Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt4l16
(735 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z22175-2|CAA80131.2| 520|Caenorhabditis elegans Hypothetical pr... 60 2e-09
Z11115-20|CAA77460.2| 520|Caenorhabditis elegans Hypothetical p... 60 2e-09
Z47810-7|CAH10843.1| 538|Caenorhabditis elegans Hypothetical pr... 33 0.21
Z47810-6|CAB76718.1| 504|Caenorhabditis elegans Hypothetical pr... 33 0.21
U12965-9|AAA20605.3| 522|Caenorhabditis elegans Hypothetical pr... 33 0.21
U12965-7|AAY86205.1| 528|Caenorhabditis elegans Hypothetical pr... 33 0.21
AL031264-3|CAH04705.1| 538|Caenorhabditis elegans Hypothetical ... 33 0.21
AL031264-2|CAB76735.1| 504|Caenorhabditis elegans Hypothetical ... 33 0.21
Z69788-8|CAA93644.3| 483|Caenorhabditis elegans Hypothetical pr... 33 0.28
U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical pr... 32 0.37
U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical pr... 32 0.37
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 32 0.37
Z99709-5|CAB16860.1| 246|Caenorhabditis elegans Hypothetical pr... 29 3.4
AY874872-1|AAX62733.1| 1668|Caenorhabditis elegans chitin syntha... 29 4.5
AF026210-2|AAB71283.2| 1668|Caenorhabditis elegans Chitin syntha... 29 4.5
Z83228-10|CAB05732.2| 585|Caenorhabditis elegans Hypothetical p... 28 7.9
Z83228-1|CAC70093.1| 568|Caenorhabditis elegans Hypothetical pr... 28 7.9
AF110415-1|AAF21932.1| 568|Caenorhabditis elegans organic catio... 28 7.9
>Z22175-2|CAA80131.2| 520|Caenorhabditis elegans Hypothetical
protein ZK637.1 protein.
Length = 520
Score = 60.1 bits (139), Expect = 2e-09
Identities = 25/93 (26%), Positives = 53/93 (56%), Gaps = 1/93 (1%)
Frame = +2
Query: 368 EKGSNSEKA-DFERAIELTGYGRFHYMLLAVCGLVSTSEEMDVISMSFILPSAQCDLDLT 544
++ +SEK + A+E G+GRF L + G+ ++ M+++ +S I P+ C+ ++
Sbjct: 58 QRSPDSEKTFTVDEAVEALGFGRFQLKLSILTGMAWMADAMEMMLLSLISPALACEWGIS 117
Query: 545 TQTKGWLNSIIFIGMMVGAYAWGSVADSLGRKR 643
+ + + + +F GMM+ + WG + D GR++
Sbjct: 118 SVQQALVTTCVFSGMMLSSTFWGKICDRFGRRK 150
>Z11115-20|CAA77460.2| 520|Caenorhabditis elegans Hypothetical
protein ZK637.1 protein.
Length = 520
Score = 60.1 bits (139), Expect = 2e-09
Identities = 25/93 (26%), Positives = 53/93 (56%), Gaps = 1/93 (1%)
Frame = +2
Query: 368 EKGSNSEKA-DFERAIELTGYGRFHYMLLAVCGLVSTSEEMDVISMSFILPSAQCDLDLT 544
++ +SEK + A+E G+GRF L + G+ ++ M+++ +S I P+ C+ ++
Sbjct: 58 QRSPDSEKTFTVDEAVEALGFGRFQLKLSILTGMAWMADAMEMMLLSLISPALACEWGIS 117
Query: 545 TQTKGWLNSIIFIGMMVGAYAWGSVADSLGRKR 643
+ + + + +F GMM+ + WG + D GR++
Sbjct: 118 SVQQALVTTCVFSGMMLSSTFWGKICDRFGRRK 150
>Z47810-7|CAH10843.1| 538|Caenorhabditis elegans Hypothetical
protein F45E10.2b protein.
Length = 538
Score = 33.1 bits (72), Expect = 0.21
Identities = 13/33 (39%), Positives = 22/33 (66%), Gaps = 4/33 (12%)
Frame = +2
Query: 557 GWLNSII----FIGMMVGAYAWGSVADSLGRKR 643
GW+ + + FIG M+G++ G +AD +GRK+
Sbjct: 143 GWIRATVQAVYFIGQMIGSFTCGVMADKIGRKK 175
>Z47810-6|CAB76718.1| 504|Caenorhabditis elegans Hypothetical
protein F45E10.2a protein.
Length = 504
Score = 33.1 bits (72), Expect = 0.21
Identities = 13/33 (39%), Positives = 22/33 (66%), Gaps = 4/33 (12%)
Frame = +2
Query: 557 GWLNSII----FIGMMVGAYAWGSVADSLGRKR 643
GW+ + + FIG M+G++ G +AD +GRK+
Sbjct: 109 GWIRATVQAVYFIGQMIGSFTCGVMADKIGRKK 141
>U12965-9|AAA20605.3| 522|Caenorhabditis elegans Hypothetical
protein F23F12.3 protein.
Length = 522
Score = 33.1 bits (72), Expect = 0.21
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +2
Query: 560 WLNSIIFIGMMVGAYAWGSVADSLGRK 640
W+ +I FIG +VGA +G + D GRK
Sbjct: 98 WIATIQFIGALVGALVYGHLGDHFGRK 124
>U12965-7|AAY86205.1| 528|Caenorhabditis elegans Hypothetical
protein F23F12.13 protein.
Length = 528
Score = 33.1 bits (72), Expect = 0.21
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +2
Query: 560 WLNSIIFIGMMVGAYAWGSVADSLGRK 640
W+ +I FIG+++GA +G + D GRK
Sbjct: 98 WVATIQFIGVLIGAITYGHLGDHFGRK 124
>AL031264-3|CAH04705.1| 538|Caenorhabditis elegans Hypothetical
protein F45E10.2b protein.
Length = 538
Score = 33.1 bits (72), Expect = 0.21
Identities = 13/33 (39%), Positives = 22/33 (66%), Gaps = 4/33 (12%)
Frame = +2
Query: 557 GWLNSII----FIGMMVGAYAWGSVADSLGRKR 643
GW+ + + FIG M+G++ G +AD +GRK+
Sbjct: 143 GWIRATVQAVYFIGQMIGSFTCGVMADKIGRKK 175
>AL031264-2|CAB76735.1| 504|Caenorhabditis elegans Hypothetical
protein F45E10.2a protein.
Length = 504
Score = 33.1 bits (72), Expect = 0.21
Identities = 13/33 (39%), Positives = 22/33 (66%), Gaps = 4/33 (12%)
Frame = +2
Query: 557 GWLNSII----FIGMMVGAYAWGSVADSLGRKR 643
GW+ + + FIG M+G++ G +AD +GRK+
Sbjct: 109 GWIRATVQAVYFIGQMIGSFTCGVMADKIGRKK 141
>Z69788-8|CAA93644.3| 483|Caenorhabditis elegans Hypothetical
protein F09A5.1 protein.
Length = 483
Score = 32.7 bits (71), Expect = 0.28
Identities = 15/70 (21%), Positives = 33/70 (47%)
Frame = +2
Query: 431 RFHYMLLAVCGLVSTSEEMDVISMSFILPSAQCDLDLTTQTKGWLNSIIFIGMMVGAYAW 610
R Y+ + + +V+ +D +++ +LP Q ++ G + ++ I M+G+
Sbjct: 5 RKDYISIVILFVVNLINNVDRYTIAGVLPDVQSYYNINDSMGGMIQTVFLISFMIGSPIC 64
Query: 611 GSVADSLGRK 640
G + D RK
Sbjct: 65 GYLGDRFNRK 74
>U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical
protein K06A9.1c protein.
Length = 825
Score = 32.3 bits (70), Expect = 0.37
Identities = 27/93 (29%), Positives = 41/93 (44%)
Frame = -1
Query: 429 PYPVSSIARSKSAFSELEPFSGSDFDFLTEGTTPSSAVLEPGPFSCRSPFTSQL*GFLGP 250
P P SS S S SG+ G+T S+ + PG S + T + P
Sbjct: 118 PVPGSSSTIGSSTPSASSSSSGTMSTI--SGSTGSTVTVVPGSSSTFASSTP-IASSSSP 174
Query: 249 GSVSTILCGRAALYGGRGDTQTSLTGGSGATNS 151
GS T+ G ++ YG + +S + G+ +TNS
Sbjct: 175 GSTVTVAPGSSSTYGSSTPSASSSSSGTMSTNS 207
>U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical
protein K06A9.1a protein.
Length = 1032
Score = 32.3 bits (70), Expect = 0.37
Identities = 27/93 (29%), Positives = 41/93 (44%)
Frame = -1
Query: 429 PYPVSSIARSKSAFSELEPFSGSDFDFLTEGTTPSSAVLEPGPFSCRSPFTSQL*GFLGP 250
P P SS S S SG+ G+T S+ + PG S + T + P
Sbjct: 325 PVPGSSSTIGSSTPSASSSSSGTMSTI--SGSTGSTVTVVPGSSSTFASSTP-IASSSSP 381
Query: 249 GSVSTILCGRAALYGGRGDTQTSLTGGSGATNS 151
GS T+ G ++ YG + +S + G+ +TNS
Sbjct: 382 GSTVTVAPGSSSTYGSSTPSASSSSSGTMSTNS 414
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical
protein K06A9.1b protein.
Length = 2232
Score = 32.3 bits (70), Expect = 0.37
Identities = 27/93 (29%), Positives = 41/93 (44%)
Frame = -1
Query: 429 PYPVSSIARSKSAFSELEPFSGSDFDFLTEGTTPSSAVLEPGPFSCRSPFTSQL*GFLGP 250
P P SS S S SG+ G+T S+ + PG S + T + P
Sbjct: 325 PVPGSSSTIGSSTPSASSSSSGTMSTI--SGSTGSTVTVVPGSSSTFASSTP-IASSSSP 381
Query: 249 GSVSTILCGRAALYGGRGDTQTSLTGGSGATNS 151
GS T+ G ++ YG + +S + G+ +TNS
Sbjct: 382 GSTVTVAPGSSSTYGSSTPSASSSSSGTMSTNS 414
>Z99709-5|CAB16860.1| 246|Caenorhabditis elegans Hypothetical
protein C47B2.5 protein.
Length = 246
Score = 29.1 bits (62), Expect = 3.4
Identities = 18/54 (33%), Positives = 24/54 (44%)
Frame = +2
Query: 404 RAIELTGYGRFHYMLLAVCGLVSTSEEMDVISMSFILPSAQCDLDLTTQTKGWL 565
R EL G G +A CGL STS E+ V+ F L ++ Q + L
Sbjct: 188 RGSELIGAGMVVNDWVAFCGLDSTSTELSVVESIFKLGEQGAPTSISNQLRDTL 241
>AY874872-1|AAX62733.1| 1668|Caenorhabditis elegans chitin synthase 2
protein.
Length = 1668
Score = 28.7 bits (61), Expect = 4.5
Identities = 12/42 (28%), Positives = 17/42 (40%)
Frame = -3
Query: 265 RILGPRVSFYHPMRAGGFVWWSRGHSNVSHWGEWRYQQRIAC 140
R LG HP G VW+ + + HW + + I C
Sbjct: 887 RRLGAACGRIHPRGDGAMVWYQKFEYAIGHWLQKATEHMIGC 928
>AF026210-2|AAB71283.2| 1668|Caenorhabditis elegans Chitin synthase
protein 2 protein.
Length = 1668
Score = 28.7 bits (61), Expect = 4.5
Identities = 12/42 (28%), Positives = 17/42 (40%)
Frame = -3
Query: 265 RILGPRVSFYHPMRAGGFVWWSRGHSNVSHWGEWRYQQRIAC 140
R LG HP G VW+ + + HW + + I C
Sbjct: 887 RRLGAACGRIHPRGDGAMVWYQKFEYAIGHWLQKATEHMIGC 928
>Z83228-10|CAB05732.2| 585|Caenorhabditis elegans Hypothetical
protein F52F12.1a protein.
Length = 585
Score = 27.9 bits (59), Expect = 7.9
Identities = 14/50 (28%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
Frame = +2
Query: 503 SFILPSAQCDLDLTTQTKGWLN---SIIFIGMMVGAYAWGSVADSLGRKR 643
S L S + +L + W+ + ++G +G +G VAD GR+R
Sbjct: 134 STYLDSLVTEFNLVCDQQAWIEISTTSFYVGSFIGNCLFGYVADKFGRRR 183
>Z83228-1|CAC70093.1| 568|Caenorhabditis elegans Hypothetical
protein F52F12.1b protein.
Length = 568
Score = 27.9 bits (59), Expect = 7.9
Identities = 14/50 (28%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
Frame = +2
Query: 503 SFILPSAQCDLDLTTQTKGWLN---SIIFIGMMVGAYAWGSVADSLGRKR 643
S L S + +L + W+ + ++G +G +G VAD GR+R
Sbjct: 117 STYLDSLVTEFNLVCDQQAWIEISTTSFYVGSFIGNCLFGYVADKFGRRR 166
>AF110415-1|AAF21932.1| 568|Caenorhabditis elegans organic cation
transporter 1 protein.
Length = 568
Score = 27.9 bits (59), Expect = 7.9
Identities = 14/50 (28%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
Frame = +2
Query: 503 SFILPSAQCDLDLTTQTKGWLN---SIIFIGMMVGAYAWGSVADSLGRKR 643
S L S + +L + W+ + ++G +G +G VAD GR+R
Sbjct: 117 STYLDSLVTEFNLVCDQQAWIEISTTSFYVGSFIGNCLFGYVADKFGRRR 166
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,428,063
Number of Sequences: 27780
Number of extensions: 389946
Number of successful extensions: 1105
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1039
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1103
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1724918872
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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