Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt4m16
         (560 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC006801-2|AAF60751.1|  914|Caenorhabditis elegans Hypothetical ...    33   0.19 
AF022981-2|AAG24200.1|  236|Caenorhabditis elegans Hypothetical ...    29   1.7  
Z47809-8|CAH10845.1|  968|Caenorhabditis elegans Hypothetical pr...    29   3.0  
Z47809-6|CAD57700.1| 1124|Caenorhabditis elegans Hypothetical pr...    29   3.0  
Z47809-5|CAD57699.1| 1019|Caenorhabditis elegans Hypothetical pr...    29   3.0  
Z47809-4|CAA87782.1| 1016|Caenorhabditis elegans Hypothetical pr...    29   3.0  
Z36719-11|CAH04695.1|  968|Caenorhabditis elegans Hypothetical p...    29   3.0  
Z36719-10|CAD57686.1| 1124|Caenorhabditis elegans Hypothetical p...    29   3.0  
Z36719-9|CAD57685.1| 1019|Caenorhabditis elegans Hypothetical pr...    29   3.0  
Z36719-8|CAA85318.1| 1016|Caenorhabditis elegans Hypothetical pr...    29   3.0  
U86640-1|AAB47273.1| 1016|Caenorhabditis elegans MEL-11 protein.       29   3.0  
Z92811-5|CAN86600.1| 1580|Caenorhabditis elegans Hypothetical pr...    27   9.2  
Z92811-4|CAB07273.2| 1605|Caenorhabditis elegans Hypothetical pr...    27   9.2  
Z82271-8|CAN86621.1| 1580|Caenorhabditis elegans Hypothetical pr...    27   9.2  
Z82271-7|CAB05214.2| 1605|Caenorhabditis elegans Hypothetical pr...    27   9.2  
AF003386-6|AAK82897.1|  527|Caenorhabditis elegans Hypothetical ...    27   9.2  
AF003386-5|AAK82898.1|  529|Caenorhabditis elegans Hypothetical ...    27   9.2  
AF003386-2|AAB54255.1|  527|Caenorhabditis elegans Hypothetical ...    27   9.2  
AF003386-1|AAK82899.1|  529|Caenorhabditis elegans Hypothetical ...    27   9.2  
AB035591-1|BAB18763.1| 1609|Caenorhabditis elegans kinesin like ...    27   9.2  

>AC006801-2|AAF60751.1|  914|Caenorhabditis elegans Hypothetical
           protein Y52D5A.1 protein.
          Length = 914

 Score = 32.7 bits (71), Expect = 0.19
 Identities = 14/52 (26%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
 Frame = +2

Query: 293 LNNELKDDPYVIVFLEETLSVEDFSRKNNEGDISIPYLYDNLSDALY-LPSV 445
           +NN + D P + +FL+ + S+ D    N+  D+ + Y++  +S++++ LP +
Sbjct: 458 MNNSIFDLPVIYIFLKMSNSIFDLPMSNSIFDLPVIYIFLKMSNSIFDLPVI 509



 Score = 27.9 bits (59), Expect = 5.3
 Identities = 12/52 (23%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
 Frame = +2

Query: 293 LNNELKDDPYVIVFLEETLSVEDFSRKNNEGDISIPYLYDNLSDALY-LPSV 445
           ++N + D P + +FL+ + S+      N+  D+ + Y++  +S++++ LP +
Sbjct: 353 MSNSIFDLPVIYIFLKMSNSIFKLPMNNSIFDLPVIYIFLKMSNSIFDLPVI 404


>AF022981-2|AAG24200.1|  236|Caenorhabditis elegans Hypothetical
           protein W03F9.2a protein.
          Length = 236

 Score = 29.5 bits (63), Expect = 1.7
 Identities = 10/19 (52%), Positives = 15/19 (78%)
 Frame = -1

Query: 425 RHLNYHTGTESKYHLRYFY 369
           R+LN+HT  E K+HL +F+
Sbjct: 100 RNLNFHTEDEGKHHLEHFH 118


>Z47809-8|CAH10845.1|  968|Caenorhabditis elegans Hypothetical
           protein C06C3.1d protein.
          Length = 968

 Score = 28.7 bits (61), Expect = 3.0
 Identities = 17/41 (41%), Positives = 22/41 (53%)
 Frame = -3

Query: 249 DFREFPELLDKSPHKNTGTVDALATLRTSNGNSKRQNAIFV 127
           D  E  ELL+K  + NT TVD L  L  S  +SK +   F+
Sbjct: 67  DEEEVEELLNKGANINTCTVDGLTALHQSVIDSKPEMVRFL 107


>Z47809-6|CAD57700.1| 1124|Caenorhabditis elegans Hypothetical
           protein C06C3.1c protein.
          Length = 1124

 Score = 28.7 bits (61), Expect = 3.0
 Identities = 17/41 (41%), Positives = 22/41 (53%)
 Frame = -3

Query: 249 DFREFPELLDKSPHKNTGTVDALATLRTSNGNSKRQNAIFV 127
           D  E  ELL+K  + NT TVD L  L  S  +SK +   F+
Sbjct: 67  DEEEVEELLNKGANINTCTVDGLTALHQSVIDSKPEMVRFL 107


>Z47809-5|CAD57699.1| 1019|Caenorhabditis elegans Hypothetical
           protein C06C3.1b protein.
          Length = 1019

 Score = 28.7 bits (61), Expect = 3.0
 Identities = 17/41 (41%), Positives = 22/41 (53%)
 Frame = -3

Query: 249 DFREFPELLDKSPHKNTGTVDALATLRTSNGNSKRQNAIFV 127
           D  E  ELL+K  + NT TVD L  L  S  +SK +   F+
Sbjct: 67  DEEEVEELLNKGANINTCTVDGLTALHQSVIDSKPEMVRFL 107


>Z47809-4|CAA87782.1| 1016|Caenorhabditis elegans Hypothetical
           protein C06C3.1a protein.
          Length = 1016

 Score = 28.7 bits (61), Expect = 3.0
 Identities = 17/41 (41%), Positives = 22/41 (53%)
 Frame = -3

Query: 249 DFREFPELLDKSPHKNTGTVDALATLRTSNGNSKRQNAIFV 127
           D  E  ELL+K  + NT TVD L  L  S  +SK +   F+
Sbjct: 67  DEEEVEELLNKGANINTCTVDGLTALHQSVIDSKPEMVRFL 107


>Z36719-11|CAH04695.1|  968|Caenorhabditis elegans Hypothetical
           protein C06C3.1d protein.
          Length = 968

 Score = 28.7 bits (61), Expect = 3.0
 Identities = 17/41 (41%), Positives = 22/41 (53%)
 Frame = -3

Query: 249 DFREFPELLDKSPHKNTGTVDALATLRTSNGNSKRQNAIFV 127
           D  E  ELL+K  + NT TVD L  L  S  +SK +   F+
Sbjct: 67  DEEEVEELLNKGANINTCTVDGLTALHQSVIDSKPEMVRFL 107


>Z36719-10|CAD57686.1| 1124|Caenorhabditis elegans Hypothetical
           protein C06C3.1c protein.
          Length = 1124

 Score = 28.7 bits (61), Expect = 3.0
 Identities = 17/41 (41%), Positives = 22/41 (53%)
 Frame = -3

Query: 249 DFREFPELLDKSPHKNTGTVDALATLRTSNGNSKRQNAIFV 127
           D  E  ELL+K  + NT TVD L  L  S  +SK +   F+
Sbjct: 67  DEEEVEELLNKGANINTCTVDGLTALHQSVIDSKPEMVRFL 107


>Z36719-9|CAD57685.1| 1019|Caenorhabditis elegans Hypothetical
           protein C06C3.1b protein.
          Length = 1019

 Score = 28.7 bits (61), Expect = 3.0
 Identities = 17/41 (41%), Positives = 22/41 (53%)
 Frame = -3

Query: 249 DFREFPELLDKSPHKNTGTVDALATLRTSNGNSKRQNAIFV 127
           D  E  ELL+K  + NT TVD L  L  S  +SK +   F+
Sbjct: 67  DEEEVEELLNKGANINTCTVDGLTALHQSVIDSKPEMVRFL 107


>Z36719-8|CAA85318.1| 1016|Caenorhabditis elegans Hypothetical
           protein C06C3.1a protein.
          Length = 1016

 Score = 28.7 bits (61), Expect = 3.0
 Identities = 17/41 (41%), Positives = 22/41 (53%)
 Frame = -3

Query: 249 DFREFPELLDKSPHKNTGTVDALATLRTSNGNSKRQNAIFV 127
           D  E  ELL+K  + NT TVD L  L  S  +SK +   F+
Sbjct: 67  DEEEVEELLNKGANINTCTVDGLTALHQSVIDSKPEMVRFL 107


>U86640-1|AAB47273.1| 1016|Caenorhabditis elegans MEL-11 protein.
          Length = 1016

 Score = 28.7 bits (61), Expect = 3.0
 Identities = 17/41 (41%), Positives = 22/41 (53%)
 Frame = -3

Query: 249 DFREFPELLDKSPHKNTGTVDALATLRTSNGNSKRQNAIFV 127
           D  E  ELL+K  + NT TVD L  L  S  +SK +   F+
Sbjct: 67  DEEEVEELLNKGANINTCTVDGLTALHQSVIDSKPEMVRFL 107


>Z92811-5|CAN86600.1| 1580|Caenorhabditis elegans Hypothetical
           protein T01G1.1c protein.
          Length = 1580

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 17/64 (26%), Positives = 27/64 (42%)
 Frame = -3

Query: 312 SFSSLFKISLNP*ADTVLNGFDFREFPELLDKSPHKNTGTVDALATLRTSNGNSKRQNAI 133
           S SS  +I  +   + VL+G + R   ++         G ++        N  S R +AI
Sbjct: 163 SMSSSIRIHEDSRGEIVLHGVEQRSVFDMHGTMDILKNGALNRTVAATNMNEQSSRSHAI 222

Query: 132 FVLH 121
           F LH
Sbjct: 223 FTLH 226


>Z92811-4|CAB07273.2| 1605|Caenorhabditis elegans Hypothetical
           protein T01G1.1a protein.
          Length = 1605

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 17/64 (26%), Positives = 27/64 (42%)
 Frame = -3

Query: 312 SFSSLFKISLNP*ADTVLNGFDFREFPELLDKSPHKNTGTVDALATLRTSNGNSKRQNAI 133
           S SS  +I  +   + VL+G + R   ++         G ++        N  S R +AI
Sbjct: 163 SMSSSIRIHEDSRGEIVLHGVEQRSVFDMHGTMDILKNGALNRTVAATNMNEQSSRSHAI 222

Query: 132 FVLH 121
           F LH
Sbjct: 223 FTLH 226


>Z82271-8|CAN86621.1| 1580|Caenorhabditis elegans Hypothetical
           protein T01G1.1c protein.
          Length = 1580

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 17/64 (26%), Positives = 27/64 (42%)
 Frame = -3

Query: 312 SFSSLFKISLNP*ADTVLNGFDFREFPELLDKSPHKNTGTVDALATLRTSNGNSKRQNAI 133
           S SS  +I  +   + VL+G + R   ++         G ++        N  S R +AI
Sbjct: 163 SMSSSIRIHEDSRGEIVLHGVEQRSVFDMHGTMDILKNGALNRTVAATNMNEQSSRSHAI 222

Query: 132 FVLH 121
           F LH
Sbjct: 223 FTLH 226


>Z82271-7|CAB05214.2| 1605|Caenorhabditis elegans Hypothetical
           protein T01G1.1a protein.
          Length = 1605

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 17/64 (26%), Positives = 27/64 (42%)
 Frame = -3

Query: 312 SFSSLFKISLNP*ADTVLNGFDFREFPELLDKSPHKNTGTVDALATLRTSNGNSKRQNAI 133
           S SS  +I  +   + VL+G + R   ++         G ++        N  S R +AI
Sbjct: 163 SMSSSIRIHEDSRGEIVLHGVEQRSVFDMHGTMDILKNGALNRTVAATNMNEQSSRSHAI 222

Query: 132 FVLH 121
           F LH
Sbjct: 223 FTLH 226


>AF003386-6|AAK82897.1|  527|Caenorhabditis elegans Hypothetical
           protein F59E12.4a protein.
          Length = 527

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = -1

Query: 428 ERHLNYHTGTESKYHLRYFYVKNLRPIRFLQG 333
           E H  +H GT +K     F V+N + I  LQG
Sbjct: 364 EPHYTFHVGTSNKSKSAKFNVENRQAIGQLQG 395


>AF003386-5|AAK82898.1|  529|Caenorhabditis elegans Hypothetical
           protein F59E12.4b protein.
          Length = 529

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = -1

Query: 428 ERHLNYHTGTESKYHLRYFYVKNLRPIRFLQG 333
           E H  +H GT +K     F V+N + I  LQG
Sbjct: 364 EPHYTFHVGTSNKSKSAKFNVENRQAIGQLQG 395


>AF003386-2|AAB54255.1|  527|Caenorhabditis elegans Hypothetical
           protein F59E12.5a protein.
          Length = 527

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = -1

Query: 428 ERHLNYHTGTESKYHLRYFYVKNLRPIRFLQG 333
           E H  +H GT +K     F V+N + I  LQG
Sbjct: 364 EPHYTFHVGTSNKSKSAKFNVENRQAIGQLQG 395


>AF003386-1|AAK82899.1|  529|Caenorhabditis elegans Hypothetical
           protein F59E12.5b protein.
          Length = 529

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = -1

Query: 428 ERHLNYHTGTESKYHLRYFYVKNLRPIRFLQG 333
           E H  +H GT +K     F V+N + I  LQG
Sbjct: 364 EPHYTFHVGTSNKSKSAKFNVENRQAIGQLQG 395


>AB035591-1|BAB18763.1| 1609|Caenorhabditis elegans kinesin like
           protein KLP-12 protein.
          Length = 1609

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 17/64 (26%), Positives = 27/64 (42%)
 Frame = -3

Query: 312 SFSSLFKISLNP*ADTVLNGFDFREFPELLDKSPHKNTGTVDALATLRTSNGNSKRQNAI 133
           S SS  +I  +   + VL+G + R   ++         G ++        N  S R +AI
Sbjct: 167 SMSSSIRIHEDSRGEIVLHGVEQRSVFDMHGTMDILKNGALNRTVAATNMNEQSSRSHAI 226

Query: 132 FVLH 121
           F LH
Sbjct: 227 FTLH 230


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,148,998
Number of Sequences: 27780
Number of extensions: 238917
Number of successful extensions: 642
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 615
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 639
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1155524042
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)