Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt4m16
         (560 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT003279-1|AAO25036.1|  379|Drosophila melanogaster LD09158p pro...    46   5e-05
AE013599-826|AAF58966.2|  379|Drosophila melanogaster CG8029-PB,...    46   5e-05
AE013599-825|AAF58965.1|  379|Drosophila melanogaster CG8029-PA,...    46   5e-05
AY118400-1|AAM48429.1|  608|Drosophila melanogaster RE60058p pro...    30   2.5  
AL031863-1|CAA21315.1|  526|Drosophila melanogaster EG:EG0003.1 ...    30   2.5  
AE013599-2369|AAF57936.2|  608|Drosophila melanogaster CG8910-PA...    30   2.5  

>BT003279-1|AAO25036.1|  379|Drosophila melanogaster LD09158p
           protein.
          Length = 379

 Score = 45.6 bits (103), Expect = 5e-05
 Identities = 39/121 (32%), Positives = 50/121 (41%)
 Frame = +2

Query: 152 LFPLLVLSVASASTVPVFLWGDXXXXXXXXXXXXXXXTVSAQGFSEILNNELKDDPYVIV 331
           L  L V+  A A   PVFLWG                TVS   F+E L   L +D  V+ 
Sbjct: 6   LIALCVIGAAVAEQTPVFLWG------ANSVAKPSLKTVSQVEFAEQL-AALLEDHMVVA 58

Query: 332 FLEETLSVEDFSRKNNEGDISIPYLYDNLSDALYLPSVEDASRVLEEVAKGAVHVKLTQN 511
           F E  LS +DF   N++       L   +S   Y  SVE+ S  L  VA    H  +  +
Sbjct: 59  FEENGLSSKDFLCSNSQAQSCYAQL-QGVSPKTYYTSVENPSEALRSVAAKREHNSIDAS 117

Query: 512 G 514
           G
Sbjct: 118 G 118


>AE013599-826|AAF58966.2|  379|Drosophila melanogaster CG8029-PB,
           isoform B protein.
          Length = 379

 Score = 45.6 bits (103), Expect = 5e-05
 Identities = 39/121 (32%), Positives = 50/121 (41%)
 Frame = +2

Query: 152 LFPLLVLSVASASTVPVFLWGDXXXXXXXXXXXXXXXTVSAQGFSEILNNELKDDPYVIV 331
           L  L V+  A A   PVFLWG                TVS   F+E L   L +D  V+ 
Sbjct: 6   LIALCVIGAAVAEQTPVFLWG------ANSVAKPSLKTVSQVEFAEQL-AALLEDHMVVA 58

Query: 332 FLEETLSVEDFSRKNNEGDISIPYLYDNLSDALYLPSVEDASRVLEEVAKGAVHVKLTQN 511
           F E  LS +DF   N++       L   +S   Y  SVE+ S  L  VA    H  +  +
Sbjct: 59  FEENGLSSKDFLCSNSQAQSCYAQL-QGVSPKTYYTSVENPSEALRSVAAKREHNSIDAS 117

Query: 512 G 514
           G
Sbjct: 118 G 118


>AE013599-825|AAF58965.1|  379|Drosophila melanogaster CG8029-PA,
           isoform A protein.
          Length = 379

 Score = 45.6 bits (103), Expect = 5e-05
 Identities = 39/121 (32%), Positives = 50/121 (41%)
 Frame = +2

Query: 152 LFPLLVLSVASASTVPVFLWGDXXXXXXXXXXXXXXXTVSAQGFSEILNNELKDDPYVIV 331
           L  L V+  A A   PVFLWG                TVS   F+E L   L +D  V+ 
Sbjct: 6   LIALCVIGAAVAEQTPVFLWG------ANSVAKPSLKTVSQVEFAEQL-AALLEDHMVVA 58

Query: 332 FLEETLSVEDFSRKNNEGDISIPYLYDNLSDALYLPSVEDASRVLEEVAKGAVHVKLTQN 511
           F E  LS +DF   N++       L   +S   Y  SVE+ S  L  VA    H  +  +
Sbjct: 59  FEENGLSSKDFLCSNSQAQSCYAQL-QGVSPKTYYTSVENPSEALRSVAAKREHNSIDAS 117

Query: 512 G 514
           G
Sbjct: 118 G 118


>AY118400-1|AAM48429.1|  608|Drosophila melanogaster RE60058p
           protein.
          Length = 608

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 27/103 (26%), Positives = 41/103 (39%)
 Frame = -1

Query: 440 KASTERHLNYHTGTESKYHLRYFYVKNLRPIRFLQGILSRRGRLSAHYSKFR*TLERTPC 261
           K++  RH  +H       H R     +L  +       S     S HYSK        PC
Sbjct: 184 KSAVGRHHPHHYAARGSAHARVSQSDSLYSMSSTGSAASSASGYS-HYSKTSSISSNGPC 242

Query: 260 SMGSISGSFQSYWISRPIRTLAPSTHWPRLELATGTVNGKTPS 132
           S  S + +  S  ++ P    +P+TH     LA+ T +G + S
Sbjct: 243 SPASPAVASSSNHLAPP----SPTTHHHSHSLASPTPSGSSGS 281


>AL031863-1|CAA21315.1|  526|Drosophila melanogaster EG:EG0003.1
           protein.
          Length = 526

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 27/103 (26%), Positives = 41/103 (39%)
 Frame = -1

Query: 440 KASTERHLNYHTGTESKYHLRYFYVKNLRPIRFLQGILSRRGRLSAHYSKFR*TLERTPC 261
           K++  RH  +H       H R     +L  +       S     S HYSK        PC
Sbjct: 102 KSAVGRHHPHHYAARGSAHARVSQSDSLYSMSSTGSAASSASGYS-HYSKTSSISSNGPC 160

Query: 260 SMGSISGSFQSYWISRPIRTLAPSTHWPRLELATGTVNGKTPS 132
           S  S + +  S  ++ P    +P+TH     LA+ T +G + S
Sbjct: 161 SPASPAVASSSNHLAPP----SPTTHHHSHSLASPTPSGSSGS 199


>AE013599-2369|AAF57936.2|  608|Drosophila melanogaster CG8910-PA
           protein.
          Length = 608

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 27/103 (26%), Positives = 41/103 (39%)
 Frame = -1

Query: 440 KASTERHLNYHTGTESKYHLRYFYVKNLRPIRFLQGILSRRGRLSAHYSKFR*TLERTPC 261
           K++  RH  +H       H R     +L  +       S     S HYSK        PC
Sbjct: 184 KSAVGRHHPHHYAARGSAHARVSQSDSLYSMSSTGSAASSASGYS-HYSKTSSISSNGPC 242

Query: 260 SMGSISGSFQSYWISRPIRTLAPSTHWPRLELATGTVNGKTPS 132
           S  S + +  S  ++ P    +P+TH     LA+ T +G + S
Sbjct: 243 SPASPAVASSSNHLAPP----SPTTHHHSHSLASPTPSGSSGS 281


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,091,603
Number of Sequences: 53049
Number of extensions: 449578
Number of successful extensions: 1027
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 998
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1027
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2172596895
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)