Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt4k06
(682 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL109839-1|CAI95631.1| 614|Homo sapiens chromosome 20 open read... 36 0.18
AL008725-4|CAI95662.1| 614|Homo sapiens chromosome 20 open read... 36 0.18
D85181-1|BAA18970.1| 236|Homo sapiens fungal sterol-C5-desatura... 31 2.9
BC050427-1|AAH50427.1| 299|Homo sapiens sterol-C5-desaturase (E... 31 2.9
BC012333-1|AAH12333.1| 299|Homo sapiens sterol-C5-desaturase (E... 31 2.9
AK223141-1|BAD96861.1| 299|Homo sapiens sterol-C5-desaturase (E... 31 2.9
AK222686-1|BAD96406.1| 299|Homo sapiens sterol-C5-desaturase (E... 31 2.9
AF187981-1|AAF00544.1| 299|Homo sapiens delta7-sterol-C5-desatu... 31 2.9
AB057650-1|BAB68218.1| 299|Homo sapiens sterol C5 desaturase pr... 31 2.9
AB016247-1|BAA33729.1| 299|Homo sapiens sterol-C5-desaturase pr... 31 2.9
BC025311-1|AAH25311.1| 700|Homo sapiens hedgehog interacting pr... 31 5.0
AY358747-1|AAQ89107.1| 700|Homo sapiens HIP protein. 31 5.0
AY009951-1|AAG34731.1| 700|Homo sapiens hedgehog-interacting pr... 31 5.0
AY009317-1|AAG35411.1| 700|Homo sapiens hedgehog-interacting pr... 31 5.0
AK024645-1|BAB14945.1| 130|Homo sapiens protein ( Homo sapiens ... 31 5.0
AF326471-1|AAK18182.1| 700|Homo sapiens hedgehog-interacting pr... 31 5.0
X63556-1|CAA45118.1| 3002|Homo sapiens fibrillin protein. 30 6.6
L13923-1|AAB02036.1| 2871|Homo sapiens fibrillin protein. 30 6.6
AB177803-1|BAD16739.1| 2871|Homo sapiens fibrillin 1 protein. 30 6.6
AB177802-1|BAD16738.1| 1365|Homo sapiens fibrillin 1 protein. 30 6.6
AB177801-1|BAD16737.1| 195|Homo sapiens fibrillin 1 protein. 30 6.6
>AL109839-1|CAI95631.1| 614|Homo sapiens chromosome 20 open reading
frame 119 protein.
Length = 614
Score = 35.5 bits (78), Expect = 0.18
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = -1
Query: 91 SPTSPQPSWLSQPPTPR*PSLCRQPV 14
+PT P P W SQPP P S+ R PV
Sbjct: 427 TPTQPAPRWTSQPPRPSCASMVRPPV 452
>AL008725-4|CAI95662.1| 614|Homo sapiens chromosome 20 open reading
frame 119 protein.
Length = 614
Score = 35.5 bits (78), Expect = 0.18
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = -1
Query: 91 SPTSPQPSWLSQPPTPR*PSLCRQPV 14
+PT P P W SQPP P S+ R PV
Sbjct: 427 TPTQPAPRWTSQPPRPSCASMVRPPV 452
>D85181-1|BAA18970.1| 236|Homo sapiens fungal sterol-C5-desaturase
homolog protein.
Length = 236
Score = 31.5 bits (68), Expect = 2.9
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 4/50 (8%)
Frame = -2
Query: 267 VHETLHDF--GF*ETILVVFKLETFADLFDFLVHNWLHHPI--EQLHNEH 130
+H+ L +F G E ++ + F D+F + +H LHH + ++LH H
Sbjct: 105 LHDDLGEFPYGLFELVVSIISFLFFTDMFIYWIHRGLHHRLVYKRLHKPH 154
>BC050427-1|AAH50427.1| 299|Homo sapiens sterol-C5-desaturase (ERG3
delta-5-desaturase homolog, S. cerevisiae)-like protein.
Length = 299
Score = 31.5 bits (68), Expect = 2.9
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 4/50 (8%)
Frame = -2
Query: 267 VHETLHDF--GF*ETILVVFKLETFADLFDFLVHNWLHHPI--EQLHNEH 130
+H+ L +F G E ++ + F D+F + +H LHH + ++LH H
Sbjct: 105 LHDDLGEFPYGLFELVVSIISFLFFTDMFIYWIHRGLHHRLVYKRLHKPH 154
>BC012333-1|AAH12333.1| 299|Homo sapiens sterol-C5-desaturase (ERG3
delta-5-desaturase homolog, S. cerevisiae)-like protein.
Length = 299
Score = 31.5 bits (68), Expect = 2.9
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 4/50 (8%)
Frame = -2
Query: 267 VHETLHDF--GF*ETILVVFKLETFADLFDFLVHNWLHHPI--EQLHNEH 130
+H+ L +F G E ++ + F D+F + +H LHH + ++LH H
Sbjct: 105 LHDDLGEFPYGLFELVVSIISFLFFTDMFIYWIHRGLHHRLVYKRLHKPH 154
>AK223141-1|BAD96861.1| 299|Homo sapiens sterol-C5-desaturase (ERG3
delta-5-desaturase homolog, fungal)-like variant
protein.
Length = 299
Score = 31.5 bits (68), Expect = 2.9
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 4/50 (8%)
Frame = -2
Query: 267 VHETLHDF--GF*ETILVVFKLETFADLFDFLVHNWLHHPI--EQLHNEH 130
+H+ L +F G E ++ + F D+F + +H LHH + ++LH H
Sbjct: 105 LHDDLGEFPYGLFELVVSIISFLFFTDMFIYWIHRGLHHRLVYKRLHKPH 154
>AK222686-1|BAD96406.1| 299|Homo sapiens sterol-C5-desaturase (ERG3
delta-5-desaturase homolog, fungal)-like variant
protein.
Length = 299
Score = 31.5 bits (68), Expect = 2.9
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 4/50 (8%)
Frame = -2
Query: 267 VHETLHDF--GF*ETILVVFKLETFADLFDFLVHNWLHHPI--EQLHNEH 130
+H+ L +F G E ++ + F D+F + +H LHH + ++LH H
Sbjct: 105 LHDDLGEFPYGLFELVVSIISFLFFTDMFIYWIHRGLHHRLVYKRLHKPH 154
>AF187981-1|AAF00544.1| 299|Homo sapiens
delta7-sterol-C5-desaturase protein.
Length = 299
Score = 31.5 bits (68), Expect = 2.9
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 4/50 (8%)
Frame = -2
Query: 267 VHETLHDF--GF*ETILVVFKLETFADLFDFLVHNWLHHPI--EQLHNEH 130
+H+ L +F G E ++ + F D+F + +H LHH + ++LH H
Sbjct: 105 LHDDLGEFPYGLFELVVSIISFLFFTDMFIYWIHRGLHHRLVYKRLHKPH 154
>AB057650-1|BAB68218.1| 299|Homo sapiens sterol C5 desaturase
protein.
Length = 299
Score = 31.5 bits (68), Expect = 2.9
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 4/50 (8%)
Frame = -2
Query: 267 VHETLHDF--GF*ETILVVFKLETFADLFDFLVHNWLHHPI--EQLHNEH 130
+H+ L +F G E ++ + F D+F + +H LHH + ++LH H
Sbjct: 105 LHDDLGEFPYGLFELVVSIISFLFFTDMFIYWIHRGLHHRLVYKRLHKPH 154
>AB016247-1|BAA33729.1| 299|Homo sapiens sterol-C5-desaturase
protein.
Length = 299
Score = 31.5 bits (68), Expect = 2.9
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 4/50 (8%)
Frame = -2
Query: 267 VHETLHDF--GF*ETILVVFKLETFADLFDFLVHNWLHHPI--EQLHNEH 130
+H+ L +F G E ++ + F D+F + +H LHH + ++LH H
Sbjct: 105 LHDDLGEFPYGLFELVVSIISFLFFTDMFIYWIHRGLHHRLVYKRLHKPH 154
>BC025311-1|AAH25311.1| 700|Homo sapiens hedgehog interacting
protein protein.
Length = 700
Score = 30.7 bits (66), Expect = 5.0
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = +3
Query: 408 ETQCKRGDVCVRPHRCLQTPRRL--QRNRITRSLRNLS 515
E C+ G VCVRP++CL L Q ++ R++R ++
Sbjct: 640 EPACRHGGVCVRPNKCLCKKGYLGPQCEQVDRNIRRVT 677
>AY358747-1|AAQ89107.1| 700|Homo sapiens HIP protein.
Length = 700
Score = 30.7 bits (66), Expect = 5.0
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = +3
Query: 408 ETQCKRGDVCVRPHRCLQTPRRL--QRNRITRSLRNLS 515
E C+ G VCVRP++CL L Q ++ R++R ++
Sbjct: 640 EPACRHGGVCVRPNKCLCKKGYLGPQCEQVDRNIRRVT 677
>AY009951-1|AAG34731.1| 700|Homo sapiens hedgehog-interacting
protein protein.
Length = 700
Score = 30.7 bits (66), Expect = 5.0
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = +3
Query: 408 ETQCKRGDVCVRPHRCLQTPRRL--QRNRITRSLRNLS 515
E C+ G VCVRP++CL L Q ++ R++R ++
Sbjct: 640 EPACRHGGVCVRPNKCLCKKGYLGPQCEQVDRNIRRVT 677
>AY009317-1|AAG35411.1| 700|Homo sapiens hedgehog-interacting
protein protein.
Length = 700
Score = 30.7 bits (66), Expect = 5.0
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = +3
Query: 408 ETQCKRGDVCVRPHRCLQTPRRL--QRNRITRSLRNLS 515
E C+ G VCVRP++CL L Q ++ R++R ++
Sbjct: 640 EPACRHGGVCVRPNKCLCKKGYLGPQCEQVDRNIRRVT 677
>AK024645-1|BAB14945.1| 130|Homo sapiens protein ( Homo sapiens
cDNA: FLJ20992 fis, clone CAE02114. ).
Length = 130
Score = 30.7 bits (66), Expect = 5.0
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = +3
Query: 408 ETQCKRGDVCVRPHRCLQTPRRL--QRNRITRSLRNLS 515
E C+ G VCVRP++CL L Q ++ R++R ++
Sbjct: 70 EPACRHGGVCVRPNKCLCKKGYLGPQCEQVDRNIRRVT 107
>AF326471-1|AAK18182.1| 700|Homo sapiens hedgehog-interacting
protein protein.
Length = 700
Score = 30.7 bits (66), Expect = 5.0
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = +3
Query: 408 ETQCKRGDVCVRPHRCLQTPRRL--QRNRITRSLRNLS 515
E C+ G VCVRP++CL L Q ++ R++R ++
Sbjct: 640 EPACRHGGVCVRPNKCLCKKGYLGPQCEQVDRNIRRVT 677
>X63556-1|CAA45118.1| 3002|Homo sapiens fibrillin protein.
Length = 3002
Score = 30.3 bits (65), Expect = 6.6
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +3
Query: 354 HALLRKGLCHIH*DRLLDETQCKRGDVCVRPHRCLQT 464
H L +KG H + + E+ C G CV P+RC T
Sbjct: 264 HCLCQKGYIGTHCGQPVCESGCLNGGRCVAPNRCACT 300
>L13923-1|AAB02036.1| 2871|Homo sapiens fibrillin protein.
Length = 2871
Score = 30.3 bits (65), Expect = 6.6
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +3
Query: 354 HALLRKGLCHIH*DRLLDETQCKRGDVCVRPHRCLQT 464
H L +KG H + + E+ C G CV P+RC T
Sbjct: 133 HCLCQKGYIGTHCGQPVCESGCLNGGRCVAPNRCACT 169
>AB177803-1|BAD16739.1| 2871|Homo sapiens fibrillin 1 protein.
Length = 2871
Score = 30.3 bits (65), Expect = 6.6
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +3
Query: 354 HALLRKGLCHIH*DRLLDETQCKRGDVCVRPHRCLQT 464
H L +KG H + + E+ C G CV P+RC T
Sbjct: 133 HCLCQKGYIGTHCGQPVCESGCLNGGRCVAPNRCACT 169
>AB177802-1|BAD16738.1| 1365|Homo sapiens fibrillin 1 protein.
Length = 1365
Score = 30.3 bits (65), Expect = 6.6
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +3
Query: 354 HALLRKGLCHIH*DRLLDETQCKRGDVCVRPHRCLQT 464
H L +KG H + + E+ C G CV P+RC T
Sbjct: 133 HCLCQKGYIGTHCGQPVCESGCLNGGRCVAPNRCACT 169
>AB177801-1|BAD16737.1| 195|Homo sapiens fibrillin 1 protein.
Length = 195
Score = 30.3 bits (65), Expect = 6.6
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +3
Query: 354 HALLRKGLCHIH*DRLLDETQCKRGDVCVRPHRCLQT 464
H L +KG H + + E+ C G CV P+RC T
Sbjct: 133 HCLCQKGYIGTHCGQPVCESGCLNGGRCVAPNRCACT 169
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,050,281
Number of Sequences: 237096
Number of extensions: 2056405
Number of successful extensions: 5262
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 4939
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5262
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7727256732
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -