Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt4m12
         (707 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z98269-3|CAB10974.1|  481|Drosophila melanogaster EG:87B1.4,FBgn...   345   5e-95
M80598-1|AAA28786.1|  481|Drosophila melanogaster 6-phosphogluco...   345   5e-95
AY089447-1|AAL90185.1|  481|Drosophila melanogaster AT26455p pro...   345   5e-95
AE014298-342|AAF45732.1|  481|Drosophila melanogaster CG3724-PA ...   345   5e-95
AY069497-1|AAL39642.1|  602|Drosophila melanogaster LD22344p pro...    31   1.2  
AE014134-1751|AAF52846.3|  602|Drosophila melanogaster CG4747-PA...    31   1.2  
BT004901-1|AAO47879.1|  483|Drosophila melanogaster LD07439p pro...    30   2.7  
AF068758-1|AAC79684.1|  823|Drosophila melanogaster SIR2 protein.      30   2.7  
AE014134-2285|AAF53248.1|  823|Drosophila melanogaster CG5216-PA...    30   2.7  
U73846-1|AAB61993.1|  808|Drosophila melanogaster testis-specifi...    29   6.2  
AE014296-778|AAX52730.2|  660|Drosophila melanogaster CG33545-PA...    29   8.2  

>Z98269-3|CAB10974.1|  481|Drosophila melanogaster
           EG:87B1.4,FBgn0004654;Pgd protein.
          Length = 481

 Score =  345 bits (847), Expect = 5e-95
 Identities = 155/201 (77%), Positives = 183/201 (91%)
 Frame = +1

Query: 103 EADIALIGLAVMGQNLILNMNDKGYVVCAFNRTVSKVEEFLKNEAKGTKVIGATSLDDMV 282
           +ADIALIGLAVMGQNLILNM++KG+VVCA+NRTV+KV+EFL NEAK TKVIGA SL+DMV
Sbjct: 4   QADIALIGLAVMGQNLILNMDEKGFVVCAYNRTVAKVKEFLANEAKDTKVIGADSLEDMV 63

Query: 283 SKLKRPRKIVLLVKAGFAVDEFVKKLIPLLSKGDIIIDGGNSQYLDTQKWCKELSGTGIL 462
           SKLK PRK++LLVKAG AVD+F+++L+PLLS GD+IIDGGNS+Y DT + C EL+  G+L
Sbjct: 64  SKLKSPRKVMLLVKAGSAVDDFIQQLVPLLSAGDVIIDGGNSEYQDTSRRCDELAKLGLL 123

Query: 463 YVGMGVSGGEDGARYGPSLMPGGHPAAWPHIKEIFQAICAKANDEPCCDWVGEDGAGHFV 642
           +VG GVSGGE+GAR+GPSLMPGGH AAWP I+ IFQAICAKA+ EPCC+WVG+ GAGHFV
Sbjct: 124 FVGSGVSGGEEGARHGPSLMPGGHEAAWPLIQPIFQAICAKADGEPCCEWVGDGGAGHFV 183

Query: 643 KMVHNGIEYGDMQLICEAYHL 705
           KMVHNGIEYGDMQLICEAYH+
Sbjct: 184 KMVHNGIEYGDMQLICEAYHI 204


>M80598-1|AAA28786.1|  481|Drosophila melanogaster
           6-phosphogluconate dehydrogenase protein.
          Length = 481

 Score =  345 bits (847), Expect = 5e-95
 Identities = 155/201 (77%), Positives = 183/201 (91%)
 Frame = +1

Query: 103 EADIALIGLAVMGQNLILNMNDKGYVVCAFNRTVSKVEEFLKNEAKGTKVIGATSLDDMV 282
           +ADIALIGLAVMGQNLILNM++KG+VVCA+NRTV+KV+EFL NEAK TKVIGA SL+DMV
Sbjct: 4   QADIALIGLAVMGQNLILNMDEKGFVVCAYNRTVAKVKEFLANEAKDTKVIGADSLEDMV 63

Query: 283 SKLKRPRKIVLLVKAGFAVDEFVKKLIPLLSKGDIIIDGGNSQYLDTQKWCKELSGTGIL 462
           SKLK PRK++LLVKAG AVD+F+++L+PLLS GD+IIDGGNS+Y DT + C EL+  G+L
Sbjct: 64  SKLKSPRKVMLLVKAGSAVDDFIQQLVPLLSAGDVIIDGGNSEYQDTSRRCDELAKLGLL 123

Query: 463 YVGMGVSGGEDGARYGPSLMPGGHPAAWPHIKEIFQAICAKANDEPCCDWVGEDGAGHFV 642
           +VG GVSGGE+GAR+GPSLMPGGH AAWP I+ IFQAICAKA+ EPCC+WVG+ GAGHFV
Sbjct: 124 FVGSGVSGGEEGARHGPSLMPGGHEAAWPLIQPIFQAICAKADGEPCCEWVGDGGAGHFV 183

Query: 643 KMVHNGIEYGDMQLICEAYHL 705
           KMVHNGIEYGDMQLICEAYH+
Sbjct: 184 KMVHNGIEYGDMQLICEAYHI 204


>AY089447-1|AAL90185.1|  481|Drosophila melanogaster AT26455p
           protein.
          Length = 481

 Score =  345 bits (847), Expect = 5e-95
 Identities = 155/201 (77%), Positives = 183/201 (91%)
 Frame = +1

Query: 103 EADIALIGLAVMGQNLILNMNDKGYVVCAFNRTVSKVEEFLKNEAKGTKVIGATSLDDMV 282
           +ADIALIGLAVMGQNLILNM++KG+VVCA+NRTV+KV+EFL NEAK TKVIGA SL+DMV
Sbjct: 4   QADIALIGLAVMGQNLILNMDEKGFVVCAYNRTVAKVKEFLANEAKDTKVIGADSLEDMV 63

Query: 283 SKLKRPRKIVLLVKAGFAVDEFVKKLIPLLSKGDIIIDGGNSQYLDTQKWCKELSGTGIL 462
           SKLK PRK++LLVKAG AVD+F+++L+PLLS GD+IIDGGNS+Y DT + C EL+  G+L
Sbjct: 64  SKLKSPRKVMLLVKAGSAVDDFIQQLVPLLSAGDVIIDGGNSEYQDTSRRCDELAKLGLL 123

Query: 463 YVGMGVSGGEDGARYGPSLMPGGHPAAWPHIKEIFQAICAKANDEPCCDWVGEDGAGHFV 642
           +VG GVSGGE+GAR+GPSLMPGGH AAWP I+ IFQAICAKA+ EPCC+WVG+ GAGHFV
Sbjct: 124 FVGSGVSGGEEGARHGPSLMPGGHEAAWPLIQPIFQAICAKADGEPCCEWVGDGGAGHFV 183

Query: 643 KMVHNGIEYGDMQLICEAYHL 705
           KMVHNGIEYGDMQLICEAYH+
Sbjct: 184 KMVHNGIEYGDMQLICEAYHI 204


>AE014298-342|AAF45732.1|  481|Drosophila melanogaster CG3724-PA
           protein.
          Length = 481

 Score =  345 bits (847), Expect = 5e-95
 Identities = 155/201 (77%), Positives = 183/201 (91%)
 Frame = +1

Query: 103 EADIALIGLAVMGQNLILNMNDKGYVVCAFNRTVSKVEEFLKNEAKGTKVIGATSLDDMV 282
           +ADIALIGLAVMGQNLILNM++KG+VVCA+NRTV+KV+EFL NEAK TKVIGA SL+DMV
Sbjct: 4   QADIALIGLAVMGQNLILNMDEKGFVVCAYNRTVAKVKEFLANEAKDTKVIGADSLEDMV 63

Query: 283 SKLKRPRKIVLLVKAGFAVDEFVKKLIPLLSKGDIIIDGGNSQYLDTQKWCKELSGTGIL 462
           SKLK PRK++LLVKAG AVD+F+++L+PLLS GD+IIDGGNS+Y DT + C EL+  G+L
Sbjct: 64  SKLKSPRKVMLLVKAGSAVDDFIQQLVPLLSAGDVIIDGGNSEYQDTSRRCDELAKLGLL 123

Query: 463 YVGMGVSGGEDGARYGPSLMPGGHPAAWPHIKEIFQAICAKANDEPCCDWVGEDGAGHFV 642
           +VG GVSGGE+GAR+GPSLMPGGH AAWP I+ IFQAICAKA+ EPCC+WVG+ GAGHFV
Sbjct: 124 FVGSGVSGGEEGARHGPSLMPGGHEAAWPLIQPIFQAICAKADGEPCCEWVGDGGAGHFV 183

Query: 643 KMVHNGIEYGDMQLICEAYHL 705
           KMVHNGIEYGDMQLICEAYH+
Sbjct: 184 KMVHNGIEYGDMQLICEAYHI 204


>AY069497-1|AAL39642.1|  602|Drosophila melanogaster LD22344p
           protein.
          Length = 602

 Score = 31.5 bits (68), Expect = 1.2
 Identities = 13/47 (27%), Positives = 26/47 (55%)
 Frame = +1

Query: 100 NEADIALIGLAVMGQNLILNMNDKGYVVCAFNRTVSKVEEFLKNEAK 240
           +E     +GL +MG  ++ ++   G+ V  +NRT+ K + F +  A+
Sbjct: 314 SEQTFGFLGLGMMGSTIVKDLIYTGHKVVVWNRTIDKCQPFAEAGAE 360


>AE014134-1751|AAF52846.3|  602|Drosophila melanogaster CG4747-PA
           protein.
          Length = 602

 Score = 31.5 bits (68), Expect = 1.2
 Identities = 13/47 (27%), Positives = 26/47 (55%)
 Frame = +1

Query: 100 NEADIALIGLAVMGQNLILNMNDKGYVVCAFNRTVSKVEEFLKNEAK 240
           +E     +GL +MG  ++ ++   G+ V  +NRT+ K + F +  A+
Sbjct: 314 SEQTFGFLGLGMMGSTIVKDLIYTGHKVVVWNRTIDKCQPFAEAGAE 360


>BT004901-1|AAO47879.1|  483|Drosophila melanogaster LD07439p
           protein.
          Length = 483

 Score = 30.3 bits (65), Expect = 2.7
 Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
 Frame = +1

Query: 223 LKNEAKG-TKVIGATSLDDMVSKLKRPRKIVLLVKAGFAV 339
           L NE K   K+    + DD++S +K+ +KI++L  AG +V
Sbjct: 195 LLNEPKRRNKLASVNTFDDVISLVKKSQKIIVLTGAGVSV 234


>AF068758-1|AAC79684.1|  823|Drosophila melanogaster SIR2 protein.
          Length = 823

 Score = 30.3 bits (65), Expect = 2.7
 Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
 Frame = +1

Query: 223 LKNEAKG-TKVIGATSLDDMVSKLKRPRKIVLLVKAGFAV 339
           L NE K   K+    + DD++S +K+ +KI++L  AG +V
Sbjct: 193 LLNEPKRRNKLASVNTFDDVISLVKKSQKIIVLTGAGVSV 232


>AE014134-2285|AAF53248.1|  823|Drosophila melanogaster CG5216-PA
           protein.
          Length = 823

 Score = 30.3 bits (65), Expect = 2.7
 Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
 Frame = +1

Query: 223 LKNEAKG-TKVIGATSLDDMVSKLKRPRKIVLLVKAGFAV 339
           L NE K   K+    + DD++S +K+ +KI++L  AG +V
Sbjct: 195 LLNEPKRRNKLASVNTFDDVISLVKKSQKIIVLTGAGVSV 234


>U73846-1|AAB61993.1|  808|Drosophila melanogaster testis-specific
           RNP-type RNA bindingprotein protein.
          Length = 808

 Score = 29.1 bits (62), Expect = 6.2
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = -2

Query: 676 YHHIQFHCAPF*QNGLLHLHRPSHSTVHH 590
           +H +Q H A   Q   LH H+P H+  HH
Sbjct: 107 HHQLQRHTALHQQQQQLHHHQPHHNHHHH 135


>AE014296-778|AAX52730.2|  660|Drosophila melanogaster CG33545-PA
           protein.
          Length = 660

 Score = 28.7 bits (61), Expect = 8.2
 Identities = 15/34 (44%), Positives = 20/34 (58%)
 Frame = -1

Query: 695 ASQISCISPYSIPLCTILTKWPAPSSPTQSQHGS 594
           A+QISC S  S+PL  +L   P  SSP  S + +
Sbjct: 292 ATQISCPSAPSVPLPLVLPPNPLTSSPHPSANSN 325


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,213,223
Number of Sequences: 53049
Number of extensions: 706785
Number of successful extensions: 1956
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1832
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1955
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3128965752
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)