Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt4n07
         (505 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC057233-1|AAH57233.1|  162|Homo sapiens keratinocyte associated...   101   1e-21
BC048205-1|AAH48205.1|  146|Homo sapiens KRTCAP2 protein protein.     101   1e-21
BC029806-1|AAH29806.1|  162|Homo sapiens keratinocyte associated...   101   1e-21
AL607067-2|CAH71196.1|  162|Homo sapiens keratinocyte associated...   101   1e-21
AY157577-1|AAO13161.2|  114|Homo sapiens keratinocytes associate...    97   3e-20

>BC057233-1|AAH57233.1|  162|Homo sapiens keratinocyte associated
           protein 2 protein.
          Length = 162

 Score =  101 bits (243), Expect = 1e-21
 Identities = 51/115 (44%), Positives = 72/115 (62%), Gaps = 3/115 (2%)
 Frame = +1

Query: 127 GMQMYKPQLILSPMTIIFGGYLGSLMFMFFVTAVGNLETILXGKXFXLKL-PEVVLSMGI 303
           GMQMY  QL  +    I GG LGS +F+F +TA  NLE ++ GK F  K+ PE++L + +
Sbjct: 48  GMQMYSRQLASTEWLTIQGGLLGSGLFVFSLTAFNNLENLVFGKGFQAKIFPEILLCLLL 107

Query: 304 SLIAAGMVHRICFTTCLIFCVXTIYYMNKLSQKEYAVVAP--QPAAVKSRRHK*N 462
           +L A+G++HR+C TTC IF +  +YY+NK+S   Y   AP   PA V  +  K N
Sbjct: 108 ALFASGLIHRVCVTTCFIFSMVGLYYINKISSTLYQAAAPVLTPAKVTGKSKKRN 162


>BC048205-1|AAH48205.1|  146|Homo sapiens KRTCAP2 protein protein.
          Length = 146

 Score =  101 bits (243), Expect = 1e-21
 Identities = 51/115 (44%), Positives = 72/115 (62%), Gaps = 3/115 (2%)
 Frame = +1

Query: 127 GMQMYKPQLILSPMTIIFGGYLGSLMFMFFVTAVGNLETILXGKXFXLKL-PEVVLSMGI 303
           GMQMY  QL  +    I GG LGS +F+F +TA  NLE ++ GK F  K+ PE++L + +
Sbjct: 32  GMQMYSRQLASTEWLTIQGGLLGSGLFVFSLTAFNNLENLVFGKGFQAKIFPEILLCLLL 91

Query: 304 SLIAAGMVHRICFTTCLIFCVXTIYYMNKLSQKEYAVVAP--QPAAVKSRRHK*N 462
           +L A+G++HR+C TTC IF +  +YY+NK+S   Y   AP   PA V  +  K N
Sbjct: 92  ALFASGLIHRVCVTTCFIFSMVGLYYINKISSTLYQAAAPVLTPAKVTGKSKKRN 146


>BC029806-1|AAH29806.1|  162|Homo sapiens keratinocyte associated
           protein 2 protein.
          Length = 162

 Score =  101 bits (243), Expect = 1e-21
 Identities = 51/115 (44%), Positives = 72/115 (62%), Gaps = 3/115 (2%)
 Frame = +1

Query: 127 GMQMYKPQLILSPMTIIFGGYLGSLMFMFFVTAVGNLETILXGKXFXLKL-PEVVLSMGI 303
           GMQMY  QL  +    I GG LGS +F+F +TA  NLE ++ GK F  K+ PE++L + +
Sbjct: 48  GMQMYSRQLASTEWLTIQGGLLGSGLFVFSLTAFNNLENLVFGKGFQAKIFPEILLCLLL 107

Query: 304 SLIAAGMVHRICFTTCLIFCVXTIYYMNKLSQKEYAVVAP--QPAAVKSRRHK*N 462
           +L A+G++HR+C TTC IF +  +YY+NK+S   Y   AP   PA V  +  K N
Sbjct: 108 ALFASGLIHRVCVTTCFIFSMVGLYYINKISSTLYQAAAPVLTPAKVTGKSKKRN 162


>AL607067-2|CAH71196.1|  162|Homo sapiens keratinocyte associated
           protein 2 protein.
          Length = 162

 Score =  101 bits (243), Expect = 1e-21
 Identities = 51/115 (44%), Positives = 72/115 (62%), Gaps = 3/115 (2%)
 Frame = +1

Query: 127 GMQMYKPQLILSPMTIIFGGYLGSLMFMFFVTAVGNLETILXGKXFXLKL-PEVVLSMGI 303
           GMQMY  QL  +    I GG LGS +F+F +TA  NLE ++ GK F  K+ PE++L + +
Sbjct: 48  GMQMYSRQLASTEWLTIQGGLLGSGLFVFSLTAFNNLENLVFGKGFQAKIFPEILLCLLL 107

Query: 304 SLIAAGMVHRICFTTCLIFCVXTIYYMNKLSQKEYAVVAP--QPAAVKSRRHK*N 462
           +L A+G++HR+C TTC IF +  +YY+NK+S   Y   AP   PA V  +  K N
Sbjct: 108 ALFASGLIHRVCVTTCFIFSMVGLYYINKISSTLYQAAAPVLTPAKVTGKSKKRN 162


>AY157577-1|AAO13161.2|  114|Homo sapiens keratinocytes associated
           protein 2 protein.
          Length = 114

 Score = 97.1 bits (231), Expect = 3e-20
 Identities = 49/114 (42%), Positives = 70/114 (61%), Gaps = 3/114 (2%)
 Frame = +1

Query: 130 MQMYKPQLILSPMTIIFGGYLGSLMFMFFVTAVGNLETILXGKXFXLKL-PEVVLSMGIS 306
           MQMY  QL  +    I GG LGS +F+F +TA  NLE ++ GK F  K+ PE++L + ++
Sbjct: 1   MQMYSRQLASTEWLTIQGGLLGSGLFVFSLTAFNNLENLVFGKGFQAKIFPEILLCLLLA 60

Query: 307 LIAAGMVHRICFTTCLIFCVXTIYYMNKLSQKEYAVVAP--QPAAVKSRRHK*N 462
           L A+ ++HR+C TTC IF +  +YY+NK+S   Y   AP   PA V  +  K N
Sbjct: 61  LFASSLIHRVCVTTCFIFSMVGLYYINKISSTLYQAAAPVLTPAKVTGKSKKRN 114


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 60,275,815
Number of Sequences: 237096
Number of extensions: 1021002
Number of successful extensions: 1459
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1431
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1453
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4649883964
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)