Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt4m05
(706 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 25 0.53
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 23 2.8
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 23 2.8
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 23 2.8
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 23 2.8
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 23 2.8
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 23 2.8
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 23 2.8
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 22 4.9
DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 22 6.5
DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase ... 22 6.5
DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase ... 22 6.5
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 25.4 bits (53), Expect = 0.53
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = +1
Query: 73 VVFSVHSVSYRYENNSCPRYRGTYYKFCVSD 165
V F H RY N S Y Y KFC ++
Sbjct: 427 VEFWEHHFQCRYPNASVTPYNKNYTKFCSTE 457
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.0 bits (47), Expect = 2.8
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = -1
Query: 145 NRYLDNEDTSCSRNDMKRNEQKTRR 71
N Y ++ + SCSR+ + ++K RR
Sbjct: 243 NSYRNDGERSCSRDRSREYKKKDRR 267
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.0 bits (47), Expect = 2.8
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = -1
Query: 145 NRYLDNEDTSCSRNDMKRNEQKTRR 71
N Y ++ + SCSR+ + ++K RR
Sbjct: 243 NSYRNDGERSCSRDRSREYKKKDRR 267
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.0 bits (47), Expect = 2.8
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = -1
Query: 145 NRYLDNEDTSCSRNDMKRNEQKTRR 71
N Y ++ + SCSR+ + ++K RR
Sbjct: 243 NSYRNDGERSCSRDRSREYKKKDRR 267
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.0 bits (47), Expect = 2.8
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = -1
Query: 145 NRYLDNEDTSCSRNDMKRNEQKTRR 71
N Y ++ + SCSR+ + ++K RR
Sbjct: 243 NSYRNDGERSCSRDRSREYKKKDRR 267
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.0 bits (47), Expect = 2.8
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = -1
Query: 145 NRYLDNEDTSCSRNDMKRNEQKTRR 71
N Y ++ + SCSR+ + ++K RR
Sbjct: 243 NSYRNDGERSCSRDRSREYKKKDRR 267
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.0 bits (47), Expect = 2.8
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = -1
Query: 145 NRYLDNEDTSCSRNDMKRNEQKTRR 71
N Y ++ + SCSR+ + ++K RR
Sbjct: 243 NSYRNDGERSCSRDRSREYKKKDRR 267
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 23.0 bits (47), Expect = 2.8
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = -1
Query: 145 NRYLDNEDTSCSRNDMKRNEQKTRR 71
N Y ++ + SCSR+ + ++K RR
Sbjct: 243 NSYRNDGERSCSRDRSREYKKKDRR 267
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 22.2 bits (45), Expect = 4.9
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -1
Query: 145 NRYLDNEDTSCSRNDMKRNEQKTRR 71
N Y ++ + SCSR D R +K RR
Sbjct: 243 NSYRNDGERSCSR-DRSREYKKDRR 266
>DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex
determiner protein.
Length = 191
Score = 21.8 bits (44), Expect = 6.5
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = +1
Query: 97 SYRYENNSCPRYRGTYY 147
+Y Y NN+ Y+ YY
Sbjct: 103 NYNYNNNNYNNYKKLYY 119
>DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase
isoform B protein.
Length = 931
Score = 21.8 bits (44), Expect = 6.5
Identities = 10/26 (38%), Positives = 12/26 (46%)
Frame = -1
Query: 136 LDNEDTSCSRNDMKRNEQKTRRDALV 59
L N D +N M N Q+T A V
Sbjct: 372 LSNNDVYLYQNTMSNNNQRTEWSATV 397
>DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase
isoform A protein.
Length = 969
Score = 21.8 bits (44), Expect = 6.5
Identities = 10/26 (38%), Positives = 12/26 (46%)
Frame = -1
Query: 136 LDNEDTSCSRNDMKRNEQKTRRDALV 59
L N D +N M N Q+T A V
Sbjct: 410 LSNNDVYLYQNTMSNNNQRTEWSATV 435
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 180,067
Number of Sequences: 438
Number of extensions: 3707
Number of successful extensions: 13
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21683070
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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