Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt4l21
(738 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY058542-1|AAL13771.1| 403|Drosophila melanogaster LD24460p pro... 207 1e-53
AE014296-1490|AAF50388.1| 403|Drosophila melanogaster CG5978-PA... 207 1e-53
BT023950-1|ABB36454.1| 654|Drosophila melanogaster GH10459p pro... 56 5e-08
AE014297-1645|AAF54919.1| 654|Drosophila melanogaster CG8449-PA... 56 5e-08
AY061479-1|AAL29027.1| 546|Drosophila melanogaster LD44506p pro... 50 3e-06
AE014297-2927|AAF55847.2| 546|Drosophila melanogaster CG5745-PA... 50 3e-06
AY075283-1|AAL68150.2| 293|Drosophila melanogaster AT30334p pro... 29 6.6
AE014134-1940|AAF52999.1| 281|Drosophila melanogaster CG17118-P... 29 6.6
>AY058542-1|AAL13771.1| 403|Drosophila melanogaster LD24460p
protein.
Length = 403
Score = 207 bits (505), Expect = 1e-53
Identities = 115/243 (47%), Positives = 155/243 (63%), Gaps = 26/243 (10%)
Frame = +2
Query: 86 MSLHKARIKAFEEVL--DQDVIDMQQLQKLAFNGIPDDKGLRSLVWKILLHYLPQEKNAR 259
MS+ KAR+K FE+VL QD+ID++QL+KLAFNG+PD + R+L WK+LL YL +++
Sbjct: 1 MSIFKARVKEFEDVLAGPQDLIDLKQLRKLAFNGVPDVQSFRALSWKLLLGYLGPRRSSW 60
Query: 260 ETTLIKKRQLYKQFIEEIIVSPG---------------------GPTDHPLNMSPDSSWS 376
TTL +KR LYKQFIEE+++ PG G DHPL+ P+S+W+
Sbjct: 61 TTTLAQKRALYKQFIEELVLPPGHSSNRASVDGGDGDKVDSGGVGLQDHPLSEGPESAWN 120
Query: 377 TYFKDNEVLLQIDKDVRRLCPDISFFQSATEFPCPEVVNSNGI--KRLHKRVEQSVLKYA 550
T+F DNE LLQIDKDVRRLCPDISFFQ T++PC VV+S G +RLH+RV +VL A
Sbjct: 121 TFFNDNEFLLQIDKDVRRLCPDISFFQQPTDYPCEIVVHSKGEHGRRLHERVVPAVLSSA 180
Query: 551 TLERRGLGVAKLSNEIKRAENITSGDYAPLNEGCEAHWGGGGTYAVSVCEAEPGTG-LRS 727
+ER+GLG+ K++ KR+ +YA + EG EAHW + PG G ++
Sbjct: 181 NVERKGLGMTKINLITKRSVE----NYAAMEEGQEAHWEVVQRILFIYAKLNPGQGYVQG 236
Query: 728 RNE 736
NE
Sbjct: 237 MNE 239
>AE014296-1490|AAF50388.1| 403|Drosophila melanogaster CG5978-PA
protein.
Length = 403
Score = 207 bits (505), Expect = 1e-53
Identities = 115/243 (47%), Positives = 155/243 (63%), Gaps = 26/243 (10%)
Frame = +2
Query: 86 MSLHKARIKAFEEVL--DQDVIDMQQLQKLAFNGIPDDKGLRSLVWKILLHYLPQEKNAR 259
MS+ KAR+K FE+VL QD+ID++QL+KLAFNG+PD + R+L WK+LL YL +++
Sbjct: 1 MSIFKARVKEFEDVLAGPQDLIDLKQLRKLAFNGVPDVQSFRALSWKLLLGYLGPRRSSW 60
Query: 260 ETTLIKKRQLYKQFIEEIIVSPG---------------------GPTDHPLNMSPDSSWS 376
TTL +KR LYKQFIEE+++ PG G DHPL+ P+S+W+
Sbjct: 61 TTTLAQKRALYKQFIEELVLPPGHSSNRASVDGGDGDKVDSGGVGLQDHPLSEGPESAWN 120
Query: 377 TYFKDNEVLLQIDKDVRRLCPDISFFQSATEFPCPEVVNSNGI--KRLHKRVEQSVLKYA 550
T+F DNE LLQIDKDVRRLCPDISFFQ T++PC VV+S G +RLH+RV +VL A
Sbjct: 121 TFFNDNEFLLQIDKDVRRLCPDISFFQQPTDYPCEIVVHSKGEHGRRLHERVVPAVLSSA 180
Query: 551 TLERRGLGVAKLSNEIKRAENITSGDYAPLNEGCEAHWGGGGTYAVSVCEAEPGTG-LRS 727
+ER+GLG+ K++ KR+ +YA + EG EAHW + PG G ++
Sbjct: 181 NVERKGLGMTKINLITKRSVE----NYAAMEEGQEAHWEVVQRILFIYAKLNPGQGYVQG 236
Query: 728 RNE 736
NE
Sbjct: 237 MNE 239
>BT023950-1|ABB36454.1| 654|Drosophila melanogaster GH10459p
protein.
Length = 654
Score = 56.0 bits (129), Expect = 5e-08
Identities = 37/130 (28%), Positives = 62/130 (47%), Gaps = 4/130 (3%)
Frame = +2
Query: 80 NSMSLHKARIKAFEEVLDQDVIDMQQLQKLAFNGIPDDKGLRSLVWKILLHYLPQEKNAR 259
NS+ ++ + E LD D + L++ AF G RS+ W +LL L E +
Sbjct: 39 NSVERYRQEWQVLLENLDADP---ESLRQSAFAGDLKMSKFRSVHWALLLRVLTSEHRSW 95
Query: 260 ETTLIKKRQLYKQFIEEIIVSPG----GPTDHPLNMSPDSSWSTYFKDNEVLLQIDKDVR 427
+ +++R Y +F + + +P D PL+ S S W+ YF D ++ I +DV
Sbjct: 96 TSQRLQQRVRYDKFRADYVRNPHQLAVDCNDDPLSQSTQSVWNQYFSDQDLFAVIRQDVV 155
Query: 428 RLCPDISFFQ 457
R P + FF+
Sbjct: 156 RTFPGVDFFR 165
>AE014297-1645|AAF54919.1| 654|Drosophila melanogaster CG8449-PA
protein.
Length = 654
Score = 56.0 bits (129), Expect = 5e-08
Identities = 37/130 (28%), Positives = 62/130 (47%), Gaps = 4/130 (3%)
Frame = +2
Query: 80 NSMSLHKARIKAFEEVLDQDVIDMQQLQKLAFNGIPDDKGLRSLVWKILLHYLPQEKNAR 259
NS+ ++ + E LD D + L++ AF G RS+ W +LL L E +
Sbjct: 39 NSVERYRQEWQVLLENLDADP---ESLRQSAFAGDLKMSKFRSVHWALLLRVLTSEHRSW 95
Query: 260 ETTLIKKRQLYKQFIEEIIVSPG----GPTDHPLNMSPDSSWSTYFKDNEVLLQIDKDVR 427
+ +++R Y +F + + +P D PL+ S S W+ YF D ++ I +DV
Sbjct: 96 TSQRLQQRVRYDKFRADYVRNPHQLAVDCNDDPLSQSTQSVWNQYFSDQDLFAVIRQDVV 155
Query: 428 RLCPDISFFQ 457
R P + FF+
Sbjct: 156 RTFPGVDFFR 165
>AY061479-1|AAL29027.1| 546|Drosophila melanogaster LD44506p
protein.
Length = 546
Score = 50.0 bits (114), Expect = 3e-06
Identities = 23/69 (33%), Positives = 43/69 (62%)
Frame = +2
Query: 89 SLHKARIKAFEEVLDQDVIDMQQLQKLAFNGIPDDKGLRSLVWKILLHYLPQEKNARETT 268
S ++ +I+ F+ VLD +D+ L+K++++G+P + +R++ W++L YLP R
Sbjct: 216 SEYETKIEKFQVVLDSPQLDLVALKKISWSGVP--RKMRAVSWRLLSKYLPPSSERRMAV 273
Query: 269 LIKKRQLYK 295
L KRQ Y+
Sbjct: 274 LESKRQGYQ 282
Score = 34.3 bits (75), Expect = 0.18
Identities = 14/28 (50%), Positives = 21/28 (75%)
Frame = +3
Query: 654 RLTGEVVERMLFLYAKLNPGQGYVQGMN 737
+L E+ ER+LF++A +P GYVQG+N
Sbjct: 322 QLVQEMFERILFIWAIRHPASGYVQGIN 349
>AE014297-2927|AAF55847.2| 546|Drosophila melanogaster CG5745-PA
protein.
Length = 546
Score = 50.0 bits (114), Expect = 3e-06
Identities = 23/69 (33%), Positives = 43/69 (62%)
Frame = +2
Query: 89 SLHKARIKAFEEVLDQDVIDMQQLQKLAFNGIPDDKGLRSLVWKILLHYLPQEKNARETT 268
S ++ +I+ F+ VLD +D+ L+K++++G+P + +R++ W++L YLP R
Sbjct: 216 SEYETKIEKFQVVLDSPQLDLVALKKISWSGVP--RKMRAVSWRLLSKYLPPSSERRMAV 273
Query: 269 LIKKRQLYK 295
L KRQ Y+
Sbjct: 274 LESKRQGYQ 282
Score = 34.3 bits (75), Expect = 0.18
Identities = 14/28 (50%), Positives = 21/28 (75%)
Frame = +3
Query: 654 RLTGEVVERMLFLYAKLNPGQGYVQGMN 737
+L E+ ER+LF++A +P GYVQG+N
Sbjct: 322 QLVQEMFERILFIWAIRHPASGYVQGIN 349
>AY075283-1|AAL68150.2| 293|Drosophila melanogaster AT30334p
protein.
Length = 293
Score = 29.1 bits (62), Expect = 6.6
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Frame = +2
Query: 341 HPLNMSPDSSWSTYFKDNEVLLQIDKDVRRLCPDISFFQSATEF-PCP-EVVNSNGIK 508
+ + SP ++WS+Y K+ + D+D++ L +I +T F CP E GIK
Sbjct: 27 YSVGSSPLNNWSSYTKNGYIKRIYDEDIKSLVLEIMGSNVSTTFIHCPSECKEQLGIK 84
>AE014134-1940|AAF52999.1| 281|Drosophila melanogaster CG17118-PA
protein.
Length = 281
Score = 29.1 bits (62), Expect = 6.6
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Frame = +2
Query: 341 HPLNMSPDSSWSTYFKDNEVLLQIDKDVRRLCPDISFFQSATEF-PCP-EVVNSNGIK 508
+ + SP ++WS+Y K+ + D+D++ L +I +T F CP E GIK
Sbjct: 15 YSVGSSPLNNWSSYTKNGYIKRIYDEDIKSLVLEIMGSNVSTTFIHCPSECKEQLGIK 72
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,608,732
Number of Sequences: 53049
Number of extensions: 604713
Number of successful extensions: 1703
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1608
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1689
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3334818762
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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