Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt4l21
(738 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68117-1|CAA92181.2| 459|Caenorhabditis elegans Hypothetical pr... 110 9e-25
Z37983-2|CAA86055.1| 585|Caenorhabditis elegans Hypothetical pr... 63 2e-10
Z81074-7|CAB03042.1| 495|Caenorhabditis elegans Hypothetical pr... 41 0.001
Z81074-6|CAE46669.1| 475|Caenorhabditis elegans Hypothetical pr... 41 0.001
AF003145-6|AAK68678.1| 1420|Caenorhabditis elegans Mtk1/mekk4 ho... 30 1.5
AF003145-5|AAB57718.1| 1418|Caenorhabditis elegans Mtk1/mekk4 ho... 30 1.5
AL032626-17|CAA21536.1| 282|Caenorhabditis elegans Hypothetical... 28 6.0
AF045641-5|AAC02577.2| 554|Caenorhabditis elegans Hypothetical ... 28 6.0
>Z68117-1|CAA92181.2| 459|Caenorhabditis elegans Hypothetical
protein F45E6.3 protein.
Length = 459
Score = 110 bits (265), Expect = 9e-25
Identities = 62/142 (43%), Positives = 84/142 (59%), Gaps = 13/142 (9%)
Frame = +2
Query: 89 SLHKARIKAFEEVL--DQDVIDMQQLQKLAFNGIPDDKGLRSLVWKILLHYLPQEKNARE 262
S + R+ EEVL ID+ +L+ G+P+ LR L W++LLHYLP E++ +
Sbjct: 3 SRYMERLAKIEEVLLIANKKIDINELRAGCSYGVPES--LRPLAWRLLLHYLPLERHKWQ 60
Query: 263 TTLIKKRQLYKQFIEEIIVSPGGPT-----------DHPLNMSPDSSWSTYFKDNEVLLQ 409
T L ++R Y Q IE+IIV PG + DHPL+ P S W +F+DN+VL Q
Sbjct: 61 TFLAEQRDNYDQMIEQIIVEPGTASLQQSAAQNQDNDHPLSDHPTSDWQAFFQDNKVLSQ 120
Query: 410 IDKDVRRLCPDISFFQSATEFP 475
IDKDVRRL P+I FFQ + FP
Sbjct: 121 IDKDVRRLYPEIQFFQLLSRFP 142
Score = 44.0 bits (99), Expect = 1e-04
Identities = 18/24 (75%), Positives = 22/24 (91%)
Frame = +3
Query: 666 EVVERMLFLYAKLNPGQGYVQGMN 737
++VER+LF+YAKLNPG YVQGMN
Sbjct: 233 KIVERILFIYAKLNPGVQYVQGMN 256
>Z37983-2|CAA86055.1| 585|Caenorhabditis elegans Hypothetical
protein B0393.2 protein.
Length = 585
Score = 62.9 bits (146), Expect = 2e-10
Identities = 35/110 (31%), Positives = 58/110 (52%), Gaps = 7/110 (6%)
Frame = +2
Query: 158 LQKLAFNGIPDDKGLRSLVWKILLHYLPQEKNARETTLIKKRQLYKQFIEEIIVSPGGPT 337
L ++A +G RS VW+++L LP E + E +L + R LY+ E ++ P
Sbjct: 31 LARVAASGSLRSSSCRSAVWRLVLRCLPYETSDWEISLSRSRNLYRAHKENHLIDPHDTK 90
Query: 338 -------DHPLNMSPDSSWSTYFKDNEVLLQIDKDVRRLCPDISFFQSAT 466
++PL + W+T+F+DN++ I KDV R P+I FFQ+ +
Sbjct: 91 FSQDPEFNNPLASIEQNPWNTFFEDNDLRDIIGKDVSRTFPEIEFFQNTS 140
>Z81074-7|CAB03042.1| 495|Caenorhabditis elegans Hypothetical
protein F32B6.8b protein.
Length = 495
Score = 40.7 bits (91), Expect = 0.001
Identities = 32/105 (30%), Positives = 49/105 (46%)
Frame = +2
Query: 143 IDMQQLQKLAFNGIPDDKGLRSLVWKILLHYLPQEKNARETTLIKKRQLYKQFIEEIIVS 322
+D+++L++ + GIP LR W++L YLP RE TL KR Y ++E+ S
Sbjct: 181 VDLEKLREDCWMGIPHK--LRPQAWRLLSGYLPTNAERREVTLQCKRDEYWHYVEQYFHS 238
Query: 323 PGGPTDHPLNMSPDSSWSTYFKDNEVLLQIDKDVRRLCPDISFFQ 457
D + T+ QI+ D+ R+CP I FQ
Sbjct: 239 ----------RFDDQNADTF-------RQINIDIPRMCPLIPLFQ 266
Score = 32.7 bits (71), Expect = 0.28
Identities = 12/28 (42%), Positives = 21/28 (75%)
Frame = +3
Query: 654 RLTGEVVERMLFLYAKLNPGQGYVQGMN 737
++ E+ ER+L+++A +P GYVQG+N
Sbjct: 268 KMVQEMFERILYIWAIRHPASGYVQGIN 295
>Z81074-6|CAE46669.1| 475|Caenorhabditis elegans Hypothetical
protein F32B6.8a protein.
Length = 475
Score = 40.7 bits (91), Expect = 0.001
Identities = 32/105 (30%), Positives = 49/105 (46%)
Frame = +2
Query: 143 IDMQQLQKLAFNGIPDDKGLRSLVWKILLHYLPQEKNARETTLIKKRQLYKQFIEEIIVS 322
+D+++L++ + GIP LR W++L YLP RE TL KR Y ++E+ S
Sbjct: 161 VDLEKLREDCWMGIPHK--LRPQAWRLLSGYLPTNAERREVTLQCKRDEYWHYVEQYFHS 218
Query: 323 PGGPTDHPLNMSPDSSWSTYFKDNEVLLQIDKDVRRLCPDISFFQ 457
D + T+ QI+ D+ R+CP I FQ
Sbjct: 219 ----------RFDDQNADTF-------RQINIDIPRMCPLIPLFQ 246
Score = 32.7 bits (71), Expect = 0.28
Identities = 12/28 (42%), Positives = 21/28 (75%)
Frame = +3
Query: 654 RLTGEVVERMLFLYAKLNPGQGYVQGMN 737
++ E+ ER+L+++A +P GYVQG+N
Sbjct: 248 KMVQEMFERILYIWAIRHPASGYVQGIN 275
>AF003145-6|AAK68678.1| 1420|Caenorhabditis elegans Mtk1/mekk4
homolog protein 1, isoformb protein.
Length = 1420
Score = 30.3 bits (65), Expect = 1.5
Identities = 18/49 (36%), Positives = 28/49 (57%)
Frame = +2
Query: 482 EVVNSNGIKRLHKRVEQSVLKYATLERRGLGVAKLSNEIKRAENITSGD 628
E V +K++ R+ S +Y + RR LGVA +S +IKR ++ T D
Sbjct: 25 EAVRKTIMKKVATRMNTSKREY--MGRRSLGVATVSTKIKRKKSKTERD 71
>AF003145-5|AAB57718.1| 1418|Caenorhabditis elegans Mtk1/mekk4
homolog protein 1, isoforma protein.
Length = 1418
Score = 30.3 bits (65), Expect = 1.5
Identities = 18/49 (36%), Positives = 28/49 (57%)
Frame = +2
Query: 482 EVVNSNGIKRLHKRVEQSVLKYATLERRGLGVAKLSNEIKRAENITSGD 628
E V +K++ R+ S +Y + RR LGVA +S +IKR ++ T D
Sbjct: 25 EAVRKTIMKKVATRMNTSKREY--MGRRSLGVATVSTKIKRKKSKTERD 71
>AL032626-17|CAA21536.1| 282|Caenorhabditis elegans Hypothetical
protein Y37D8A.21 protein.
Length = 282
Score = 28.3 bits (60), Expect = 6.0
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -3
Query: 337 SWPSGRYNYFFYKLFIKLTFL 275
SW G + FF+ LF K+T+L
Sbjct: 256 SWAFGNFQCFFWNLFSKITYL 276
>AF045641-5|AAC02577.2| 554|Caenorhabditis elegans Hypothetical
protein F53H1.3 protein.
Length = 554
Score = 28.3 bits (60), Expect = 6.0
Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Frame = -3
Query: 598 DFVAKLGNTETPSLQCGVFED--GLLDTFVQSFYAIAVYDLRTRKFSSRLKE*YIGA 434
DF+A L PSL CG D GL F+ +R+R +++LK Y+ A
Sbjct: 425 DFLATLETNGGPSLTCGTKGDWQGLYRRFITCSNFGGWLSMRSRDVNAQLKTHYVEA 481
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,790,749
Number of Sequences: 27780
Number of extensions: 312563
Number of successful extensions: 846
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 812
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 844
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1735436670
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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