Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt4n10
(702 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U01335-1|AAA87053.1| 267|Drosophila melanogaster ribosomal prot... 347 7e-96
U01334-1|AAC34198.1| 267|Drosophila melanogaster ribosomal prot... 347 7e-96
AY094799-1|AAM11152.1| 267|Drosophila melanogaster LD24077p pro... 347 7e-96
AE014134-1713|AAF52822.1| 267|Drosophila melanogaster CG5920-PA... 347 7e-96
X69120-1|CAA48872.1| 267|Drosophila melanogaster ribosoaml prot... 346 2e-95
AY071397-1|AAL49019.1| 407|Drosophila melanogaster RE47909p pro... 30 2.6
AE014296-3798|ABI31280.1| 407|Drosophila melanogaster CG40049-P... 30 2.6
AE014296-3797|EAA46075.1| 407|Drosophila melanogaster CG40049-P... 30 2.6
AE014296-3796|EAA46076.2| 916|Drosophila melanogaster CG40049-P... 30 2.6
AE014296-2238|AAF49848.1| 954|Drosophila melanogaster CG11274-P... 30 2.6
>U01335-1|AAA87053.1| 267|Drosophila melanogaster ribosomal protein
S2 protein.
Length = 267
Score = 347 bits (854), Expect = 7e-96
Identities = 164/176 (93%), Positives = 169/176 (96%)
Frame = +2
Query: 173 KEDXKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 352
KED KEWVPVTKLGRLVREGKI LE IYL+SLPIKEFEIIDFFLG SL DEVLKIMPVQ
Sbjct: 37 KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQ 96
Query: 353 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNK 532
KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWGNK
Sbjct: 97 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNK 156
Query: 533 IGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGS 700
IGKPHTVPCKVTGKCGSV+VRLIPAPRGTGIVSAPVPKKLL MAG++DCYTSARGS
Sbjct: 157 IGKPHTVPCKVTGKCGSVSVRLIPAPRGTGIVSAPVPKKLLTMAGIEDCYTSARGS 212
>U01334-1|AAC34198.1| 267|Drosophila melanogaster ribosomal protein
S2 protein.
Length = 267
Score = 347 bits (854), Expect = 7e-96
Identities = 164/176 (93%), Positives = 169/176 (96%)
Frame = +2
Query: 173 KEDXKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 352
KED KEWVPVTKLGRLVREGKI LE IYL+SLPIKEFEIIDFFLG SL DEVLKIMPVQ
Sbjct: 37 KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQ 96
Query: 353 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNK 532
KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWGNK
Sbjct: 97 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNK 156
Query: 533 IGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGS 700
IGKPHTVPCKVTGKCGSV+VRLIPAPRGTGIVSAPVPKKLL MAG++DCYTSARGS
Sbjct: 157 IGKPHTVPCKVTGKCGSVSVRLIPAPRGTGIVSAPVPKKLLTMAGIEDCYTSARGS 212
>AY094799-1|AAM11152.1| 267|Drosophila melanogaster LD24077p
protein.
Length = 267
Score = 347 bits (854), Expect = 7e-96
Identities = 164/176 (93%), Positives = 169/176 (96%)
Frame = +2
Query: 173 KEDXKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 352
KED KEWVPVTKLGRLVREGKI LE IYL+SLPIKEFEIIDFFLG SL DEVLKIMPVQ
Sbjct: 37 KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQ 96
Query: 353 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNK 532
KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWGNK
Sbjct: 97 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNK 156
Query: 533 IGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGS 700
IGKPHTVPCKVTGKCGSV+VRLIPAPRGTGIVSAPVPKKLL MAG++DCYTSARGS
Sbjct: 157 IGKPHTVPCKVTGKCGSVSVRLIPAPRGTGIVSAPVPKKLLTMAGIEDCYTSARGS 212
>AE014134-1713|AAF52822.1| 267|Drosophila melanogaster CG5920-PA
protein.
Length = 267
Score = 347 bits (854), Expect = 7e-96
Identities = 164/176 (93%), Positives = 169/176 (96%)
Frame = +2
Query: 173 KEDXKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 352
KED KEWVPVTKLGRLVREGKI LE IYL+SLPIKEFEIIDFFLG SL DEVLKIMPVQ
Sbjct: 37 KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQ 96
Query: 353 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNK 532
KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWGNK
Sbjct: 97 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNK 156
Query: 533 IGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGS 700
IGKPHTVPCKVTGKCGSV+VRLIPAPRGTGIVSAPVPKKLL MAG++DCYTSARGS
Sbjct: 157 IGKPHTVPCKVTGKCGSVSVRLIPAPRGTGIVSAPVPKKLLTMAGIEDCYTSARGS 212
>X69120-1|CAA48872.1| 267|Drosophila melanogaster ribosoaml protein
S2 protein.
Length = 267
Score = 346 bits (851), Expect = 2e-95
Identities = 163/176 (92%), Positives = 169/176 (96%)
Frame = +2
Query: 173 KEDXKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 352
KED KEWVPVTKLGRLVREGKI LE IYL+SLPIKEFEIIDFFLG SL DEVLKIMPVQ
Sbjct: 37 KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQ 96
Query: 353 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNK 532
KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWGNK
Sbjct: 97 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNK 156
Query: 533 IGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGS 700
IGKPHTVPCKVTGKCGSV+VRLIPAPRGTGIVSAPVP+KLL MAG++DCYTSARGS
Sbjct: 157 IGKPHTVPCKVTGKCGSVSVRLIPAPRGTGIVSAPVPRKLLTMAGIEDCYTSARGS 212
>AY071397-1|AAL49019.1| 407|Drosophila melanogaster RE47909p
protein.
Length = 407
Score = 30.3 bits (65), Expect = 2.6
Identities = 23/111 (20%), Positives = 44/111 (39%)
Frame = +2
Query: 368 GQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPH 547
G++ R+ G+ NG G + EV TA+R + A ++ + + +
Sbjct: 189 GRKRRYSVLSVTGNGNGLAGFATAKAPEVRTALRKSKNRAGQKLINI-------SLCENR 241
Query: 548 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGS 700
T+ G + P G G+V + + ++ G++D Y GS
Sbjct: 242 TIFHDFRTDFGKTKIFCFQKPDGYGLVCHRAIQTICKVIGIKDLYAKIEGS 292
>AE014296-3798|ABI31280.1| 407|Drosophila melanogaster CG40049-PC,
isoform C protein.
Length = 407
Score = 30.3 bits (65), Expect = 2.6
Identities = 23/111 (20%), Positives = 44/111 (39%)
Frame = +2
Query: 368 GQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPH 547
G++ R+ G+ NG G + EV TA+R + A ++ + + +
Sbjct: 189 GRKRRYSVLSVTGNGNGLAGFATAKAPEVRTALRKSKNRAGQKLINI-------SLCENR 241
Query: 548 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGS 700
T+ G + P G G+V + + ++ G++D Y GS
Sbjct: 242 TIFHDFRTDFGKTKIFCFQKPDGYGLVCHRAIQTICKVIGIKDLYAKIEGS 292
>AE014296-3797|EAA46075.1| 407|Drosophila melanogaster CG40049-PA,
isoform A protein.
Length = 407
Score = 30.3 bits (65), Expect = 2.6
Identities = 23/111 (20%), Positives = 44/111 (39%)
Frame = +2
Query: 368 GQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPH 547
G++ R+ G+ NG G + EV TA+R + A ++ + + +
Sbjct: 189 GRKRRYSVLSVTGNGNGLAGFATAKAPEVRTALRKSKNRAGQKLINI-------SLCENR 241
Query: 548 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGS 700
T+ G + P G G+V + + ++ G++D Y GS
Sbjct: 242 TIFHDFRTDFGKTKIFCFQKPDGYGLVCHRAIQTICKVIGIKDLYAKIEGS 292
>AE014296-3796|EAA46076.2| 916|Drosophila melanogaster CG40049-PB,
isoform B protein.
Length = 916
Score = 30.3 bits (65), Expect = 2.6
Identities = 23/111 (20%), Positives = 44/111 (39%)
Frame = +2
Query: 368 GQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPH 547
G++ R+ G+ NG G + EV TA+R + A ++ + + +
Sbjct: 189 GRKRRYSVLSVTGNGNGLAGFATAKAPEVRTALRKSKNRAGQKLINI-------SLCENR 241
Query: 548 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGS 700
T+ G + P G G+V + + ++ G++D Y GS
Sbjct: 242 TIFHDFRTDFGKTKIFCFQKPDGYGLVCHRAIQTICKVIGIKDLYAKIEGS 292
Score = 30.3 bits (65), Expect = 2.6
Identities = 23/111 (20%), Positives = 44/111 (39%)
Frame = +2
Query: 368 GQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPH 547
G++ R+ G+ NG G + EV TA+R + A ++ + + +
Sbjct: 466 GRKRRYSVLSVTGNGNGLAGFATAKAPEVRTALRKSKNRAGQKLINI-------SLCENR 518
Query: 548 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGS 700
T+ G + P G G+V + + ++ G++D Y GS
Sbjct: 519 TIFHDFRTDFGKTKIFCFQKPDGYGLVCHRAIQTICKVIGIKDLYAKIEGS 569
Score = 30.3 bits (65), Expect = 2.6
Identities = 23/111 (20%), Positives = 44/111 (39%)
Frame = +2
Query: 368 GQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPH 547
G++ R+ G+ NG G + EV TA+R + A ++ + + +
Sbjct: 743 GRKRRYSVLSVTGNGNGLAGFATAKAPEVRTALRKSKNRAGQKLINI-------SLCENR 795
Query: 548 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGS 700
T+ G + P G G+V + + ++ G++D Y GS
Sbjct: 796 TIFHDFRTDFGKTKIFCFQKPDGYGLVCHRAIQTICKVIGIKDLYAKIEGS 846
>AE014296-2238|AAF49848.1| 954|Drosophila melanogaster CG11274-PA
protein.
Length = 954
Score = 30.3 bits (65), Expect = 2.6
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +2
Query: 542 PHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMA 664
PH+V K G G + + L+P G G+++ + K+L + A
Sbjct: 907 PHSVAAKRNGNAGKLAL-LLPGASGAGVINEDLEKQLRERA 946
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,191,455
Number of Sequences: 53049
Number of extensions: 683982
Number of successful extensions: 2702
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1866
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2702
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3087795150
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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