Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt4n06
         (636 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051493-1|AAK92917.1|  598|Drosophila melanogaster GH14720p pro...   176   2e-44
AE014298-2340|AAF48572.1|  598|Drosophila melanogaster CG3415-PA...   176   2e-44
AY069525-1|AAL39670.1| 1150|Drosophila melanogaster LD24034p pro...    31   1.7  
AE014296-221|AAF47472.1| 1150|Drosophila melanogaster CG2469-PB,...    31   1.7  
AE014296-220|AAN11469.1| 1150|Drosophila melanogaster CG2469-PA,...    31   1.7  

>AY051493-1|AAK92917.1|  598|Drosophila melanogaster GH14720p
           protein.
          Length = 598

 Score =  176 bits (428), Expect = 2e-44
 Identities = 90/216 (41%), Positives = 139/216 (64%), Gaps = 4/216 (1%)
 Frame = +1

Query: 1   DSTLGFATKAQLFRSNGAPLKKRPSDPVTIESVKENWSKVVDMRGAKHLEKIADVTLELV 180
           +S  G+ATK  + R  GA L+    DPVTIE VK+ WS V DM  AKHL  IA+ +  L+
Sbjct: 241 ESAAGWATKLHMVRGKGAVLRPSLDDPVTIEYVKDVWSNVTDMSKAKHLGAIAEASGTLL 300

Query: 181 DKLQEFEERSKLDGDKDSYWTTYDYNAKDLVIYALGVGASVENPTDLKFLYESHENFSPL 360
           + L++ +E     G  D+    +++N+K+L+ YALG+GASV+N  D++FLYE+  +F+ +
Sbjct: 301 EVLEKLKE-----GGGDAIEDAFEFNSKELITYALGIGASVKNAKDMRFLYENDADFAAI 355

Query: 361 PSFFILAGMCMEA---PIVANAMPPGKFADFTNVLHGEQYIEFVGDFPGTEGVFTTRCYV 531
           P+FF+L G+ ++     +++ A+P  +  DF+N+LHGEQY+E V D P T G   T   V
Sbjct: 356 PTFFVLPGLLLQMSTDKLLSKALPNSQ-VDFSNILHGEQYLEIVDDLP-TSGTLLTNGKV 413

Query: 532 VDILDKGSSAVAIVNSEIF-QNKQLVCRTQQHIFVL 636
            D++DKGS AV + NSE F ++ +L+ R Q   F++
Sbjct: 414 FDVMDKGSGAVVVTNSESFDESGRLLVRNQSTTFIV 449


>AE014298-2340|AAF48572.1|  598|Drosophila melanogaster CG3415-PA
           protein.
          Length = 598

 Score =  176 bits (428), Expect = 2e-44
 Identities = 90/216 (41%), Positives = 139/216 (64%), Gaps = 4/216 (1%)
 Frame = +1

Query: 1   DSTLGFATKAQLFRSNGAPLKKRPSDPVTIESVKENWSKVVDMRGAKHLEKIADVTLELV 180
           +S  G+ATK  + R  GA L+    DPVTIE VK+ WS V DM  AKHL  IA+ +  L+
Sbjct: 241 ESAAGWATKLHMVRGKGAVLRPSLDDPVTIEYVKDVWSNVTDMSKAKHLGAIAEASGTLL 300

Query: 181 DKLQEFEERSKLDGDKDSYWTTYDYNAKDLVIYALGVGASVENPTDLKFLYESHENFSPL 360
           + L++ +E     G  D+    +++N+K+L+ YALG+GASV+N  D++FLYE+  +F+ +
Sbjct: 301 EVLEKLKE-----GGGDAIEDAFEFNSKELITYALGIGASVKNAKDMRFLYENDADFAAI 355

Query: 361 PSFFILAGMCMEA---PIVANAMPPGKFADFTNVLHGEQYIEFVGDFPGTEGVFTTRCYV 531
           P+FF+L G+ ++     +++ A+P  +  DF+N+LHGEQY+E V D P T G   T   V
Sbjct: 356 PTFFVLPGLLLQMSTDKLLSKALPNSQ-VDFSNILHGEQYLEIVDDLP-TSGTLLTNGKV 413

Query: 532 VDILDKGSSAVAIVNSEIF-QNKQLVCRTQQHIFVL 636
            D++DKGS AV + NSE F ++ +L+ R Q   F++
Sbjct: 414 FDVMDKGSGAVVVTNSESFDESGRLLVRNQSTTFIV 449


>AY069525-1|AAL39670.1| 1150|Drosophila melanogaster LD24034p protein.
          Length = 1150

 Score = 30.7 bits (66), Expect = 1.7
 Identities = 13/22 (59%), Positives = 17/22 (77%)
 Frame = -3

Query: 370  RTRVRERNSRGSRKGTSNRSGS 305
            R+R R RN  GSR G+++RSGS
Sbjct: 1013 RSRSRSRNRSGSRSGSASRSGS 1034


>AE014296-221|AAF47472.1| 1150|Drosophila melanogaster CG2469-PB,
            isoform B protein.
          Length = 1150

 Score = 30.7 bits (66), Expect = 1.7
 Identities = 13/22 (59%), Positives = 17/22 (77%)
 Frame = -3

Query: 370  RTRVRERNSRGSRKGTSNRSGS 305
            R+R R RN  GSR G+++RSGS
Sbjct: 1013 RSRSRSRNRSGSRSGSASRSGS 1034


>AE014296-220|AAN11469.1| 1150|Drosophila melanogaster CG2469-PA,
            isoform A protein.
          Length = 1150

 Score = 30.7 bits (66), Expect = 1.7
 Identities = 13/22 (59%), Positives = 17/22 (77%)
 Frame = -3

Query: 370  RTRVRERNSRGSRKGTSNRSGS 305
            R+R R RN  GSR G+++RSGS
Sbjct: 1013 RSRSRSRNRSGSRSGSASRSGS 1034


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,403,808
Number of Sequences: 53049
Number of extensions: 709142
Number of successful extensions: 2154
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2034
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2144
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2662347150
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)