Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt4n24
         (423 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071731-1|AAL49353.1|  109|Drosophila melanogaster RH44935p pro...    56   1e-08
AE014298-1595|AAF48031.1|  109|Drosophila melanogaster CG11752-P...    56   1e-08
AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-P...    29   3.4  

>AY071731-1|AAL49353.1|  109|Drosophila melanogaster RH44935p
           protein.
          Length = 109

 Score = 56.4 bits (130), Expect = 1e-08
 Identities = 23/34 (67%), Positives = 28/34 (82%)
 Frame = +3

Query: 243 TGAYKVPEYFCYDNVSFFEAEIEMAKYRLPQPSA 344
           TG YKVPEY+ ++  S+ EAE+EMAKYR PQPSA
Sbjct: 74  TGGYKVPEYYSFNRFSYAEAEVEMAKYRCPQPSA 107


>AE014298-1595|AAF48031.1|  109|Drosophila melanogaster CG11752-PA
           protein.
          Length = 109

 Score = 56.4 bits (130), Expect = 1e-08
 Identities = 23/34 (67%), Positives = 28/34 (82%)
 Frame = +3

Query: 243 TGAYKVPEYFCYDNVSFFEAEIEMAKYRLPQPSA 344
           TG YKVPEY+ ++  S+ EAE+EMAKYR PQPSA
Sbjct: 74  TGGYKVPEYYSFNRFSYAEAEVEMAKYRCPQPSA 107


>AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-PB
            protein.
          Length = 23015

 Score = 28.7 bits (61), Expect = 3.4
 Identities = 18/61 (29%), Positives = 25/61 (40%)
 Frame = -1

Query: 321  TSPSQFQLRRSSHYHNRNILELCTLRFFFGSTPGPTGCEAG*MTALLNPLTSGIVEFVGG 142
            T PS F  R  S     +  ++ T R F  STP P   E    +  L   T+  +   GG
Sbjct: 4363 TLPSDFTTRPHSEQTTESTRDVPTTRPFEASTPSPASLETTVPSVTLETTTNVPIGSTGG 4422

Query: 141  E 139
            +
Sbjct: 4423 Q 4423



 Score = 28.7 bits (61), Expect = 3.4
 Identities = 18/61 (29%), Positives = 25/61 (40%)
 Frame = -1

Query: 321  TSPSQFQLRRSSHYHNRNILELCTLRFFFGSTPGPTGCEAG*MTALLNPLTSGIVEFVGG 142
            T PS F  R  S     +  ++ T R F  STP P   E    +  L   T+  +   GG
Sbjct: 4975 TLPSDFTTRPHSEQTTESTRDVPTTRPFEASTPSPASLETTVPSVTLETTTNVPIGSTGG 5034

Query: 141  E 139
            +
Sbjct: 5035 Q 5035



 Score = 28.7 bits (61), Expect = 3.4
 Identities = 19/61 (31%), Positives = 25/61 (40%)
 Frame = -1

Query: 321  TSPSQFQLRRSSHYHNRNILELCTLRFFFGSTPGPTGCEAG*MTALLNPLTSGIVEFVGG 142
            T PS F  R  S     +  ++ T R F  STP P   E    +  L   TS  +   GG
Sbjct: 7362 TLPSDFTTRPHSDQTTESTRDVPTTRPFEASTPSPASLETTVPSVTLETTTSVPMGSTGG 7421

Query: 141  E 139
            +
Sbjct: 7422 Q 7422



 Score = 28.3 bits (60), Expect = 4.5
 Identities = 18/61 (29%), Positives = 25/61 (40%)
 Frame = -1

Query: 321  TSPSQFQLRRSSHYHNRNILELCTLRFFFGSTPGPTGCEAG*MTALLNPLTSGIVEFVGG 142
            T PS F  R  S     +  ++ T R F  STP P   E    +  L   T+  +   GG
Sbjct: 5179 TLPSDFTTRPHSDQTTESTRDVPTTRPFEASTPSPASLETTVPSVTLETTTNVPIGSTGG 5238

Query: 141  E 139
            +
Sbjct: 5239 Q 5239



 Score = 28.3 bits (60), Expect = 4.5
 Identities = 18/61 (29%), Positives = 25/61 (40%)
 Frame = -1

Query: 321  TSPSQFQLRRSSHYHNRNILELCTLRFFFGSTPGPTGCEAG*MTALLNPLTSGIVEFVGG 142
            T PS F  R  S     +  ++ T R F  STP P   E    +  L   T+  +   GG
Sbjct: 7566 TLPSDFTTRPHSDQTTESTRDVPTTRPFEASTPSPASLETTVPSVTLETTTNVPIGSTGG 7625

Query: 141  E 139
            +
Sbjct: 7626 Q 7626



 Score = 27.9 bits (59), Expect = 5.9
 Identities = 19/61 (31%), Positives = 25/61 (40%)
 Frame = -1

Query: 321  TSPSQFQLRRSSHYHNRNILELCTLRFFFGSTPGPTGCEAG*MTALLNPLTSGIVEFVGG 142
            T PS F  R  S     +  ++ T R F  STP P   E    +  L   TS  +   GG
Sbjct: 6371 TLPSDFTTRPHSEKTTESTRDVPTTRPFETSTPSPASLETTVPSVTLETTTSVPMGSTGG 6430

Query: 141  E 139
            +
Sbjct: 6431 Q 6431



 Score = 27.5 bits (58), Expect = 7.8
 Identities = 17/61 (27%), Positives = 25/61 (40%)
 Frame = -1

Query: 321  TSPSQFQLRRSSHYHNRNILELCTLRFFFGSTPGPTGCEAG*MTALLNPLTSGIVEFVGG 142
            T PS F +R  S     +  ++ T R F  STP P   E    +      T+  +   GG
Sbjct: 4567 TLPSDFTIRPHSEQTTESTRDVPTTRPFEASTPSPASLETTVPSVTSETTTNVPIGSTGG 4626

Query: 141  E 139
            +
Sbjct: 4627 Q 4627



 Score = 27.5 bits (58), Expect = 7.8
 Identities = 18/61 (29%), Positives = 25/61 (40%)
 Frame = -1

Query: 321  TSPSQFQLRRSSHYHNRNILELCTLRFFFGSTPGPTGCEAG*MTALLNPLTSGIVEFVGG 142
            T PS F  R  S     +  ++ T R F  STP P   E    +  L   T+  +   GG
Sbjct: 6066 TLPSDFTTRPHSEKTTESTRDVPTTRPFETSTPSPASLETTVPSVTLETTTNVPIGSTGG 6125

Query: 141  E 139
            +
Sbjct: 6126 Q 6126


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,960,660
Number of Sequences: 53049
Number of extensions: 370055
Number of successful extensions: 1047
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1000
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1047
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1292733852
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)