Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt4l19
(622 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC033515-1|AAH33515.1| 215|Homo sapiens LysM, putative peptidog... 78 3e-14
AY125955-1|AAM94507.1| 215|Homo sapiens putative peptidoglycan ... 78 3e-14
BC031649-1|AAH31649.1| 227|Homo sapiens LysM, putative peptidog... 69 2e-11
AL592424-6|CAI16380.1| 227|Homo sapiens LysM, putative peptidog... 69 2e-11
BC022075-1|AAH22075.1| 124|Homo sapiens LYSMD2 protein protein. 43 8e-04
BX537972-1|CAD97936.1| 345|Homo sapiens hypothetical protein pr... 40 0.007
BC084545-1|AAH84545.1| 296|Homo sapiens LYSMD4 protein protein. 32 1.9
>BC033515-1|AAH33515.1| 215|Homo sapiens LysM, putative
peptidoglycan-binding, domain containing 2 protein.
Length = 215
Score = 77.8 bits (183), Expect = 3e-14
Identities = 52/136 (38%), Positives = 70/136 (51%), Gaps = 16/136 (11%)
Frame = +2
Query: 170 EEYIKHVMSKGDTLQGIALKYGVTMEXIRRANRLFATDSLFLREYLLIPVTKDSPFYENG 349
E +++H + GDTLQGIALKYGVTME I+RAN+LF D +FL++ L IPV + P NG
Sbjct: 68 ERHVEHRVRAGDTLQGIALKYGVTMEQIKRANKLFTNDCIFLKKTLNIPVISEKPLLFNG 127
Query: 350 ERVXELPPPNHRAS----------XAG------MPTRNSFSPGSPDEKKSFDEFLNRVDS 481
+ P N A AG P + P P+E + D FL R+D
Sbjct: 128 LNSID-SPENETADNSFSQEEEPVVAGEDLPPPSPQESDVQPVQPEEVSARD-FLQRLDL 185
Query: 482 SLADXXRHVEKTKENS 529
+ + +K KE S
Sbjct: 186 QIKLSTQAAKKLKEES 201
>AY125955-1|AAM94507.1| 215|Homo sapiens putative peptidoglycan
binding domain protein-like protein protein.
Length = 215
Score = 77.8 bits (183), Expect = 3e-14
Identities = 52/136 (38%), Positives = 70/136 (51%), Gaps = 16/136 (11%)
Frame = +2
Query: 170 EEYIKHVMSKGDTLQGIALKYGVTMEXIRRANRLFATDSLFLREYLLIPVTKDSPFYENG 349
E +++H + GDTLQGIALKYGVTME I+RAN+LF D +FL++ L IPV + P NG
Sbjct: 68 ERHVEHRVRAGDTLQGIALKYGVTMEQIKRANKLFTNDCIFLKKTLNIPVISEKPLLFNG 127
Query: 350 ERVXELPPPNHRAS----------XAG------MPTRNSFSPGSPDEKKSFDEFLNRVDS 481
+ P N A AG P + P P+E + D FL R+D
Sbjct: 128 LNSID-SPENETADNSFSQEEEPVVAGEDLPPPSPQESDVQPVQPEEVSARD-FLQRLDL 185
Query: 482 SLADXXRHVEKTKENS 529
+ + +K KE S
Sbjct: 186 QIKLSTQAAKKLKEES 201
>BC031649-1|AAH31649.1| 227|Homo sapiens LysM, putative
peptidoglycan-binding, domain containing 1 protein.
Length = 227
Score = 68.5 bits (160), Expect = 2e-11
Identities = 31/60 (51%), Positives = 42/60 (70%)
Frame = +2
Query: 170 EEYIKHVMSKGDTLQGIALKYGVTMEXIRRANRLFATDSLFLREYLLIPVTKDSPFYENG 349
E ++H + GDTL G+ALKYGVTME I+RANRL+ DS+FL++ L IP+ + NG
Sbjct: 37 ERRLEHQLEPGDTLAGLALKYGVTMEQIKRANRLYTNDSIFLKKTLYIPILTEPRDLFNG 96
>AL592424-6|CAI16380.1| 227|Homo sapiens LysM, putative
peptidoglycan-binding, domain containing 1 protein.
Length = 227
Score = 68.5 bits (160), Expect = 2e-11
Identities = 31/60 (51%), Positives = 42/60 (70%)
Frame = +2
Query: 170 EEYIKHVMSKGDTLQGIALKYGVTMEXIRRANRLFATDSLFLREYLLIPVTKDSPFYENG 349
E ++H + GDTL G+ALKYGVTME I+RANRL+ DS+FL++ L IP+ + NG
Sbjct: 37 ERRLEHQLEPGDTLAGLALKYGVTMEQIKRANRLYTNDSIFLKKTLYIPILTEPRDLFNG 96
>BC022075-1|AAH22075.1| 124|Homo sapiens LYSMD2 protein protein.
Length = 124
Score = 43.2 bits (97), Expect = 8e-04
Identities = 36/112 (32%), Positives = 50/112 (44%), Gaps = 16/112 (14%)
Frame = +2
Query: 242 MEXIRRANRLFATDSLFLREYLLIPVTKDSPFYENGERVXELPPPNHRAS---------- 391
ME I+RAN+LF D +FL++ L IPV + P NG + P N A
Sbjct: 1 MEQIKRANKLFTNDCIFLKKTLNIPVISEKPLLFNGLNSID-SPENETADNSFSQEEEPV 59
Query: 392 XAG------MPTRNSFSPGSPDEKKSFDEFLNRVDSSLADXXRHVEKTKENS 529
AG P + P P+E + D FL R+D + + +K KE S
Sbjct: 60 VAGEDLPPPSPQESDVQPVQPEEVSARD-FLQRLDLQIKLSTQAAKKLKEES 110
>BX537972-1|CAD97936.1| 345|Homo sapiens hypothetical protein
protein.
Length = 345
Score = 39.9 bits (89), Expect = 0.007
Identities = 37/136 (27%), Positives = 54/136 (39%), Gaps = 8/136 (5%)
Frame = +2
Query: 191 MSKGDTLQGIALKYGVTMEXIRRANRLFATDSLFLREYLLIPVTKDSPFYENGERVXELP 370
+ +GDTL IAL+Y T+ I+R N L + F + IPV K S E L
Sbjct: 108 IQEGDTLNAIALQYCCTVADIKRVNNLISDQDFFALRSIKIPVKKFSSLTET------LC 161
Query: 371 PPNHR-----ASXAGMPTRNSFSPGSPD--EKKSFDEFLNRVDSSLADXXRHVEKTKEN- 526
PP R +S + P + S FL VD + + + +EN
Sbjct: 162 PPKGRQTSRHSSVQYSSEQQEILPANDSLAYSDSAGSFLKEVDRDIEQIVKCTDNKRENL 221
Query: 527 SEFVKDIDEGYVRHRP 574
+E V + +R P
Sbjct: 222 NEVVSALTAQQMRFEP 237
>BC084545-1|AAH84545.1| 296|Homo sapiens LYSMD4 protein protein.
Length = 296
Score = 31.9 bits (69), Expect = 1.9
Identities = 19/104 (18%), Positives = 43/104 (41%), Gaps = 1/104 (0%)
Frame = +2
Query: 179 IKHVMSKGDTLQGIALKYGVTMEXIRRANRLFATDSLFLREYLLIPVTKDSPFYENGERV 358
++ +++ D+L +AL+YG + I++ N L+ + + IPV E + +
Sbjct: 74 LQRELAQEDSLNKLALQYGCKVADIKKVNNFIREQDLYALKSVKIPVRNHGILMETHKEL 133
Query: 359 XELPPPNHRAS-XAGMPTRNSFSPGSPDEKKSFDEFLNRVDSSL 487
L P+ + +P + G+ + F +D +
Sbjct: 134 KPLLSPSSETTVTVELPEADRAGAGTGAQAGQLMGFFKGIDQDI 177
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,679,325
Number of Sequences: 237096
Number of extensions: 1229651
Number of successful extensions: 2741
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2686
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2741
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6691573490
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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