Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt4k01
(677 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF163151-1|AAF42472.1| 1253|Homo sapiens dentin sialophosphoprot... 33 0.93
AF094508-1|AAD16120.1| 788|Homo sapiens dentin phosphoryn protein. 33 0.93
L38969-1|AAC41762.1| 956|Homo sapiens thrombospondin 3 protein. 30 6.6
BC113847-1|AAI13848.1| 956|Homo sapiens thrombospondin 3, precu... 30 6.6
BC113846-1|AAI13847.1| 485|Homo sapiens THBS3 protein protein. 30 6.6
BC018786-1|AAH18786.1| 592|Homo sapiens Similar to thrombospond... 30 6.6
BC013889-1|AAH13889.1| 759|Homo sapiens RNA binding motif prote... 30 6.6
AL713999-15|CAI95084.1| 956|Homo sapiens thrombospondin 3 protein. 30 6.6
AK223278-1|BAD96998.1| 956|Homo sapiens thrombospondin 3 precur... 30 6.6
AK222716-1|BAD96436.1| 759|Homo sapiens RNA binding motif prote... 30 6.6
AK001239-1|BAA91575.1| 759|Homo sapiens protein ( Homo sapiens ... 30 6.6
AF023268-6|AAC51818.1| 736|Homo sapiens thrombospondin3 protein. 30 6.6
BC032446-1|AAH32446.1| 767|Homo sapiens cold shock domain conta... 30 8.7
AY049788-1|AAL15445.1| 708|Homo sapiens NRAS-related protein pr... 30 8.7
AL096773-4|CAI18826.1| 767|Homo sapiens cold shock domain conta... 30 8.7
AK022528-1|BAB14080.1| 767|Homo sapiens protein ( Homo sapiens ... 30 8.7
AK022516-1|BAB14073.1| 767|Homo sapiens protein ( Homo sapiens ... 30 8.7
AF070542-1|AAC28634.1| 467|Homo sapiens unknown protein. 30 8.7
>AF163151-1|AAF42472.1| 1253|Homo sapiens dentin sialophosphoprotein
precursor protein.
Length = 1253
Score = 33.1 bits (72), Expect = 0.93
Identities = 27/110 (24%), Positives = 50/110 (45%), Gaps = 8/110 (7%)
Frame = +1
Query: 157 ADHSDSDSGESWTLLENSSACGEDAPVILKNFNSERQAVDSNTDKDEDTDGISIISDCEQ 336
+D SDSDS +S ++S + D+ + +S+ DS+ D D+ S SD
Sbjct: 547 SDSSDSDSSDSSNSSDSSDSSDSDSSDSNSSSDSDSSDSDSSDSSDSDSSDSSNSSDSSD 606
Query: 337 --------DTAFEPNNDQQQFLSESELKDFTNQYISITPISTNSSDHDEA 462
D++ ++ SES+ D ++ S S++SSD+ ++
Sbjct: 607 SSDSSDSSDSSDSSDSKSDSSKSESDSSDSDSKSDSSDSNSSDSSDNSDS 656
Score = 30.3 bits (65), Expect = 6.6
Identities = 25/113 (22%), Positives = 48/113 (42%), Gaps = 1/113 (0%)
Frame = +1
Query: 160 DHSDSDSGESWTLLENSSACGEDAPVILKNFNSERQAVDSNTDKDEDTDGISIISDCEQD 339
D SDS G+S + +SS + + +S+ + DSN+ D D+ + D
Sbjct: 538 DKSDSGKGKSDSSDSDSSDSSNSSD---SSDSSDSDSSDSNSSSDSDSSDSDSSDSSDSD 594
Query: 340 TAFEPN-NDQQQFLSESELKDFTNQYISITPISTNSSDHDEAKHEYDFLGDNN 495
++ N +D S+ D ++ S + S + SD ++ + D N+
Sbjct: 595 SSDSSNSSDSSDSSDSSDSSDSSDSSDSKSDSSKSESDSSDSDSKSDSSDSNS 647
>AF094508-1|AAD16120.1| 788|Homo sapiens dentin phosphoryn protein.
Length = 788
Score = 33.1 bits (72), Expect = 0.93
Identities = 27/110 (24%), Positives = 50/110 (45%), Gaps = 8/110 (7%)
Frame = +1
Query: 157 ADHSDSDSGESWTLLENSSACGEDAPVILKNFNSERQAVDSNTDKDEDTDGISIISDCEQ 336
+D SDSDS +S ++S + D+ + +S+ DS+ D D+ S SD
Sbjct: 85 SDSSDSDSSDSSNSSDSSDSSDSDSSDSNSSSDSDSSDSDSSDSSDSDSSDSSNSSDSSD 144
Query: 337 --------DTAFEPNNDQQQFLSESELKDFTNQYISITPISTNSSDHDEA 462
D++ ++ SES+ D ++ S S++SSD+ ++
Sbjct: 145 SSDSSDSSDSSDSSDSKSDSSKSESDSSDSDSKSDSSDSNSSDSSDNSDS 194
Score = 30.3 bits (65), Expect = 6.6
Identities = 25/113 (22%), Positives = 48/113 (42%), Gaps = 1/113 (0%)
Frame = +1
Query: 160 DHSDSDSGESWTLLENSSACGEDAPVILKNFNSERQAVDSNTDKDEDTDGISIISDCEQD 339
D SDS G+S + +SS + + +S+ + DSN+ D D+ + D
Sbjct: 76 DKSDSGKGKSDSSDSDSSDSSNSSD---SSDSSDSDSSDSNSSSDSDSSDSDSSDSSDSD 132
Query: 340 TAFEPN-NDQQQFLSESELKDFTNQYISITPISTNSSDHDEAKHEYDFLGDNN 495
++ N +D S+ D ++ S + S + SD ++ + D N+
Sbjct: 133 SSDSSNSSDSSDSSDSSDSSDSSDSSDSKSDSSKSESDSSDSDSKSDSSDSNS 185
>L38969-1|AAC41762.1| 956|Homo sapiens thrombospondin 3 protein.
Length = 956
Score = 30.3 bits (65), Expect = 6.6
Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +1
Query: 199 LENSSACGEDAPVILKNFNSERQAVDSNTDK-DEDTDGISIISDCEQDTAFEPNNDQQQF 375
++N+ C +D ++ N E D D+ D+D DG I + E + PN DQQ
Sbjct: 472 MDNNKHCKQDNCLLTPNSGQEDADNDGVGDQCDDDADGDGI-KNVEDNCRLFPNKDQQNS 530
Query: 376 LSES 387
++S
Sbjct: 531 DTDS 534
>BC113847-1|AAI13848.1| 956|Homo sapiens thrombospondin 3,
precursor protein.
Length = 956
Score = 30.3 bits (65), Expect = 6.6
Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +1
Query: 199 LENSSACGEDAPVILKNFNSERQAVDSNTDK-DEDTDGISIISDCEQDTAFEPNNDQQQF 375
++N+ C +D ++ N E D D+ D+D DG I + E + PN DQQ
Sbjct: 472 MDNNKHCKQDNCLLTPNSGQEDADNDGVGDQCDDDADGDGI-KNVEDNCRLFPNKDQQNS 530
Query: 376 LSES 387
++S
Sbjct: 531 DTDS 534
>BC113846-1|AAI13847.1| 485|Homo sapiens THBS3 protein protein.
Length = 485
Score = 30.3 bits (65), Expect = 6.6
Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +1
Query: 199 LENSSACGEDAPVILKNFNSERQAVDSNTDK-DEDTDGISIISDCEQDTAFEPNNDQQQF 375
++N+ C +D ++ N E D D+ D+D DG I + E + PN DQQ
Sbjct: 1 MDNNKHCKQDNCLLTPNSGQEDADNDGVGDQCDDDADGDGI-KNVEDNCRLFPNKDQQNS 59
Query: 376 LSES 387
++S
Sbjct: 60 DTDS 63
>BC018786-1|AAH18786.1| 592|Homo sapiens Similar to thrombospondin
3 protein.
Length = 592
Score = 30.3 bits (65), Expect = 6.6
Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +1
Query: 199 LENSSACGEDAPVILKNFNSERQAVDSNTDK-DEDTDGISIISDCEQDTAFEPNNDQQQF 375
++N+ C +D ++ N E D D+ D+D DG I + E + PN DQQ
Sbjct: 108 MDNNKHCKQDNCLLTPNSGQEDADNDGVGDQCDDDADGDGI-KNVEDNCRLFPNKDQQNS 166
Query: 376 LSES 387
++S
Sbjct: 167 DTDS 170
>BC013889-1|AAH13889.1| 759|Homo sapiens RNA binding motif protein
28 protein.
Length = 759
Score = 30.3 bits (65), Expect = 6.6
Identities = 20/87 (22%), Positives = 39/87 (44%), Gaps = 1/87 (1%)
Frame = +1
Query: 202 ENSSACGEDAPVILKNFNSERQAVDSNTDKDEDTDGISIISDCEQDTAFEPNNDQQQFLS 381
++ SA GE+ K+ S ++ D +E+ + D E+D F+ +++++ +
Sbjct: 199 QSVSAIGEEKSHESKHQESVKKKGREEEDMEEEENDDDDDDDDEEDGVFDDEDEEEENIE 258
Query: 382 ESELKDFTNQYISI-TPISTNSSDHDE 459
K Q ++ P SSDH E
Sbjct: 259 SKVTKPVQIQKRAVKRPAPAKSSDHSE 285
>AL713999-15|CAI95084.1| 956|Homo sapiens thrombospondin 3 protein.
Length = 956
Score = 30.3 bits (65), Expect = 6.6
Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +1
Query: 199 LENSSACGEDAPVILKNFNSERQAVDSNTDK-DEDTDGISIISDCEQDTAFEPNNDQQQF 375
++N+ C +D ++ N E D D+ D+D DG I + E + PN DQQ
Sbjct: 472 MDNNKHCKQDNCLLTPNSGQEDADNDGVGDQCDDDADGDGI-KNVEDNCRLFPNKDQQNS 530
Query: 376 LSES 387
++S
Sbjct: 531 DTDS 534
>AK223278-1|BAD96998.1| 956|Homo sapiens thrombospondin 3 precursor
variant protein.
Length = 956
Score = 30.3 bits (65), Expect = 6.6
Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +1
Query: 199 LENSSACGEDAPVILKNFNSERQAVDSNTDK-DEDTDGISIISDCEQDTAFEPNNDQQQF 375
++N+ C +D ++ N E D D+ D+D DG I + E + PN DQQ
Sbjct: 472 MDNNKHCKQDNCLLTPNSGQEDADNDGVGDQCDDDADGDGI-KNVEDNCRLFPNKDQQNS 530
Query: 376 LSES 387
++S
Sbjct: 531 DTDS 534
>AK222716-1|BAD96436.1| 759|Homo sapiens RNA binding motif protein
28 variant protein.
Length = 759
Score = 30.3 bits (65), Expect = 6.6
Identities = 20/87 (22%), Positives = 39/87 (44%), Gaps = 1/87 (1%)
Frame = +1
Query: 202 ENSSACGEDAPVILKNFNSERQAVDSNTDKDEDTDGISIISDCEQDTAFEPNNDQQQFLS 381
++ SA GE+ K+ S ++ D +E+ + D E+D F+ +++++ +
Sbjct: 199 QSVSAIGEEKSHESKHQESVKKKGREEEDMEEEENDDDDDDDDEEDGVFDDEDEEEENIE 258
Query: 382 ESELKDFTNQYISI-TPISTNSSDHDE 459
K Q ++ P SSDH E
Sbjct: 259 SKVTKPVQIQKRAVKRPAPAKSSDHSE 285
>AK001239-1|BAA91575.1| 759|Homo sapiens protein ( Homo sapiens
cDNA FLJ10377 fis, clone NT2RM2001989, weakly similar to
NUCLEOLAR PROTEIN NOP4. ).
Length = 759
Score = 30.3 bits (65), Expect = 6.6
Identities = 20/87 (22%), Positives = 39/87 (44%), Gaps = 1/87 (1%)
Frame = +1
Query: 202 ENSSACGEDAPVILKNFNSERQAVDSNTDKDEDTDGISIISDCEQDTAFEPNNDQQQFLS 381
++ SA GE+ K+ S ++ D +E+ + D E+D F+ +++++ +
Sbjct: 199 QSVSAIGEEKSHESKHQESVKKKGREEEDMEEEENDDDDDDDDEEDGVFDDEDEEEENIE 258
Query: 382 ESELKDFTNQYISI-TPISTNSSDHDE 459
K Q ++ P SSDH E
Sbjct: 259 SKVTKPVQIQKRAVKRPAPAKSSDHSE 285
>AF023268-6|AAC51818.1| 736|Homo sapiens thrombospondin3 protein.
Length = 736
Score = 30.3 bits (65), Expect = 6.6
Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +1
Query: 199 LENSSACGEDAPVILKNFNSERQAVDSNTDK-DEDTDGISIISDCEQDTAFEPNNDQQQF 375
++N+ C +D ++ N E D D+ D+D DG I + E + PN DQQ
Sbjct: 472 MDNNKHCKQDNCLLTPNSGQEDADNDGVGDQCDDDADGDGI-KNVEDNCRLFPNKDQQNS 530
Query: 376 LSES 387
++S
Sbjct: 531 DTDS 534
>BC032446-1|AAH32446.1| 767|Homo sapiens cold shock domain
containing E1, RNA-binding protein.
Length = 767
Score = 29.9 bits (64), Expect = 8.7
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +1
Query: 364 QQQFLSESELKDFTNQYISITPISTNSSDHDEAKHEYDFLGDNNKHKTYVHRRN 525
+Q+ L E + Y++ TP + E + +F+ DNNKH V RN
Sbjct: 91 KQEILPEERMNGQEVFYLTYTPEDVEGNVQLETGDKINFVIDNNKHTGAVSARN 144
>AY049788-1|AAL15445.1| 708|Homo sapiens NRAS-related protein
protein.
Length = 708
Score = 29.9 bits (64), Expect = 8.7
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +1
Query: 364 QQQFLSESELKDFTNQYISITPISTNSSDHDEAKHEYDFLGDNNKHKTYVHRRN 525
+Q+ L E + Y++ TP + E + +F+ DNNKH V RN
Sbjct: 91 KQEILPEERMNGQEVFYLTYTPEDVEGNVQLETGDKINFVIDNNKHTGAVSARN 144
>AL096773-4|CAI18826.1| 767|Homo sapiens cold shock domain
containing E1, RNA-binding protein.
Length = 767
Score = 29.9 bits (64), Expect = 8.7
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +1
Query: 364 QQQFLSESELKDFTNQYISITPISTNSSDHDEAKHEYDFLGDNNKHKTYVHRRN 525
+Q+ L E + Y++ TP + E + +F+ DNNKH V RN
Sbjct: 91 KQEILPEERMNGQEVFYLTYTPEDVEGNVQLETGDKINFVIDNNKHTGAVSARN 144
>AK022528-1|BAB14080.1| 767|Homo sapiens protein ( Homo sapiens
cDNA FLJ12466 fis, clone NT2RM1000826, highly similar to
UNR PROTEIN. ).
Length = 767
Score = 29.9 bits (64), Expect = 8.7
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +1
Query: 364 QQQFLSESELKDFTNQYISITPISTNSSDHDEAKHEYDFLGDNNKHKTYVHRRN 525
+Q+ L E + Y++ TP + E + +F+ DNNKH V RN
Sbjct: 91 KQEILPEERMNGQEVFYLTYTPEDVEGNVQLETGDKINFVIDNNKHTGAVSARN 144
>AK022516-1|BAB14073.1| 767|Homo sapiens protein ( Homo sapiens
cDNA FLJ12454 fis, clone NT2RM1000555, highly similar to
UNR PROTEIN. ).
Length = 767
Score = 29.9 bits (64), Expect = 8.7
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +1
Query: 364 QQQFLSESELKDFTNQYISITPISTNSSDHDEAKHEYDFLGDNNKHKTYVHRRN 525
+Q+ L E + Y++ TP + E + +F+ DNNKH V RN
Sbjct: 91 KQEILPEERMNGQEVFYLTYTPEDVEGNVQLETGDKINFVIDNNKHTGAVSARN 144
>AF070542-1|AAC28634.1| 467|Homo sapiens unknown protein.
Length = 467
Score = 29.9 bits (64), Expect = 8.7
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +1
Query: 364 QQQFLSESELKDFTNQYISITPISTNSSDHDEAKHEYDFLGDNNKHKTYVHRRN 525
+Q+ L E + Y++ TP + E + +F+ DNNKH V RN
Sbjct: 91 KQEILPEERMNGQEVFYLTYTPEDVEGNVQLETGDKINFVIDNNKHTGAVSARN 144
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,430,976
Number of Sequences: 237096
Number of extensions: 1510705
Number of successful extensions: 3939
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 3746
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3939
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7671262118
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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