Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt4k16
(454 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68106-3|CAA92127.1| 74|Caenorhabditis elegans Hypothetical pr... 37 0.008
AF039047-13|AAM15587.1| 402|Caenorhabditis elegans Coexpressed ... 31 0.52
Z72504-5|CAA96602.2| 812|Caenorhabditis elegans Hypothetical pr... 30 0.69
U28941-5|AAM98026.2| 989|Caenorhabditis elegans Hypothetical pr... 30 0.91
AY314775-1|AAQ84882.1| 971|Caenorhabditis elegans methuselah-li... 30 0.91
U50301-10|AAV28351.1| 513|Caenorhabditis elegans Hypothetical p... 29 1.2
AF039717-4|AAO21385.1| 303|Caenorhabditis elegans Abnormal daue... 29 2.1
AF039717-3|AAK82917.1| 530|Caenorhabditis elegans Abnormal daue... 29 2.1
AF039717-2|AAK82918.1| 508|Caenorhabditis elegans Abnormal daue... 29 2.1
AF039717-1|AAK82919.1| 510|Caenorhabditis elegans Abnormal daue... 29 2.1
AF032112-1|AAC47803.1| 510|Caenorhabditis elegans DAF-16 protein. 29 2.1
AF020344-1|AAB84392.1| 530|Caenorhabditis elegans fork head-rel... 29 2.1
AF020343-1|AAB84391.1| 508|Caenorhabditis elegans fork head-rel... 29 2.1
AF020342-1|AAB84390.1| 510|Caenorhabditis elegans fork head-rel... 29 2.1
Z72504-4|CAH60755.1| 653|Caenorhabditis elegans Hypothetical pr... 28 2.8
X91045-1|CAA62505.1| 693|Caenorhabditis elegans let-653 protein. 28 2.8
U39678-12|AAK39209.2| 1185|Caenorhabditis elegans Hypothetical p... 28 2.8
U40029-3|AAA81124.1| 269|Caenorhabditis elegans Hypothetical pr... 28 3.7
Z92773-4|CAB07130.2| 584|Caenorhabditis elegans Hypothetical pr... 27 4.8
Z81114-8|CAB97236.1| 584|Caenorhabditis elegans Hypothetical pr... 27 4.8
Z75711-1|CAB00032.1| 196|Caenorhabditis elegans Hypothetical pr... 27 4.8
Z68748-6|CAD27621.1| 88|Caenorhabditis elegans Hypothetical pr... 27 4.8
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 27 4.8
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 27 4.8
Z70753-10|CAD44125.1| 296|Caenorhabditis elegans Hypothetical p... 27 6.4
Z70753-1|CAD44126.1| 296|Caenorhabditis elegans Hypothetical pr... 27 6.4
Z54236-4|CAA90984.1| 1274|Caenorhabditis elegans Hypothetical pr... 27 6.4
AF025471-4|AAB71063.1| 151|Caenorhabditis elegans Hypothetical ... 27 6.4
Z81082-6|CAB03098.1| 279|Caenorhabditis elegans Hypothetical pr... 27 8.4
Z75542-6|CAA99864.3| 552|Caenorhabditis elegans Hypothetical pr... 27 8.4
Z75538-3|CAA99842.3| 552|Caenorhabditis elegans Hypothetical pr... 27 8.4
AL034543-5|CAA22519.1| 279|Caenorhabditis elegans Hypothetical ... 27 8.4
AL034543-1|CAA22516.1| 243|Caenorhabditis elegans Hypothetical ... 27 8.4
AF002198-10|AAF99937.1| 471|Caenorhabditis elegans Hypothetical... 27 8.4
>Z68106-3|CAA92127.1| 74|Caenorhabditis elegans Hypothetical
protein F41E7.4 protein.
Length = 74
Score = 36.7 bits (81), Expect = 0.008
Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = +2
Query: 47 MKFFMIFVLALLAMANAQDPVKVVENADSVRDAKKRYGGNGY-EPIDNRPYIVNPPKDYN 223
M F F+LA+LA+A P +V+E +R +GG G+ P RP PP +
Sbjct: 1 MNFVTFFLLAVLAVAALAAPQRVIEKTTVIRGGGGGFGGGGFGRPAPFRP----PPPRFG 56
Query: 224 PN 229
P+
Sbjct: 57 PS 58
>AF039047-13|AAM15587.1| 402|Caenorhabditis elegans Coexpressed
with polycystins protein4 protein.
Length = 402
Score = 30.7 bits (66), Expect = 0.52
Identities = 23/83 (27%), Positives = 37/83 (44%), Gaps = 3/83 (3%)
Frame = +3
Query: 75 LCWLWPTLKTQLR*WKTLTQFVTRKNVTVETATNLLTTARTSLILPKITTLMETATNLST 254
LC+LW L T T T T T+ + T T++++ TT +T
Sbjct: 179 LCYLWVPLTT-----------TTTTTTTTTTTTSPMNTTTTTVLINGTTTTTVPTNETTT 227
Query: 255 TVHI---TWTLPKADLTSSLPLS 314
TV + T T+P + T++ PL+
Sbjct: 228 TVPLNGTTTTVPTNETTTTSPLN 250
>Z72504-5|CAA96602.2| 812|Caenorhabditis elegans Hypothetical
protein C29E6.1a protein.
Length = 812
Score = 30.3 bits (65), Expect = 0.69
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 5/65 (7%)
Frame = +3
Query: 129 TQFVTRKNVTVETATNLLTT----ARTSLILPKITTLMETATNLSTTVHITWTLP-KADL 293
TQ + TV+T+T + TT T+ PK TT ETAT S+T +T P
Sbjct: 490 TQKIDVPTTTVQTSTTVPTTPSKTTATTTTTPKPTT-TETATTSSSTTTVTTQKPTTVTS 548
Query: 294 TSSLP 308
T++LP
Sbjct: 549 TTTLP 553
>U28941-5|AAM98026.2| 989|Caenorhabditis elegans Hypothetical
protein F31D5.4 protein.
Length = 989
Score = 29.9 bits (64), Expect = 0.91
Identities = 21/63 (33%), Positives = 27/63 (42%), Gaps = 3/63 (4%)
Frame = +3
Query: 123 TLTQFVTRKNVT---VETATNLLTTARTSLILPKITTLMETATNLSTTVHITWTLPKADL 293
T+T VT VT V T T + T T+ +T T T ST+ H T +
Sbjct: 258 TVTSIVTSTTVTSTTVPTTTVVTTVPTTTATSTSTSTASTTTTTPSTSTHTTTVTYSTNA 317
Query: 294 TSS 302
TSS
Sbjct: 318 TSS 320
>AY314775-1|AAQ84882.1| 971|Caenorhabditis elegans methuselah-like
protein MTH-2 protein.
Length = 971
Score = 29.9 bits (64), Expect = 0.91
Identities = 21/63 (33%), Positives = 27/63 (42%), Gaps = 3/63 (4%)
Frame = +3
Query: 123 TLTQFVTRKNVT---VETATNLLTTARTSLILPKITTLMETATNLSTTVHITWTLPKADL 293
T+T VT VT V T T + T T+ +T T T ST+ H T +
Sbjct: 240 TVTSIVTSTTVTSTTVPTTTVVTTVPTTTATSTSTSTASTTTTTPSTSTHTTTVTYSTNA 299
Query: 294 TSS 302
TSS
Sbjct: 300 TSS 302
>U50301-10|AAV28351.1| 513|Caenorhabditis elegans Hypothetical
protein F20D6.12 protein.
Length = 513
Score = 29.5 bits (63), Expect = 1.2
Identities = 14/56 (25%), Positives = 26/56 (46%)
Frame = -1
Query: 268 VICTVVDRFVAVSIRVVIFGRINDVRAVVNRFVAVSTVTFFRVTN*VSVFHYLNWV 101
+ C + ++VV + N+ + + +S + +F VT +FHY NWV
Sbjct: 25 IFCIPATIHYIIVLKVVSHLKENNSFLFIFTILGISDIFYFVVTLLCELFHYTNWV 80
>AF039717-4|AAO21385.1| 303|Caenorhabditis elegans Abnormal dauer
formation protein16, isoform e protein.
Length = 303
Score = 28.7 bits (61), Expect = 2.1
Identities = 23/80 (28%), Positives = 31/80 (38%), Gaps = 5/80 (6%)
Frame = +2
Query: 104 PVKVVENADSVR-DAKKRYGG----NGYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYY 268
P +V+ D +R DA GG +PI P + PP Y+ +
Sbjct: 144 PSDIVDRTDQMRIDATTHIGGVQIKQESKPIKTEP--IAPPPSYHELNSVRGSCAQNPLL 201
Query: 269 VDPPQGRPYFKPTPFPGARG 328
+P FKP P PGA G
Sbjct: 202 RNPIVPSTNFKPMPLPGAYG 221
>AF039717-3|AAK82917.1| 530|Caenorhabditis elegans Abnormal dauer
formation protein16, isoform a protein.
Length = 530
Score = 28.7 bits (61), Expect = 2.1
Identities = 23/80 (28%), Positives = 31/80 (38%), Gaps = 5/80 (6%)
Frame = +2
Query: 104 PVKVVENADSVR-DAKKRYGG----NGYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYY 268
P +V+ D +R DA GG +PI P + PP Y+ +
Sbjct: 371 PSDIVDRTDQMRIDATTHIGGVQIKQESKPIKTEP--IAPPPSYHELNSVRGSCAQNPLL 428
Query: 269 VDPPQGRPYFKPTPFPGARG 328
+P FKP P PGA G
Sbjct: 429 RNPIVPSTNFKPMPLPGAYG 448
>AF039717-2|AAK82918.1| 508|Caenorhabditis elegans Abnormal dauer
formation protein16, isoform b protein.
Length = 508
Score = 28.7 bits (61), Expect = 2.1
Identities = 23/80 (28%), Positives = 31/80 (38%), Gaps = 5/80 (6%)
Frame = +2
Query: 104 PVKVVENADSVR-DAKKRYGG----NGYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYY 268
P +V+ D +R DA GG +PI P + PP Y+ +
Sbjct: 349 PSDIVDRTDQMRIDATTHIGGVQIKQESKPIKTEP--IAPPPSYHELNSVRGSCAQNPLL 406
Query: 269 VDPPQGRPYFKPTPFPGARG 328
+P FKP P PGA G
Sbjct: 407 RNPIVPSTNFKPMPLPGAYG 426
>AF039717-1|AAK82919.1| 510|Caenorhabditis elegans Abnormal dauer
formation protein16, isoform c protein.
Length = 510
Score = 28.7 bits (61), Expect = 2.1
Identities = 23/80 (28%), Positives = 31/80 (38%), Gaps = 5/80 (6%)
Frame = +2
Query: 104 PVKVVENADSVR-DAKKRYGG----NGYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYY 268
P +V+ D +R DA GG +PI P + PP Y+ +
Sbjct: 351 PSDIVDRTDQMRIDATTHIGGVQIKQESKPIKTEP--IAPPPSYHELNSVRGSCAQNPLL 408
Query: 269 VDPPQGRPYFKPTPFPGARG 328
+P FKP P PGA G
Sbjct: 409 RNPIVPSTNFKPMPLPGAYG 428
>AF032112-1|AAC47803.1| 510|Caenorhabditis elegans DAF-16 protein.
Length = 510
Score = 28.7 bits (61), Expect = 2.1
Identities = 23/80 (28%), Positives = 31/80 (38%), Gaps = 5/80 (6%)
Frame = +2
Query: 104 PVKVVENADSVR-DAKKRYGG----NGYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYY 268
P +V+ D +R DA GG +PI P + PP Y+ +
Sbjct: 351 PSDIVDRTDQMRIDATTHIGGVQIKQESKPIKTEP--IAPPPSYHELNSVRGSCAQNPLL 408
Query: 269 VDPPQGRPYFKPTPFPGARG 328
+P FKP P PGA G
Sbjct: 409 RNPIVPSTNFKPMPLPGAYG 428
>AF020344-1|AAB84392.1| 530|Caenorhabditis elegans fork
head-related transcriptionfactor DAF-16b protein.
Length = 530
Score = 28.7 bits (61), Expect = 2.1
Identities = 23/80 (28%), Positives = 31/80 (38%), Gaps = 5/80 (6%)
Frame = +2
Query: 104 PVKVVENADSVR-DAKKRYGG----NGYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYY 268
P +V+ D +R DA GG +PI P + PP Y+ +
Sbjct: 371 PSDIVDRTDQMRIDATTHIGGVQIKQESKPIKTEP--IAPPPSYHELNSVRGSCAQNPLL 428
Query: 269 VDPPQGRPYFKPTPFPGARG 328
+P FKP P PGA G
Sbjct: 429 RNPIVPSTNFKPMPLPGAYG 448
>AF020343-1|AAB84391.1| 508|Caenorhabditis elegans fork
head-related transcriptionfactor DAF-16a2 protein.
Length = 508
Score = 28.7 bits (61), Expect = 2.1
Identities = 23/80 (28%), Positives = 31/80 (38%), Gaps = 5/80 (6%)
Frame = +2
Query: 104 PVKVVENADSVR-DAKKRYGG----NGYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYY 268
P +V+ D +R DA GG +PI P + PP Y+ +
Sbjct: 349 PSDIVDRTDQMRIDATTHIGGVQIKQESKPIKTEP--IAPPPSYHELNSVRGSCAQNPLL 406
Query: 269 VDPPQGRPYFKPTPFPGARG 328
+P FKP P PGA G
Sbjct: 407 RNPIVPSTNFKPMPLPGAYG 426
>AF020342-1|AAB84390.1| 510|Caenorhabditis elegans fork
head-related transcriptionfactor DAF-16a1 protein.
Length = 510
Score = 28.7 bits (61), Expect = 2.1
Identities = 23/80 (28%), Positives = 31/80 (38%), Gaps = 5/80 (6%)
Frame = +2
Query: 104 PVKVVENADSVR-DAKKRYGG----NGYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYY 268
P +V+ D +R DA GG +PI P + PP Y+ +
Sbjct: 351 PSDIVDRTDQMRIDATTHIGGVQIKQESKPIKTEP--IAPPPSYHELNSVRGSCAQNPLL 408
Query: 269 VDPPQGRPYFKPTPFPGARG 328
+P FKP P PGA G
Sbjct: 409 RNPIVPSTNFKPMPLPGAYG 428
>Z72504-4|CAH60755.1| 653|Caenorhabditis elegans Hypothetical
protein C29E6.1b protein.
Length = 653
Score = 28.3 bits (60), Expect = 2.8
Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 5/56 (8%)
Frame = +3
Query: 156 TVETATNLLTT----ARTSLILPKITTLMETATNLSTTVHITWTLP-KADLTSSLP 308
TV+T+T + TT T+ PK TT ETAT S+T +T P T++LP
Sbjct: 340 TVQTSTTVPTTPSKTTATTTTTPKPTT-TETATTSSSTTTVTTQKPTTVTSTTTLP 394
>X91045-1|CAA62505.1| 693|Caenorhabditis elegans let-653 protein.
Length = 693
Score = 28.3 bits (60), Expect = 2.8
Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 5/56 (8%)
Frame = +3
Query: 156 TVETATNLLTT----ARTSLILPKITTLMETATNLSTTVHITWTLP-KADLTSSLP 308
TV+T+T + TT T+ PK TT ETAT S+T +T P T++LP
Sbjct: 380 TVQTSTTVPTTPSKTTATTTTTPKPTT-TETATTSSSTTTVTTQKPTTVTSTTTLP 434
>U39678-12|AAK39209.2| 1185|Caenorhabditis elegans Hypothetical
protein C39D10.7 protein.
Length = 1185
Score = 28.3 bits (60), Expect = 2.8
Identities = 16/60 (26%), Positives = 20/60 (33%)
Frame = +2
Query: 125 ADSVRDAKKRYGGNGYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDPPQGRPYFKP 304
A + YG P+D PY Y+P Y P A +PP P P
Sbjct: 268 APKTTTSSSSYGSIAEAPVDPTPYAPASAPVYSPPRTTYVPRSTSAAPPNPPPQNPTAAP 327
>U40029-3|AAA81124.1| 269|Caenorhabditis elegans Hypothetical
protein F10G7.6 protein.
Length = 269
Score = 27.9 bits (59), Expect = 3.7
Identities = 14/30 (46%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Frame = +2
Query: 173 EPIDNRPYI-VNPPKDYNPNGNGYEPIDNG 259
EP D P + V PP + PN NG P NG
Sbjct: 239 EPDDPAPPLPVAPPPLHGPNNNGNGPAQNG 268
>Z92773-4|CAB07130.2| 584|Caenorhabditis elegans Hypothetical
protein W08E3.2 protein.
Length = 584
Score = 27.5 bits (58), Expect = 4.8
Identities = 20/64 (31%), Positives = 28/64 (43%)
Frame = +2
Query: 104 PVKVVENADSVRDAKKRYGGNGYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDPPQ 283
P + VE+ D AKKR GG+ E D + N + + ++N AY P
Sbjct: 39 PAESVEDDDEPAPAKKRSGGDSEEKEDEAAEDGPEDGEEKSNLDDDQNVENPAYI--PKT 96
Query: 284 GRPY 295
GR Y
Sbjct: 97 GRFY 100
>Z81114-8|CAB97236.1| 584|Caenorhabditis elegans Hypothetical
protein W08E3.2 protein.
Length = 584
Score = 27.5 bits (58), Expect = 4.8
Identities = 20/64 (31%), Positives = 28/64 (43%)
Frame = +2
Query: 104 PVKVVENADSVRDAKKRYGGNGYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDPPQ 283
P + VE+ D AKKR GG+ E D + N + + ++N AY P
Sbjct: 39 PAESVEDDDEPAPAKKRSGGDSEEKEDEAAEDGPEDGEEKSNLDDDQNVENPAYI--PKT 96
Query: 284 GRPY 295
GR Y
Sbjct: 97 GRFY 100
>Z75711-1|CAB00032.1| 196|Caenorhabditis elegans Hypothetical
protein K02B12.2 protein.
Length = 196
Score = 27.5 bits (58), Expect = 4.8
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +3
Query: 201 LILPKITTLMETATNLSTTVHITWTLPKAD 290
+I+ TT +++ T+LS + TW LPK D
Sbjct: 18 VIVNHYTTHVKSTTDLSKCGNCTWVLPKLD 47
>Z68748-6|CAD27621.1| 88|Caenorhabditis elegans Hypothetical
protein F13H10.6 protein.
Length = 88
Score = 27.5 bits (58), Expect = 4.8
Identities = 16/47 (34%), Positives = 19/47 (40%)
Frame = +2
Query: 170 YEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDPPQGRPYFKPTP 310
Y+P + P P P GY P G YY QG PY+ P
Sbjct: 3 YQPYNQPPPYTQQPGYPPPGSAGYVPQ-QGGYYPQGQQG-PYYPQQP 47
>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 27.5 bits (58), Expect = 4.8
Identities = 18/58 (31%), Positives = 26/58 (44%)
Frame = +3
Query: 126 LTQFVTRKNVTVETATNLLTTARTSLILPKITTLMETATNLSTTVHITWTLPKADLTS 299
LT T + T T T + +T+ T TTL + + STT T T+ + TS
Sbjct: 399 LTSTTTEEPSTSTTTTEVTSTSSTVTTTEPTTTLTTSTASTSTTEPSTSTVTTSPSTS 456
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 27.5 bits (58), Expect = 4.8
Identities = 18/58 (31%), Positives = 26/58 (44%)
Frame = +3
Query: 126 LTQFVTRKNVTVETATNLLTTARTSLILPKITTLMETATNLSTTVHITWTLPKADLTS 299
LT T + T T T + +T+ T TTL + + STT T T+ + TS
Sbjct: 399 LTSTTTEEPSTSTTTTEVTSTSSTVTTTEPTTTLTTSTASTSTTEPSTSTVTTSPSTS 456
>Z70753-10|CAD44125.1| 296|Caenorhabditis elegans Hypothetical
protein F40F9.1a protein.
Length = 296
Score = 27.1 bits (57), Expect = 6.4
Identities = 15/44 (34%), Positives = 18/44 (40%), Gaps = 2/44 (4%)
Frame = +2
Query: 155 YGGNGYEPIDNRPYIVN--PPKDYNPNGNGYEPIDNGAYYVDPP 280
Y Y P PY PP +N G+G GAY+ PP
Sbjct: 3 YNQQPYNPAYQNPYPNQGPPPPGFN-TGDGQNQNQGGAYFSPPP 45
>Z70753-1|CAD44126.1| 296|Caenorhabditis elegans Hypothetical
protein F40F9.1b protein.
Length = 296
Score = 27.1 bits (57), Expect = 6.4
Identities = 15/44 (34%), Positives = 18/44 (40%), Gaps = 2/44 (4%)
Frame = +2
Query: 155 YGGNGYEPIDNRPYIVN--PPKDYNPNGNGYEPIDNGAYYVDPP 280
Y Y P PY PP +N G+G GAY+ PP
Sbjct: 3 YNQQPYNPAYQNPYPNQGPPPPGFN-TGDGQNQNQGGAYFSPPP 45
>Z54236-4|CAA90984.1| 1274|Caenorhabditis elegans Hypothetical protein
C27B7.4 protein.
Length = 1274
Score = 27.1 bits (57), Expect = 6.4
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +2
Query: 233 NGYEPIDNGAYYVDPPQGRPYFKPTPFPGA 322
NGY +NG +P Q P P+ FPGA
Sbjct: 1146 NGYPNNNNGGAIGNPQQMLPPRDPSAFPGA 1175
>AF025471-4|AAB71063.1| 151|Caenorhabditis elegans Hypothetical
protein R52.6 protein.
Length = 151
Score = 27.1 bits (57), Expect = 6.4
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = +3
Query: 162 ETATNLLTTARTSLILPKITTLMETATNLSTTVHITWTL 278
E T ++TT TS + K+ M AT + WTL
Sbjct: 51 EETTEMMTTMETSTMTEKVCPEMPAATACMDLTTLGWTL 89
>Z81082-6|CAB03098.1| 279|Caenorhabditis elegans Hypothetical
protein F42G4.6 protein.
Length = 279
Score = 26.6 bits (56), Expect = 8.4
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +2
Query: 128 DSVRDAKKRYGGNG-YEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDPP 280
+SV D R N YEP+ +N PK + NG +P+DN YV+ P
Sbjct: 42 ESVDDGNSRTPYNSIYEPLS-----LNKPKPDGRSSNGKKPVDN--EYVNLP 86
>Z75542-6|CAA99864.3| 552|Caenorhabditis elegans Hypothetical
protein F55D12.5 protein.
Length = 552
Score = 26.6 bits (56), Expect = 8.4
Identities = 16/48 (33%), Positives = 20/48 (41%), Gaps = 1/48 (2%)
Frame = +3
Query: 141 TRKNVTVETATNLLTTARTS-LILPKITTLMETATNLSTTVHITWTLP 281
T T T T TT T +I P + T STT + +TLP
Sbjct: 417 TTTTTTTTTTTEAPTTTTTEPIIYPPANFKKASKTTTSTTTEMIYTLP 464
>Z75538-3|CAA99842.3| 552|Caenorhabditis elegans Hypothetical
protein F55D12.5 protein.
Length = 552
Score = 26.6 bits (56), Expect = 8.4
Identities = 16/48 (33%), Positives = 20/48 (41%), Gaps = 1/48 (2%)
Frame = +3
Query: 141 TRKNVTVETATNLLTTARTS-LILPKITTLMETATNLSTTVHITWTLP 281
T T T T TT T +I P + T STT + +TLP
Sbjct: 417 TTTTTTTTTTTEAPTTTTTEPIIYPPANFKKASKTTTSTTTEMIYTLP 464
>AL034543-5|CAA22519.1| 279|Caenorhabditis elegans Hypothetical
protein F42G4.6 protein.
Length = 279
Score = 26.6 bits (56), Expect = 8.4
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +2
Query: 128 DSVRDAKKRYGGNG-YEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDPP 280
+SV D R N YEP+ +N PK + NG +P+DN YV+ P
Sbjct: 42 ESVDDGNSRTPYNSIYEPLS-----LNKPKPDGRSSNGKKPVDN--EYVNLP 86
>AL034543-1|CAA22516.1| 243|Caenorhabditis elegans Hypothetical
protein Y81G3A.1 protein.
Length = 243
Score = 26.6 bits (56), Expect = 8.4
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +2
Query: 128 DSVRDAKKRYGGNG-YEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDPP 280
+SV D R N YEP+ +N PK + NG +P+DN YV+ P
Sbjct: 42 ESVDDGNSRTPYNSIYEPLS-----LNKPKPDGRSSNGKKPVDN--EYVNLP 86
>AF002198-10|AAF99937.1| 471|Caenorhabditis elegans Hypothetical
protein F35F10.12 protein.
Length = 471
Score = 26.6 bits (56), Expect = 8.4
Identities = 21/58 (36%), Positives = 22/58 (37%), Gaps = 2/58 (3%)
Frame = +2
Query: 161 GNGYEPIDNRPYIVNPPKDYN--PNGNGYEPIDNGAYYVDPPQGRPYFKPTPFPGARG 328
G G P P V PP Y P +G DNGA P G PY P P G
Sbjct: 357 GGGVAPAGVAPAGVVPPPGYGFLPMTDG---TDNGAGDTPYPVGPPYPSDVPAPYPSG 411
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,045,543
Number of Sequences: 27780
Number of extensions: 230110
Number of successful extensions: 702
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 672
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 700
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 799252350
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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