Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt4m04
(716 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L07144-9|AAK21441.1| 737|Caenorhabditis elegans Hypothetical pr... 37 0.013
AF045640-8|AAC02571.1| 394|Caenorhabditis elegans Hypothetical ... 35 0.067
Z29560-5|CAA82664.1| 1385|Caenorhabditis elegans Hypothetical pr... 33 0.15
Z69792-5|CAA93668.3| 1410|Caenorhabditis elegans Hypothetical pr... 33 0.20
AL022270-3|CAB63434.2| 1410|Caenorhabditis elegans Hypothetical ... 33 0.20
AL117204-9|CAB55124.1| 358|Caenorhabditis elegans Hypothetical ... 31 0.82
AF125952-4|AAD14698.1| 330|Caenorhabditis elegans Hypothetical ... 30 1.9
AC006722-10|ABP57811.1| 330|Caenorhabditis elegans Hypothetical... 30 1.9
U64843-1|AAF98232.1| 1067|Caenorhabditis elegans Hypothetical pr... 28 5.8
Z81504-1|CAB04116.1| 426|Caenorhabditis elegans Hypothetical pr... 28 7.7
U50071-8|AAV34806.1| 795|Caenorhabditis elegans Uncoordinated p... 28 7.7
U50071-7|AAV34805.1| 905|Caenorhabditis elegans Uncoordinated p... 28 7.7
U50071-5|AAA93443.1| 2039|Caenorhabditis elegans Uncoordinated p... 28 7.7
U50071-4|AAM75382.1| 1841|Caenorhabditis elegans Uncoordinated p... 28 7.7
U50071-3|AAA93444.1| 1867|Caenorhabditis elegans Uncoordinated p... 28 7.7
U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated p... 28 7.7
U39847-3|AAB41826.1| 1815|Caenorhabditis elegans AO49 ankyrin pr... 28 7.7
U39847-2|AAB41828.1| 1867|Caenorhabditis elegans AO66 ankyrin pr... 28 7.7
U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin pr... 28 7.7
U21734-1|AAA85854.1| 1786|Caenorhabditis elegans UNC-44 protein. 28 7.7
U21732-1|AAA85853.1| 970|Caenorhabditis elegans UNC-44 protein. 28 7.7
U21731-1|AAA85852.1| 985|Caenorhabditis elegans UNC-44 protein. 28 7.7
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 28 7.7
AF003140-5|AAD47120.1| 814|Caenorhabditis elegans Hypothetical ... 28 7.7
AF003140-4|AAD47119.1| 2712|Caenorhabditis elegans Hypothetical ... 28 7.7
AF003140-3|AAM15563.1| 2710|Caenorhabditis elegans Hypothetical ... 28 7.7
>L07144-9|AAK21441.1| 737|Caenorhabditis elegans Hypothetical
protein R05D3.2 protein.
Length = 737
Score = 37.1 bits (82), Expect = 0.013
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = -2
Query: 646 RGSVYVSLVVTDVIAASLIVEPVHKIGADLLQALGGDDV--WLSIVLVGRRWEYTAI 482
R SV++S T SL + P IG +LLQ G+ WLS L+G W Y +
Sbjct: 110 RVSVWISSTATATSIGSLTLLPFSVIGVELLQLYDGNYYLQWLSYSLIGALWNYVFV 166
>AF045640-8|AAC02571.1| 394|Caenorhabditis elegans Hypothetical
protein C11D2.2 protein.
Length = 394
Score = 34.7 bits (76), Expect = 0.067
Identities = 20/70 (28%), Positives = 39/70 (55%)
Frame = +2
Query: 179 EIVNDTESTVSVTEAQVVELETDVKEKEDETFEETSPVELLPDTENLEVRSGKYQLNDGL 358
E+++DT ++ +V++ D+ K T++E S ++P +E +RS K ++ND
Sbjct: 276 EVISDTGTSFIGGPGKVIQ---DIANKYGATYDEYSDSYVIPCSEIKNLRSLKMKINDLT 332
Query: 359 VGEEPVNLEA 388
+P+NL A
Sbjct: 333 FEIDPINLVA 342
>Z29560-5|CAA82664.1| 1385|Caenorhabditis elegans Hypothetical
protein K03H1.5 protein.
Length = 1385
Score = 33.5 bits (73), Expect = 0.15
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +2
Query: 662 NFNFQLPFFGFRFNYTRI 715
N F PFFGFRFNYT +
Sbjct: 143 NLGFDCPFFGFRFNYTMV 160
>Z69792-5|CAA93668.3| 1410|Caenorhabditis elegans Hypothetical
protein F40E10.4 protein.
Length = 1410
Score = 33.1 bits (72), Expect = 0.20
Identities = 25/103 (24%), Positives = 41/103 (39%), Gaps = 4/103 (3%)
Frame = +2
Query: 269 TFEETSPVELLPDTENLEVRSGKYQLNDGLVGEEPVNLEAVDFNSNNVESEKQLLSPPST 448
TF E L L + K +V +E NLE +D + NN++ + +T
Sbjct: 550 TFINDKSFEKLSKLRELRLNDNKLHHFSSMVLDEQSNLEILDLSGNNIQCFSSIFFNKAT 609
Query: 449 TV----VTGTDYSYIDGRVLPATTYQNNGQPYVITTQRLQQIR 565
+ V G D D R+LP ++ + + I QQ +
Sbjct: 610 RIREIKVIGNDL-LCDCRILPLMSWLRSNSSHSIDIPPCQQFQ 651
>AL022270-3|CAB63434.2| 1410|Caenorhabditis elegans Hypothetical
protein F40E10.4 protein.
Length = 1410
Score = 33.1 bits (72), Expect = 0.20
Identities = 25/103 (24%), Positives = 41/103 (39%), Gaps = 4/103 (3%)
Frame = +2
Query: 269 TFEETSPVELLPDTENLEVRSGKYQLNDGLVGEEPVNLEAVDFNSNNVESEKQLLSPPST 448
TF E L L + K +V +E NLE +D + NN++ + +T
Sbjct: 550 TFINDKSFEKLSKLRELRLNDNKLHHFSSMVLDEQSNLEILDLSGNNIQCFSSIFFNKAT 609
Query: 449 TV----VTGTDYSYIDGRVLPATTYQNNGQPYVITTQRLQQIR 565
+ V G D D R+LP ++ + + I QQ +
Sbjct: 610 RIREIKVIGNDL-LCDCRILPLMSWLRSNSSHSIDIPPCQQFQ 651
>AL117204-9|CAB55124.1| 358|Caenorhabditis elegans Hypothetical
protein Y116A8C.18 protein.
Length = 358
Score = 31.1 bits (67), Expect = 0.82
Identities = 25/91 (27%), Positives = 50/91 (54%), Gaps = 6/91 (6%)
Frame = +2
Query: 176 DEIVND---TESTVSVTEAQVVELETDVKEKEDETFEETSPVELLPDTENLEVRSGKYQL 346
+EIVN+ +E + E Q+ E + ++KE++ + ++ L +TE +E + K ++
Sbjct: 65 EEIVNELKLSEELIDCLEKQLQESKIELKEEKLSKKHLLTTMKSL-ETEKME-QEHKTKI 122
Query: 347 NDGLVGEEPVN---LEAVDFNSNNVESEKQL 430
+ V E + LEA D++ N+E E+Q+
Sbjct: 123 MNKEVEELKIRVKELEATDYSEKNIELERQV 153
>AF125952-4|AAD14698.1| 330|Caenorhabditis elegans Hypothetical
protein C01B4.6 protein.
Length = 330
Score = 29.9 bits (64), Expect = 1.9
Identities = 23/73 (31%), Positives = 36/73 (49%)
Frame = +2
Query: 230 VELETDVKEKEDETFEETSPVELLPDTENLEVRSGKYQLNDGLVGEEPVNLEAVDFNSNN 409
+E+E D + D+TF T + + DT + RSGK G E E +D +++
Sbjct: 179 LEMEADEFVEVDDTFCPTGAIRSVTDT-GFDFRSGKQLKESGKDAE-----ELLDLDNDL 232
Query: 410 VESEKQLLSPPST 448
V ++K S PST
Sbjct: 233 VITKKTPPSTPST 245
>AC006722-10|ABP57811.1| 330|Caenorhabditis elegans Hypothetical
protein Y19D10A.16 protein.
Length = 330
Score = 29.9 bits (64), Expect = 1.9
Identities = 23/73 (31%), Positives = 36/73 (49%)
Frame = +2
Query: 230 VELETDVKEKEDETFEETSPVELLPDTENLEVRSGKYQLNDGLVGEEPVNLEAVDFNSNN 409
+E+E D + D+TF T + + DT + RSGK G E E +D +++
Sbjct: 179 LEMEADEFVEVDDTFCPTGAIRSVTDT-GFDFRSGKQLKESGKDAE-----ELLDLDNDL 232
Query: 410 VESEKQLLSPPST 448
V ++K S PST
Sbjct: 233 VITKKTPPSTPST 245
>U64843-1|AAF98232.1| 1067|Caenorhabditis elegans Hypothetical
protein K06C4.15 protein.
Length = 1067
Score = 28.3 bits (60), Expect = 5.8
Identities = 18/45 (40%), Positives = 26/45 (57%)
Frame = +2
Query: 407 NVESEKQLLSPPSTTVVTGTDYSYIDGRVLPATTYQNNGQPYVIT 541
N E++K +L PS +V TD+ +I V T YQN+ Q VI+
Sbjct: 637 NPETKKHIL--PSGRLVEITDFGHIVHPVPDTTIYQNHTQIEVIS 679
>Z81504-1|CAB04116.1| 426|Caenorhabditis elegans Hypothetical
protein F15H9.1 protein.
Length = 426
Score = 27.9 bits (59), Expect = 7.7
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = +2
Query: 188 NDTESTVSV--TEAQVVELETDVKEKEDETFEETSPVELLPDTEN 316
N T ST++V T A E+E E++DE +E +E + +N
Sbjct: 354 NSTSSTINVPKTAAPEEEIEEGPSEEKDENVDEKDDIENETEVDN 398
>U50071-8|AAV34806.1| 795|Caenorhabditis elegans Uncoordinated
protein 44, isoform d protein.
Length = 795
Score = 27.9 bits (59), Expect = 7.7
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +2
Query: 254 EKEDETFEETSPVELLPDTENLEVRSGKYQ 343
+KED+T E+ +L+ + ++EV GK+Q
Sbjct: 345 DKEDKTLEKQEHFKLIAKSRDVEVLKGKHQ 374
>U50071-7|AAV34805.1| 905|Caenorhabditis elegans Uncoordinated
protein 44, isoform b protein.
Length = 905
Score = 27.9 bits (59), Expect = 7.7
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +2
Query: 254 EKEDETFEETSPVELLPDTENLEVRSGKYQ 343
+KED+T E+ +L+ + ++EV GK+Q
Sbjct: 455 DKEDKTLEKQEHFKLIAKSRDVEVLKGKHQ 484
>U50071-5|AAA93443.1| 2039|Caenorhabditis elegans Uncoordinated
protein 44, isoform a protein.
Length = 2039
Score = 27.9 bits (59), Expect = 7.7
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +2
Query: 254 EKEDETFEETSPVELLPDTENLEVRSGKYQ 343
+KED+T E+ +L+ + ++EV GK+Q
Sbjct: 1359 DKEDKTLEKQEHFKLIAKSRDVEVLKGKHQ 1388
>U50071-4|AAM75382.1| 1841|Caenorhabditis elegans Uncoordinated
protein 44, isoform e protein.
Length = 1841
Score = 27.9 bits (59), Expect = 7.7
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +2
Query: 254 EKEDETFEETSPVELLPDTENLEVRSGKYQ 343
+KED+T E+ +L+ + ++EV GK+Q
Sbjct: 1359 DKEDKTLEKQEHFKLIAKSRDVEVLKGKHQ 1388
>U50071-3|AAA93444.1| 1867|Caenorhabditis elegans Uncoordinated
protein 44, isoform c protein.
Length = 1867
Score = 27.9 bits (59), Expect = 7.7
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +2
Query: 254 EKEDETFEETSPVELLPDTENLEVRSGKYQ 343
+KED+T E+ +L+ + ++EV GK+Q
Sbjct: 1359 DKEDKTLEKQEHFKLIAKSRDVEVLKGKHQ 1388
>U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated
protein 44, isoform f protein.
Length = 6994
Score = 27.9 bits (59), Expect = 7.7
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +2
Query: 254 EKEDETFEETSPVELLPDTENLEVRSGKYQ 343
+KED+T E+ +L+ + ++EV GK+Q
Sbjct: 1365 DKEDKTLEKQEHFKLIAKSRDVEVLKGKHQ 1394
>U39847-3|AAB41826.1| 1815|Caenorhabditis elegans AO49 ankyrin
protein.
Length = 1815
Score = 27.9 bits (59), Expect = 7.7
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +2
Query: 254 EKEDETFEETSPVELLPDTENLEVRSGKYQ 343
+KED+T E+ +L+ + ++EV GK+Q
Sbjct: 1365 DKEDKTLEKQEHFKLIAKSRDVEVLKGKHQ 1394
>U39847-2|AAB41828.1| 1867|Caenorhabditis elegans AO66 ankyrin
protein.
Length = 1867
Score = 27.9 bits (59), Expect = 7.7
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +2
Query: 254 EKEDETFEETSPVELLPDTENLEVRSGKYQ 343
+KED+T E+ +L+ + ++EV GK+Q
Sbjct: 1359 DKEDKTLEKQEHFKLIAKSRDVEVLKGKHQ 1388
>U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin
protein.
Length = 6994
Score = 27.9 bits (59), Expect = 7.7
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +2
Query: 254 EKEDETFEETSPVELLPDTENLEVRSGKYQ 343
+KED+T E+ +L+ + ++EV GK+Q
Sbjct: 1365 DKEDKTLEKQEHFKLIAKSRDVEVLKGKHQ 1394
>U21734-1|AAA85854.1| 1786|Caenorhabditis elegans UNC-44 protein.
Length = 1786
Score = 27.9 bits (59), Expect = 7.7
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +2
Query: 254 EKEDETFEETSPVELLPDTENLEVRSGKYQ 343
+KED+T E+ +L+ + ++EV GK+Q
Sbjct: 1365 DKEDKTLEKQEHFKLIAKSRDVEVLKGKHQ 1394
>U21732-1|AAA85853.1| 970|Caenorhabditis elegans UNC-44 protein.
Length = 970
Score = 27.9 bits (59), Expect = 7.7
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +2
Query: 254 EKEDETFEETSPVELLPDTENLEVRSGKYQ 343
+KED+T E+ +L+ + ++EV GK+Q
Sbjct: 462 DKEDKTLEKQEHFKLIAKSRDVEVLKGKHQ 491
>U21731-1|AAA85852.1| 985|Caenorhabditis elegans UNC-44 protein.
Length = 985
Score = 27.9 bits (59), Expect = 7.7
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +2
Query: 254 EKEDETFEETSPVELLPDTENLEVRSGKYQ 343
+KED+T E+ +L+ + ++EV GK+Q
Sbjct: 535 DKEDKTLEKQEHFKLIAKSRDVEVLKGKHQ 564
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 27.9 bits (59), Expect = 7.7
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Frame = +3
Query: 348 TMA*LEKSQLTLKLSISTRTMLKAKSNSSRHQVLRSS-PELTILTSMAVYSQRRPT 512
TM +K ++T+K S+ST + + N+S H ++RS P++++L RPT
Sbjct: 801 TMTAEKKREITMKPSVST-SARPSLINTSSHPMVRSPLPKMSVLEKPKPLRITRPT 855
>AF003140-5|AAD47120.1| 814|Caenorhabditis elegans Hypothetical
protein C44E4.1b protein.
Length = 814
Score = 27.9 bits (59), Expect = 7.7
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -2
Query: 463 SGDDRSTWWREELLFAFNIVRVEIDSFKVNWL 368
+G+DR W RE L+ N R +D F N L
Sbjct: 754 TGEDRLEWLREHLVETINKTRGFVDDFDSNIL 785
>AF003140-4|AAD47119.1| 2712|Caenorhabditis elegans Hypothetical
protein C44E4.1a protein.
Length = 2712
Score = 27.9 bits (59), Expect = 7.7
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -2
Query: 463 SGDDRSTWWREELLFAFNIVRVEIDSFKVNWL 368
+G+DR W RE L+ N R +D F N L
Sbjct: 2652 TGEDRLEWLREHLVETINKTRGFVDDFDSNIL 2683
>AF003140-3|AAM15563.1| 2710|Caenorhabditis elegans Hypothetical
protein C44E4.1c protein.
Length = 2710
Score = 27.9 bits (59), Expect = 7.7
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -2
Query: 463 SGDDRSTWWREELLFAFNIVRVEIDSFKVNWL 368
+G+DR W RE L+ N R +D F N L
Sbjct: 2650 TGEDRLEWLREHLVETINKTRGFVDDFDSNIL 2681
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,849,873
Number of Sequences: 27780
Number of extensions: 333871
Number of successful extensions: 1212
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1145
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1212
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1676746902
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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