Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt4o04
(691 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC109061-1|AAI09062.1| 550|Homo sapiens DET1 protein protein. 192 8e-49
BC109060-1|AAI09061.1| 550|Homo sapiens DET1 protein protein. 192 8e-49
BX649632-1|CAI18774.1| 334|Homo sapiens WD repeat domain 5 prot... 35 0.31
BC001635-1|AAH01635.1| 334|Homo sapiens WD repeat domain 5 prot... 35 0.31
AK000552-1|BAA91248.1| 334|Homo sapiens protein ( Homo sapiens ... 35 0.31
AJ011376-1|CAB66159.1| 362|Homo sapiens hypothetical protein pr... 35 0.31
CR457279-1|CAG33560.1| 330|Homo sapiens WDR5B protein. 33 0.73
BC043494-1|AAH43494.1| 330|Homo sapiens WD repeat domain 5B pro... 33 0.73
AK002149-1|BAA92110.1| 330|Homo sapiens protein ( Homo sapiens ... 33 0.73
BC112930-1|AAI12931.1| 682|Homo sapiens KIAA1529 protein protein. 32 2.2
AL512590-2|CAH71603.1| 1646|Homo sapiens KIAA1529 protein. 32 2.2
AB040962-1|BAA96053.1| 1680|Homo sapiens KIAA1529 protein protein. 32 2.2
AB023190-1|BAA76817.1| 1583|Homo sapiens KIAA0973 protein protein. 30 6.8
>BC109061-1|AAI09062.1| 550|Homo sapiens DET1 protein protein.
Length = 550
Score = 192 bits (469), Expect = 8e-49
Identities = 100/190 (52%), Positives = 128/190 (67%), Gaps = 1/190 (0%)
Frame = +3
Query: 123 IVPRKIKPQNIVIRLMEREIHGSRKPGSHFHVVREFYQNVFPNLTIVNVEKPPCFLRKFS 302
I PR+I+ QN++ RL R I S K G+H+H VR F+QNVFPN T+VNVEKPPCFLRKFS
Sbjct: 8 IKPRRIQNQNVIHRLERRRI-SSGKAGTHWHQVRVFHQNVFPNFTVVNVEKPPCFLRKFS 66
Query: 303 PDGKHFIAFSADQTSLEIYEYRGASSAGDLVAGYPTDLLNADADAHH-RIRTHIFYRFFK 479
PDG++FIAFS+DQTSLEIYEY+G +A DL+ GY ++L+ D IR +F RFF
Sbjct: 67 PDGRYFIAFSSDQTSLEIYEYQGCQAAEDLLQGYEGEILSNGNDQRSVNIRGRLFERFFV 126
Query: 480 PKFTVNVCQQRDIRSDRLGNMPVMEQQLNRECSLFTEDGRYVIVGSAAHIPDDLRPHFYH 659
NV + LNRECSLFT+D R VIVGSAA++PD+ P F+
Sbjct: 127 LLHITNVAANGE--------------HLNRECSLFTDDCRCVIVGSAAYLPDEPHPPFFE 172
Query: 660 IHSNNEAVTP 689
++ N+E+VTP
Sbjct: 173 VYRNSESVTP 182
>BC109060-1|AAI09061.1| 550|Homo sapiens DET1 protein protein.
Length = 550
Score = 192 bits (469), Expect = 8e-49
Identities = 100/190 (52%), Positives = 128/190 (67%), Gaps = 1/190 (0%)
Frame = +3
Query: 123 IVPRKIKPQNIVIRLMEREIHGSRKPGSHFHVVREFYQNVFPNLTIVNVEKPPCFLRKFS 302
I PR+I+ QN++ RL R I S K G+H+H VR F+QNVFPN T+VNVEKPPCFLRKFS
Sbjct: 8 IKPRRIQNQNVIHRLERRRI-SSGKAGTHWHQVRVFHQNVFPNFTVVNVEKPPCFLRKFS 66
Query: 303 PDGKHFIAFSADQTSLEIYEYRGASSAGDLVAGYPTDLLNADADAHH-RIRTHIFYRFFK 479
PDG++FIAFS+DQTSLEIYEY+G +A DL+ GY ++L+ D IR +F RFF
Sbjct: 67 PDGRYFIAFSSDQTSLEIYEYQGCQAAEDLLQGYEGEILSNGNDQRSVNIRGRLFERFFV 126
Query: 480 PKFTVNVCQQRDIRSDRLGNMPVMEQQLNRECSLFTEDGRYVIVGSAAHIPDDLRPHFYH 659
NV + LNRECSLFT+D R VIVGSAA++PD+ P F+
Sbjct: 127 LLHITNVAANGE--------------HLNRECSLFTDDCRCVIVGSAAYLPDEPHPPFFE 172
Query: 660 IHSNNEAVTP 689
++ N+E+VTP
Sbjct: 173 VYRNSESVTP 182
>BX649632-1|CAI18774.1| 334|Homo sapiens WD repeat domain 5
protein.
Length = 334
Score = 34.7 bits (76), Expect = 0.31
Identities = 14/37 (37%), Positives = 26/37 (70%)
Frame = +3
Query: 255 TIVNVEKPPCFLRKFSPDGKHFIAFSADQTSLEIYEY 365
T+++ + PP KFSP+GK+ +A + D T L++++Y
Sbjct: 208 TLIDDDNPPVSFVKFSPNGKYILAATLDNT-LKLWDY 243
>BC001635-1|AAH01635.1| 334|Homo sapiens WD repeat domain 5
protein.
Length = 334
Score = 34.7 bits (76), Expect = 0.31
Identities = 14/37 (37%), Positives = 26/37 (70%)
Frame = +3
Query: 255 TIVNVEKPPCFLRKFSPDGKHFIAFSADQTSLEIYEY 365
T+++ + PP KFSP+GK+ +A + D T L++++Y
Sbjct: 208 TLIDDDNPPVSFVKFSPNGKYILAATLDNT-LKLWDY 243
>AK000552-1|BAA91248.1| 334|Homo sapiens protein ( Homo sapiens
cDNA FLJ20545 fis, clone KAT11476. ).
Length = 334
Score = 34.7 bits (76), Expect = 0.31
Identities = 14/37 (37%), Positives = 26/37 (70%)
Frame = +3
Query: 255 TIVNVEKPPCFLRKFSPDGKHFIAFSADQTSLEIYEY 365
T+++ + PP KFSP+GK+ +A + D T L++++Y
Sbjct: 208 TLIDDDNPPVSFVKFSPNGKYILAATLDNT-LKLWDY 243
>AJ011376-1|CAB66159.1| 362|Homo sapiens hypothetical protein
protein.
Length = 362
Score = 34.7 bits (76), Expect = 0.31
Identities = 14/37 (37%), Positives = 26/37 (70%)
Frame = +3
Query: 255 TIVNVEKPPCFLRKFSPDGKHFIAFSADQTSLEIYEY 365
T+++ + PP KFSP+GK+ +A + D T L++++Y
Sbjct: 236 TLIDDDNPPVSFVKFSPNGKYILAATLDNT-LKLWDY 271
>CR457279-1|CAG33560.1| 330|Homo sapiens WDR5B protein.
Length = 330
Score = 33.5 bits (73), Expect = 0.73
Identities = 14/37 (37%), Positives = 25/37 (67%)
Frame = +3
Query: 255 TIVNVEKPPCFLRKFSPDGKHFIAFSADQTSLEIYEY 365
T+V+ + PP KFSP+GK+ + + D T L++++Y
Sbjct: 204 TLVDDDNPPVSFVKFSPNGKYILTATLDNT-LKLWDY 239
>BC043494-1|AAH43494.1| 330|Homo sapiens WD repeat domain 5B
protein.
Length = 330
Score = 33.5 bits (73), Expect = 0.73
Identities = 14/37 (37%), Positives = 25/37 (67%)
Frame = +3
Query: 255 TIVNVEKPPCFLRKFSPDGKHFIAFSADQTSLEIYEY 365
T+V+ + PP KFSP+GK+ + + D T L++++Y
Sbjct: 204 TLVDDDNPPVSFVKFSPNGKYILTATLDNT-LKLWDY 239
>AK002149-1|BAA92110.1| 330|Homo sapiens protein ( Homo sapiens
cDNA FLJ11287 fis, clone PLACE1009596, weakly similar to
VEGETATIBLE INCOMPATIBILITY PROTEIN HET-E-1. ).
Length = 330
Score = 33.5 bits (73), Expect = 0.73
Identities = 14/37 (37%), Positives = 25/37 (67%)
Frame = +3
Query: 255 TIVNVEKPPCFLRKFSPDGKHFIAFSADQTSLEIYEY 365
T+V+ + PP KFSP+GK+ + + D T L++++Y
Sbjct: 204 TLVDDDNPPVSFVKFSPNGKYILTATLDNT-LKLWDY 239
>BC112930-1|AAI12931.1| 682|Homo sapiens KIAA1529 protein protein.
Length = 682
Score = 31.9 bits (69), Expect = 2.2
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = -3
Query: 560 LLLHHRHVTKTIRSDISLLTNIHCKLRLKESIKYMCSN-SVMSISIC 423
L + H H+ + S +L H + +L++S KY C N S S+ IC
Sbjct: 92 LYMDHYHINPVLVSFCHILITNHREKKLQQSTKYWCLNQSAESLRIC 138
>AL512590-2|CAH71603.1| 1646|Homo sapiens KIAA1529 protein.
Length = 1646
Score = 31.9 bits (69), Expect = 2.2
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = -3
Query: 560 LLLHHRHVTKTIRSDISLLTNIHCKLRLKESIKYMCSN-SVMSISIC 423
L + H H+ + S +L H + +L++S KY C N S S+ IC
Sbjct: 92 LYMDHYHINPVLVSFCHILITNHREKKLQQSTKYWCLNQSAESLRIC 138
>AB040962-1|BAA96053.1| 1680|Homo sapiens KIAA1529 protein protein.
Length = 1680
Score = 31.9 bits (69), Expect = 2.2
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = -3
Query: 560 LLLHHRHVTKTIRSDISLLTNIHCKLRLKESIKYMCSN-SVMSISIC 423
L + H H+ + S +L H + +L++S KY C N S S+ IC
Sbjct: 126 LYMDHYHINPVLVSFCHILITNHREKKLQQSTKYWCLNQSAESLRIC 172
>AB023190-1|BAA76817.1| 1583|Homo sapiens KIAA0973 protein protein.
Length = 1583
Score = 30.3 bits (65), Expect = 6.8
Identities = 26/100 (26%), Positives = 42/100 (42%), Gaps = 8/100 (8%)
Frame = +3
Query: 33 MASGSSSKFIYYEDPPPGAIDE-----KEFFCTEKIVPRKIKPQNIVIRLMEREIHGSRK 197
++S SS+ ++ P +DE K F TE I ++ +R R + R
Sbjct: 121 VSSSCSSQERLHQLPYQPTVDELHFLSKHFGSTESITDEDGGRRSPAVRPRSRSLSPGRS 180
Query: 198 PGSHFH---VVREFYQNVFPNLTIVNVEKPPCFLRKFSPD 308
P S+ + ++ Y+ FP T EK F R + PD
Sbjct: 181 PSSYDNEIVMMNHVYKERFPKATAQMEEKLRDFTRAYEPD 220
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,748,005
Number of Sequences: 237096
Number of extensions: 2052409
Number of successful extensions: 5037
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 4869
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5035
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7895240574
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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