Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt4k16
(454 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC622.15c |||sequence orphan|Schizosaccharomyces pombe|chr 3||... 33 0.015
SPAC4F10.16c |||P-type ATPase |Schizosaccharomyces pombe|chr 1||... 30 0.14
SPCC1235.01 ||SPCC320.02c|sequence orphan|Schizosaccharomyces po... 28 0.58
SPBC21D10.06c |map4||cell agglutination protein Map4|Schizosacch... 28 0.77
SPBC1685.01 |pmp1||dual-specificity MAP kinase phosphatase Pmp1|... 27 1.8
SPAC9G1.02 |wis4|wak1, wik1|MAP kinase kinase kinase Wis4|Schizo... 27 1.8
SPBPB8B6.04c |grt1|SPAPB8B6.04c, SPAPB8B6.04c|transcription fact... 27 1.8
SPBC725.06c |ppk31|mug25|serine/threonine protein kinase Ppk31 |... 26 3.1
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 25 4.1
SPBC776.14 |plh1||phospholipid-diacylglycerol acyltransferase Pl... 25 5.4
SPBC1683.13c |||transcription factor |Schizosaccharomyces pombe|... 25 5.4
SPAC4D7.10c |||SAGA complex subunit Spt20 |Schizosaccharomyces p... 25 7.2
SPCC777.04 |||amino acid transporter |Schizosaccharomyces pombe|... 25 7.2
SPCP1E11.02 |ppk38||Ark1/Prk1 family protein kinase Ppk38|Schizo... 24 9.5
>SPCC622.15c |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 557
Score = 33.5 bits (73), Expect = 0.015
Identities = 24/73 (32%), Positives = 32/73 (43%), Gaps = 5/73 (6%)
Frame = +2
Query: 116 VENADSVRDAKKRYGGNGYEPIDNRPYIVNPPKD-YNPNG-NGYEPIDNGAYYVDPPQG- 286
V N V + YG N +++ Y P +D YN N N Y PI N Y+++ G
Sbjct: 85 VSNGFGVSRRETHYGNNRTYYKNSQGYRRKPKRDDYNNNRKNFYPPIQNSTYFINATGGI 144
Query: 287 --RPYFKPTPFPG 319
PYF PG
Sbjct: 145 DSMPYFGLNNAPG 157
>SPAC4F10.16c |||P-type ATPase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1367
Score = 30.3 bits (65), Expect = 0.14
Identities = 21/101 (20%), Positives = 40/101 (39%)
Frame = -1
Query: 355 NFLRYSLLPTASTRERGRLEVRSALGRVHVICTVVDRFVAVSIRVVIFGRINDVRAVVNR 176
NF ++P STR+R + +R G +H+IC D + + I + +
Sbjct: 756 NFRVLDIIPFTSTRKRMSVIIRDEDGIIHLICKGADTVIFPRLSSGQNNIIEKTKKHLAS 815
Query: 175 FVAVSTVTFFRVTN*VSVFHYLNWVLSVGHSQQSEDENHEE 53
F + T + YL W ++ + + E +E+
Sbjct: 816 FSSEGFRTLCIARRTIDKQDYLEWKVNFNEANSAIHERNEK 856
>SPCC1235.01 ||SPCC320.02c|sequence orphan|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 658
Score = 28.3 bits (60), Expect = 0.58
Identities = 15/53 (28%), Positives = 25/53 (47%)
Frame = +3
Query: 156 TVETATNLLTTARTSLILPKITTLMETATNLSTTVHITWTLPKADLTSSLPLS 314
TVET T + T + + TT+ + T + T T P + T+ LP++
Sbjct: 103 TVETTTTPMVETTTITPMVETTTITPMVEAMITLMEETMTTPMEETTTILPMA 155
>SPBC21D10.06c |map4||cell agglutination protein
Map4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 948
Score = 27.9 bits (59), Expect = 0.77
Identities = 16/50 (32%), Positives = 29/50 (58%)
Frame = +3
Query: 168 ATNLLTTARTSLILPKITTLMETATNLSTTVHITWTLPKADLTSSLPLSL 317
A+ L +++ T+ + P +T ET ++ S+ T T+ + TSS P+SL
Sbjct: 234 ASTLESSSLTNTVSPTESTFYETKSSTSSVP--TQTIDSSSFTSSTPVSL 281
>SPBC1685.01 |pmp1||dual-specificity MAP kinase phosphatase
Pmp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 278
Score = 26.6 bits (56), Expect = 1.8
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = +2
Query: 209 PKDYNPNGNGYEPIDNGAYYVDPPQGRPYFKPT 307
PK PN N +P NG + PP Y KPT
Sbjct: 46 PKASKPNSN--QPYPNGPVCIYPPNIYLYAKPT 76
>SPAC9G1.02 |wis4|wak1, wik1|MAP kinase kinase kinase
Wis4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1401
Score = 26.6 bits (56), Expect = 1.8
Identities = 10/36 (27%), Positives = 17/36 (47%)
Frame = +1
Query: 241 RTYRQRCILRGPSPRPTLLQAYPFPWCSRWEVKNIL 348
R + ++C R P RP + PW + + K I+
Sbjct: 1280 RDFIEQCFERDPEQRPRAVDLLTHPWITDFRKKTII 1315
>SPBPB8B6.04c |grt1|SPAPB8B6.04c, SPAPB8B6.04c|transcription factor
Grt1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 648
Score = 26.6 bits (56), Expect = 1.8
Identities = 19/62 (30%), Positives = 26/62 (41%)
Frame = +3
Query: 150 NVTVETATNLLTTARTSLILPKITTLMETATNLSTTVHITWTLPKADLTSSLPLSLVLAV 329
N+T E LL + +P E NLS TW P A + L L+L++
Sbjct: 156 NITTEKMNGLLIAYLETWHIPCPIFKAEDLFNLSVR---TWKNPSASVHDKALLYLILSI 212
Query: 330 GS 335
GS
Sbjct: 213 GS 214
>SPBC725.06c |ppk31|mug25|serine/threonine protein kinase Ppk31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1032
Score = 25.8 bits (54), Expect = 3.1
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +2
Query: 140 DAKKRYGGNGYEPIDNRPY 196
D KR G NGY+ I P+
Sbjct: 858 DCNKRLGSNGYQEIKKHPF 876
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 25.4 bits (53), Expect = 4.1
Identities = 20/71 (28%), Positives = 27/71 (38%)
Frame = +2
Query: 104 PVKVVENADSVRDAKKRYGGNGYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDPPQ 283
P V A + + N Y PI VNP Y P+G G+ V PP+
Sbjct: 962 PQSPVAAASRISSSPNMPPSNPYTPIAVASSTVNPAHTYKPHG--------GSQIVPPPK 1013
Query: 284 GRPYFKPTPFP 316
+P + P P
Sbjct: 1014 -QPANRVVPLP 1023
>SPBC776.14 |plh1||phospholipid-diacylglycerol acyltransferase
Plh1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 623
Score = 25.0 bits (52), Expect = 5.4
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +2
Query: 212 KDYNPNGNGYEPIDNGAYYVDPPQGRP 292
K Y +G G +P + G YY + P+G+P
Sbjct: 479 KIYCVHGVG-KPTERGYYYTNNPEGQP 504
>SPBC1683.13c |||transcription factor |Schizosaccharomyces pombe|chr
2|||Manual
Length = 618
Score = 25.0 bits (52), Expect = 5.4
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -2
Query: 453 FFFKHYNMFIYLFR*HKFI*NFEI 382
FF K Y+ F+++FR + FI +FE+
Sbjct: 188 FFLKQYHNFMFVFRDY-FIRDFEL 210
>SPAC4D7.10c |||SAGA complex subunit Spt20 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 473
Score = 24.6 bits (51), Expect = 7.2
Identities = 16/68 (23%), Positives = 25/68 (36%)
Frame = +2
Query: 107 VKVVENADSVRDAKKRYGGNGYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDPPQG 286
VK + +VR R + + + +P N + N N +P D PP
Sbjct: 117 VKFYDGCLTVRIIDHRQSPSADQTVQPQPGSTNQQQQNNTNPINNQPEDTKPNTNSPPVY 176
Query: 287 RPYFKPTP 310
+PTP
Sbjct: 177 HTVLRPTP 184
>SPCC777.04 |||amino acid transporter |Schizosaccharomyces pombe|chr
3|||Manual
Length = 521
Score = 24.6 bits (51), Expect = 7.2
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = -2
Query: 450 FFKHYNMFIYLFR*HKFI*NFEIYC*YIISLL 355
FF YN FI+ F+ FI ++ Y+I +L
Sbjct: 470 FFNGYNAFIHGFKYRSFITSYIGIAAYVIMIL 501
>SPCP1E11.02 |ppk38||Ark1/Prk1 family protein kinase
Ppk38|Schizosaccharomyces pombe|chr 3|||Manual
Length = 650
Score = 24.2 bits (50), Expect = 9.5
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +2
Query: 179 IDNRPYIVNPPKDYNPNGNGYEPIDNGAY 265
+++ PY+ N D+N NGN P+ +Y
Sbjct: 370 VNSMPYLSNG--DHNNNGNTSSPVSRFSY 396
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,816,949
Number of Sequences: 5004
Number of extensions: 39220
Number of successful extensions: 123
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 116
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 123
length of database: 2,362,478
effective HSP length: 67
effective length of database: 2,027,210
effective search space used: 168258430
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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