Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt4l10
(740 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 27 0.14
DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex det... 27 0.14
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 27 0.14
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 27 0.14
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 27 0.14
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 27 0.14
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 27 0.14
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 27 0.14
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 22 5.3
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 22 5.3
EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. 21 9.2
AF205594-1|AAQ13840.1| 156|Apis mellifera acid phosphatase prec... 21 9.2
AF004842-1|AAD01205.1| 598|Apis mellifera major royal jelly pro... 21 9.2
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 27.5 bits (58), Expect = 0.14
Identities = 19/72 (26%), Positives = 29/72 (40%), Gaps = 2/72 (2%)
Frame = +2
Query: 359 NNFNFENDKNVSVKILFQNWGNVWPGPKTFH--PSSVPLPIRQGYVPKGQAPPGKKANAE 532
NN+N+ N N + + N+ ++ P VP+PI G P P +
Sbjct: 87 NNYNYSNYNNYNNNNNYNNYKKLYYNINYIEQIPVPVPVPIYCGNFPSRPMGPWVPMQEQ 146
Query: 533 LMKIPNFLHLTP 568
IP F H+ P
Sbjct: 147 ---IPRFRHIGP 155
>DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 27.5 bits (58), Expect = 0.14
Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Frame = +2
Query: 359 NNFNFENDKNVSVKILFQNWGNVWPGPKTFH--PSSVPLPIRQGYVPKGQAPPGKKANAE 532
NN+N+ N N + + N+ ++ P VP+PI G P P G + +
Sbjct: 87 NNYNYSNYNNYNNNNNYNNYKKLYYNINYIEQIPIPVPVPIYCGNFP--PRPMGPWISIQ 144
Query: 533 LMKIPNFLHLTP 568
+IP F H+ P
Sbjct: 145 -EQIPRFRHIGP 155
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 27.5 bits (58), Expect = 0.14
Identities = 19/72 (26%), Positives = 29/72 (40%), Gaps = 2/72 (2%)
Frame = +2
Query: 359 NNFNFENDKNVSVKILFQNWGNVWPGPKTFH--PSSVPLPIRQGYVPKGQAPPGKKANAE 532
NN+N+ N N + + N+ ++ P VP+PI G P P +
Sbjct: 87 NNYNYSNYNNYNNNNNYNNYKKLYYNINYIEQIPVPVPVPIYCGNFPSRPMGPWVPMQEQ 146
Query: 533 LMKIPNFLHLTP 568
IP F H+ P
Sbjct: 147 ---IPRFRHIGP 155
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 27.5 bits (58), Expect = 0.14
Identities = 19/72 (26%), Positives = 29/72 (40%), Gaps = 2/72 (2%)
Frame = +2
Query: 359 NNFNFENDKNVSVKILFQNWGNVWPGPKTFH--PSSVPLPIRQGYVPKGQAPPGKKANAE 532
NN+N+ N N + + N+ ++ P VP+PI G P P +
Sbjct: 87 NNYNYSNYNNYNNNNNYNNYKKLYYNINYIEQIPVPVPVPIYCGNFPSRPMGPWVPMQEQ 146
Query: 533 LMKIPNFLHLTP 568
IP F H+ P
Sbjct: 147 ---IPRFRHIGP 155
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 27.5 bits (58), Expect = 0.14
Identities = 19/72 (26%), Positives = 29/72 (40%), Gaps = 2/72 (2%)
Frame = +2
Query: 359 NNFNFENDKNVSVKILFQNWGNVWPGPKTFH--PSSVPLPIRQGYVPKGQAPPGKKANAE 532
NN+N+ N N + + N+ ++ P VP+PI G P P +
Sbjct: 87 NNYNYSNYNNYNNNNNYNNYKKLYYNINYIEQIPVPVPVPIYCGNFPSRPMGPWVPMQEQ 146
Query: 533 LMKIPNFLHLTP 568
IP F H+ P
Sbjct: 147 ---IPRFRHIGP 155
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 27.5 bits (58), Expect = 0.14
Identities = 19/72 (26%), Positives = 29/72 (40%), Gaps = 2/72 (2%)
Frame = +2
Query: 359 NNFNFENDKNVSVKILFQNWGNVWPGPKTFH--PSSVPLPIRQGYVPKGQAPPGKKANAE 532
NN+N+ N N + + N+ ++ P VP+PI G P P +
Sbjct: 87 NNYNYSNYNNYNNNNNYNNYKKLYYNINYIEQIPVPVPVPIYCGNFPSRPMGPWVPMQEQ 146
Query: 533 LMKIPNFLHLTP 568
IP F H+ P
Sbjct: 147 ---IPRFRHIGP 155
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 27.5 bits (58), Expect = 0.14
Identities = 19/72 (26%), Positives = 29/72 (40%), Gaps = 2/72 (2%)
Frame = +2
Query: 359 NNFNFENDKNVSVKILFQNWGNVWPGPKTFH--PSSVPLPIRQGYVPKGQAPPGKKANAE 532
NN+N+ N N + + N+ ++ P VP+PI G P P +
Sbjct: 87 NNYNYSNYNNYNNNNNYNNYKKLYYNINYIEQIPVPVPVPIYCGNFPSRPMGPWVPMQEQ 146
Query: 533 LMKIPNFLHLTP 568
IP F H+ P
Sbjct: 147 ---IPRFRHIGP 155
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 27.5 bits (58), Expect = 0.14
Identities = 19/72 (26%), Positives = 29/72 (40%), Gaps = 2/72 (2%)
Frame = +2
Query: 359 NNFNFENDKNVSVKILFQNWGNVWPGPKTFH--PSSVPLPIRQGYVPKGQAPPGKKANAE 532
NN+N+ N N + + N+ ++ P VP+PI G P P +
Sbjct: 87 NNYNYSNYNNYNNNNNYNNYKKLYYNINYIEQIPVPVPVPIYCGNFPSRPMGPWVPMQEQ 146
Query: 533 LMKIPNFLHLTP 568
IP F H+ P
Sbjct: 147 ---IPRFRHIGP 155
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 22.2 bits (45), Expect = 5.3
Identities = 15/64 (23%), Positives = 23/64 (35%), Gaps = 1/64 (1%)
Frame = +2
Query: 389 VSVKILFQNWGNV-WPGPKTFHPSSVPLPIRQGYVPKGQAPPGKKANAELMKIPNFLHLT 565
V + F W V W G + S P + + +G PG + PN L+
Sbjct: 216 VWIMCYFCIWKGVKWTGKVVYFTSLFPYALLTILLIRGLTLPGAMEGLKYYVTPNLSKLS 275
Query: 566 PPVI 577
P +
Sbjct: 276 DPEV 279
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 22.2 bits (45), Expect = 5.3
Identities = 15/64 (23%), Positives = 23/64 (35%), Gaps = 1/64 (1%)
Frame = +2
Query: 389 VSVKILFQNWGNV-WPGPKTFHPSSVPLPIRQGYVPKGQAPPGKKANAELMKIPNFLHLT 565
V + F W V W G + S P + + +G PG + PN L+
Sbjct: 269 VWIMCYFCIWKGVKWTGKVVYFTSLFPYALLTILLIRGLTLPGAMEGLKYYVTPNLSKLS 328
Query: 566 PPVI 577
P +
Sbjct: 329 DPEV 332
>EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2
protein.
Length = 570
Score = 21.4 bits (43), Expect = 9.2
Identities = 6/10 (60%), Positives = 9/10 (90%)
Frame = +1
Query: 28 KWRFVTRCLQ 57
KWRF+ +CL+
Sbjct: 69 KWRFLLQCLE 78
>AF205594-1|AAQ13840.1| 156|Apis mellifera acid phosphatase
precursor protein.
Length = 156
Score = 21.4 bits (43), Expect = 9.2
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -1
Query: 416 SSGIIFLLIHFYRFRS*NYFLI 351
+S IIFLLI F F N+ L+
Sbjct: 131 NSTIIFLLIRFKSFSLLNFNLL 152
>AF004842-1|AAD01205.1| 598|Apis mellifera major royal jelly
protein MRJP5 protein.
Length = 598
Score = 21.4 bits (43), Expect = 9.2
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +3
Query: 210 LDILKKRDKMQRRVVKRTDVQPDRIDRM 293
+D + + D+M R T + DR+DRM
Sbjct: 387 MDRIDRMDRMDRMDTMDTMDRIDRMDRM 414
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 202,257
Number of Sequences: 438
Number of extensions: 4717
Number of successful extensions: 14
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23144850
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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