribosomal protein L19
protein.
Length = 196
Score = 217 bits (530), Expect = 2e-56
Identities = 100/144 (69%), Positives = 114/144 (79%)
Frame = +2
Query: 38 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 217
MS L+LQKRLA+SV+RCGKKKVWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSR
Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60
Query: 218 ARVRKXTEARXKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLY 397
AR RK T AR KGRH G GKR+GTANARMP+K W +KKIDRH+Y
Sbjct: 61 ARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMY 120
Query: 398 HSLYMKAKGNVFKNKRVLMEYIHR 469
HSLY+K KGNVFKNKR+LME+IH+
Sbjct: 121 HSLYLKVKGNVFKNKRILMEHIHK 144
>BC066315-1|AAH66315.1| 196|Homo sapiens ribosomal protein L19
protein.
Length = 196
Score = 217 bits (530), Expect = 2e-56
Identities = 100/144 (69%), Positives = 114/144 (79%)
Frame = +2
Query: 38 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 217
MS L+LQKRLA+SV+RCGKKKVWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSR
Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60
Query: 218 ARVRKXTEARXKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLY 397
AR RK T AR KGRH G GKR+GTANARMP+K W +KKIDRH+Y
Sbjct: 61 ARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMY 120
Query: 398 HSLYMKAKGNVFKNKRVLMEYIHR 469
HSLY+K KGNVFKNKR+LME+IH+
Sbjct: 121 HSLYLKVKGNVFKNKRILMEHIHK 144
>BC062709-1|AAH62709.1| 196|Homo sapiens ribosomal protein L19
protein.
Length = 196
Score = 217 bits (530), Expect = 2e-56
Identities = 100/144 (69%), Positives = 114/144 (79%)
Frame = +2
Query: 38 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 217
MS L+LQKRLA+SV+RCGKKKVWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSR
Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60
Query: 218 ARVRKXTEARXKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLY 397
AR RK T AR KGRH G GKR+GTANARMP+K W +KKIDRH+Y
Sbjct: 61 ARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMY 120
Query: 398 HSLYMKAKGNVFKNKRVLMEYIHR 469
HSLY+K KGNVFKNKR+LME+IH+
Sbjct: 121 HSLYLKVKGNVFKNKRILMEHIHK 144
>BC013016-1|AAH13016.1| 196|Homo sapiens ribosomal protein L19
protein.
Length = 196
Score = 217 bits (530), Expect = 2e-56
Identities = 100/144 (69%), Positives = 114/144 (79%)
Frame = +2
Query: 38 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 217
MS L+LQKRLA+SV+RCGKKKVWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSR
Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60
Query: 218 ARVRKXTEARXKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLY 397
AR RK T AR KGRH G GKR+GTANARMP+K W +KKIDRH+Y
Sbjct: 61 ARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMY 120
Query: 398 HSLYMKAKGNVFKNKRVLMEYIHR 469
HSLY+K KGNVFKNKR+LME+IH+
Sbjct: 121 HSLYLKVKGNVFKNKRILMEHIHK 144
>BC000530-1|AAH00530.1| 196|Homo sapiens ribosomal protein L19
protein.
Length = 196
Score = 217 bits (530), Expect = 2e-56
Identities = 100/144 (69%), Positives = 114/144 (79%)
Frame = +2
Query: 38 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 217
MS L+LQKRLA+SV+RCGKKKVWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSR
Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60
Query: 218 ARVRKXTEARXKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLY 397
AR RK T AR KGRH G GKR+GTANARMP+K W +KKIDRH+Y
Sbjct: 61 ARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMY 120
Query: 398 HSLYMKAKGNVFKNKRVLMEYIHR 469
HSLY+K KGNVFKNKR+LME+IH+
Sbjct: 121 HSLYLKVKGNVFKNKRILMEHIHK 144
>AK223082-1|BAD96802.1| 196|Homo sapiens ribosomal protein L19
variant protein.
Length = 196
Score = 217 bits (530), Expect = 2e-56
Identities = 100/144 (69%), Positives = 114/144 (79%)
Frame = +2
Query: 38 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 217
MS L+LQKRLA+SV+RCGKKKVWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSR
Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60
Query: 218 ARVRKXTEARXKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLY 397
AR RK T AR KGRH G GKR+GTANARMP+K W +KKIDRH+Y
Sbjct: 61 ARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMY 120
Query: 398 HSLYMKAKGNVFKNKRVLMEYIHR 469
HSLY+K KGNVFKNKR+LME+IH+
Sbjct: 121 HSLYLKVKGNVFKNKRILMEHIHK 144
>AY157980-1|AAN76335.1| 173|Homo sapiens ribosomal protein L19
protein.
Length = 173
Score = 186 bits (453), Expect = 3e-47
Identities = 85/125 (68%), Positives = 96/125 (76%)
Frame = +2
Query: 95 KKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKXTEARXKGRHCGFG 274
KKVWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSRAR RK T AR KGRH G G
Sbjct: 1 KKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSRARCRKNTLARRKGRHMGIG 60
Query: 275 KRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFKNKRVLM 454
KR+GTANARMP+K W +KKIDRH+YHSLY+K KGNVFKNKR+LM
Sbjct: 61 KRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMYHSLYLKVKGNVFKNKRILM 120
Query: 455 EYIHR 469
E+IH+
Sbjct: 121 EHIHK 125
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,863,374
Number of Sequences: 237096
Number of extensions: 1703974
Number of successful extensions: 3210
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3087
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3200
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4156838854
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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