Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt4k03
         (780 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY060312-1|AAL25351.1|  239|Drosophila melanogaster GH17623p pro...    63   5e-10
AE013599-272|AAS64795.1|  239|Drosophila melanogaster CG30159-PB...    63   5e-10
AE013599-271|AAM70842.1|  239|Drosophila melanogaster CG30159-PA...    63   5e-10
BT003459-1|AAO39462.1|  925|Drosophila melanogaster RH30917p pro...    30   3.1  
AE014298-780|AAF46066.2|  725|Drosophila melanogaster CG33080-PB...    30   3.1  
AE014298-779|AAF46068.2|  925|Drosophila melanogaster CG33080-PA...    30   3.1  
BT004479-1|AAO42643.1| 1354|Drosophila melanogaster LD41624p pro...    29   9.5  
AY113369-1|AAM29374.1|  910|Drosophila melanogaster LD32717p pro...    29   9.5  
AE014134-2028|AAF53066.2| 1354|Drosophila melanogaster CG6181-PB...    29   9.5  
AE014134-2027|AAF53067.2| 1354|Drosophila melanogaster CG6181-PA...    29   9.5  

>AY060312-1|AAL25351.1|  239|Drosophila melanogaster GH17623p
           protein.
          Length = 239

 Score = 62.9 bits (146), Expect = 5e-10
 Identities = 45/153 (29%), Positives = 79/153 (51%), Gaps = 6/153 (3%)
 Frame = +3

Query: 21  QIAVYALATAGLAISVHKIRP---VSKFSKASKVPDHFIRNHEPLKGLYAGV--QHSPVR 185
           ++A+Y  +   LA++  K +P   V +F + S +P+  I       G  AGV  Q     
Sbjct: 27  ELAIYGTSAIMLAVAYAKRKPAYLVRQFKQPSHIPERLINERVMHTGKIAGVKQQEQDTL 86

Query: 186 VLVNHKAPIYLPLWHSSKPPLPVKLWGIEVVSGNAVNWLECVARGQQVTLKPI-GRDNDD 362
           +++ H+ P++ P++ SSK  LPVKL G+  V+ N  +WL+    G++ T  P+      D
Sbjct: 87  LMIQHR-PLF-PIFTSSKRLLPVKLPGVR-VNANGYSWLQQCLIGREATFLPLKSAKGQD 143

Query: 363 LVSTVLLHLPQPKSKDVQTLDIGKKLVELGFAK 461
            V   L  +  P+    + LD+ + L++L FA+
Sbjct: 144 FVVCQLCLVHPPRGN--RLLDVSETLLKLRFAR 174


>AE013599-272|AAS64795.1|  239|Drosophila melanogaster CG30159-PB,
           isoform B protein.
          Length = 239

 Score = 62.9 bits (146), Expect = 5e-10
 Identities = 45/153 (29%), Positives = 79/153 (51%), Gaps = 6/153 (3%)
 Frame = +3

Query: 21  QIAVYALATAGLAISVHKIRP---VSKFSKASKVPDHFIRNHEPLKGLYAGV--QHSPVR 185
           ++A+Y  +   LA++  K +P   V +F + S +P+  I       G  AGV  Q     
Sbjct: 27  ELAIYGTSAIMLAVAYAKRKPAYLVRQFKQPSHIPERLINERVMHTGKIAGVKQQEQDTL 86

Query: 186 VLVNHKAPIYLPLWHSSKPPLPVKLWGIEVVSGNAVNWLECVARGQQVTLKPI-GRDNDD 362
           +++ H+ P++ P++ SSK  LPVKL G+  V+ N  +WL+    G++ T  P+      D
Sbjct: 87  LMIQHR-PLF-PIFTSSKRLLPVKLPGVR-VNANGYSWLQQCLIGREATFLPLKSAKGQD 143

Query: 363 LVSTVLLHLPQPKSKDVQTLDIGKKLVELGFAK 461
            V   L  +  P+    + LD+ + L++L FA+
Sbjct: 144 FVVCQLCLVHPPRGN--RLLDVSETLLKLRFAR 174


>AE013599-271|AAM70842.1|  239|Drosophila melanogaster CG30159-PA,
           isoform A protein.
          Length = 239

 Score = 62.9 bits (146), Expect = 5e-10
 Identities = 45/153 (29%), Positives = 79/153 (51%), Gaps = 6/153 (3%)
 Frame = +3

Query: 21  QIAVYALATAGLAISVHKIRP---VSKFSKASKVPDHFIRNHEPLKGLYAGV--QHSPVR 185
           ++A+Y  +   LA++  K +P   V +F + S +P+  I       G  AGV  Q     
Sbjct: 27  ELAIYGTSAIMLAVAYAKRKPAYLVRQFKQPSHIPERLINERVMHTGKIAGVKQQEQDTL 86

Query: 186 VLVNHKAPIYLPLWHSSKPPLPVKLWGIEVVSGNAVNWLECVARGQQVTLKPI-GRDNDD 362
           +++ H+ P++ P++ SSK  LPVKL G+  V+ N  +WL+    G++ T  P+      D
Sbjct: 87  LMIQHR-PLF-PIFTSSKRLLPVKLPGVR-VNANGYSWLQQCLIGREATFLPLKSAKGQD 143

Query: 363 LVSTVLLHLPQPKSKDVQTLDIGKKLVELGFAK 461
            V   L  +  P+    + LD+ + L++L FA+
Sbjct: 144 FVVCQLCLVHPPRGN--RLLDVSETLLKLRFAR 174


>BT003459-1|AAO39462.1|  925|Drosophila melanogaster RH30917p
           protein.
          Length = 925

 Score = 30.3 bits (65), Expect = 3.1
 Identities = 14/30 (46%), Positives = 19/30 (63%)
 Frame = +1

Query: 43  PPLVSPYLFIRFALLASFRKPVKFQIISSE 132
           PPL  P LFIR+  LA+F   ++F  + SE
Sbjct: 771 PPLPDPELFIRWLQLATFMPAMQFSHLPSE 800


>AE014298-780|AAF46066.2|  725|Drosophila melanogaster CG33080-PB,
           isoform B protein.
          Length = 725

 Score = 30.3 bits (65), Expect = 3.1
 Identities = 14/30 (46%), Positives = 19/30 (63%)
 Frame = +1

Query: 43  PPLVSPYLFIRFALLASFRKPVKFQIISSE 132
           PPL  P LFIR+  LA+F   ++F  + SE
Sbjct: 571 PPLPDPELFIRWLQLATFMPAMQFSHLPSE 600


>AE014298-779|AAF46068.2|  925|Drosophila melanogaster CG33080-PA,
           isoform A protein.
          Length = 925

 Score = 30.3 bits (65), Expect = 3.1
 Identities = 14/30 (46%), Positives = 19/30 (63%)
 Frame = +1

Query: 43  PPLVSPYLFIRFALLASFRKPVKFQIISSE 132
           PPL  P LFIR+  LA+F   ++F  + SE
Sbjct: 771 PPLPDPELFIRWLQLATFMPAMQFSHLPSE 800


>BT004479-1|AAO42643.1| 1354|Drosophila melanogaster LD41624p protein.
          Length = 1354

 Score = 28.7 bits (61), Expect = 9.5
 Identities = 19/61 (31%), Positives = 31/61 (50%)
 Frame = +3

Query: 369  STVLLHLPQPKSKDVQTLDIGKKLVELGFAKASFPKELKKNTIESQIAPALLSAEAQAKS 548
            +T L H+PQP++    T +I  KL  L   K      L K+   +++  A+L  + + KS
Sbjct: 1123 NTYLQHMPQPQAGSGNTEEINNKLSML---KQLVESSLHKH--RTELTDAMLETQREVKS 1177

Query: 549  L 551
            L
Sbjct: 1178 L 1178


>AY113369-1|AAM29374.1|  910|Drosophila melanogaster LD32717p
           protein.
          Length = 910

 Score = 28.7 bits (61), Expect = 9.5
 Identities = 19/61 (31%), Positives = 31/61 (50%)
 Frame = +3

Query: 369 STVLLHLPQPKSKDVQTLDIGKKLVELGFAKASFPKELKKNTIESQIAPALLSAEAQAKS 548
           +T L H+PQP++    T +I  KL  L   K      L K+   +++  A+L  + + KS
Sbjct: 679 NTYLQHMPQPQAGSGNTEEINNKLSML---KQLVESSLHKH--RTELTDAMLETQREVKS 733

Query: 549 L 551
           L
Sbjct: 734 L 734


>AE014134-2028|AAF53066.2| 1354|Drosophila melanogaster CG6181-PB,
            isoform B protein.
          Length = 1354

 Score = 28.7 bits (61), Expect = 9.5
 Identities = 19/61 (31%), Positives = 31/61 (50%)
 Frame = +3

Query: 369  STVLLHLPQPKSKDVQTLDIGKKLVELGFAKASFPKELKKNTIESQIAPALLSAEAQAKS 548
            +T L H+PQP++    T +I  KL  L   K      L K+   +++  A+L  + + KS
Sbjct: 1123 NTYLQHMPQPQAGSGNTEEINNKLSML---KQLVESSLHKH--RTELTDAMLETQREVKS 1177

Query: 549  L 551
            L
Sbjct: 1178 L 1178


>AE014134-2027|AAF53067.2| 1354|Drosophila melanogaster CG6181-PA,
            isoform A protein.
          Length = 1354

 Score = 28.7 bits (61), Expect = 9.5
 Identities = 19/61 (31%), Positives = 31/61 (50%)
 Frame = +3

Query: 369  STVLLHLPQPKSKDVQTLDIGKKLVELGFAKASFPKELKKNTIESQIAPALLSAEAQAKS 548
            +T L H+PQP++    T +I  KL  L   K      L K+   +++  A+L  + + KS
Sbjct: 1123 NTYLQHMPQPQAGSGNTEEINNKLSML---KQLVESSLHKH--RTELTDAMLETQREVKS 1177

Query: 549  L 551
            L
Sbjct: 1178 L 1178


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,001,665
Number of Sequences: 53049
Number of extensions: 754115
Number of successful extensions: 1845
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1797
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1845
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3623012976
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)