Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt4j24
(727 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY515705-1|AAR99655.1| 509|Homo sapiens bestrophin 2 protein. 130 7e-30
AF440756-1|AAM76995.1| 509|Homo sapiens vitelliform macular dys... 130 7e-30
BC101823-1|AAI01824.1| 473|Homo sapiens bestrophin 4 protein. 127 5e-29
AY515707-1|AAR99657.1| 473|Homo sapiens bestrophin 4 protein. 127 5e-29
AL592166-10|CAI13005.1| 473|Homo sapiens vitelliform macular dy... 127 5e-29
AF440757-1|AAM76996.1| 473|Homo sapiens vitelliform macular dys... 127 5e-29
AY515706-1|AAR99656.1| 668|Homo sapiens bestrophin 3 protein. 123 6e-28
AK096459-1|BAC04797.1| 668|Homo sapiens protein ( Homo sapiens ... 123 6e-28
AF440758-1|AAM76997.1| 398|Homo sapiens vitelliform macular dys... 123 6e-28
AY515704-1|AAR99654.1| 585|Homo sapiens bestrophin 1 protein. 122 1e-27
AF073501-1|AAC33766.1| 585|Homo sapiens vitelliform macular dys... 122 1e-27
AF073500-1|AAC64926.1| 585|Homo sapiens vitelliform macular dys... 122 1e-27
AF057170-1|AAC64344.1| 435|Homo sapiens bestrophin protein. 122 1e-27
AF057169-1|AAC64343.1| 585|Homo sapiens bestrophin protein. 122 1e-27
AK000139-1|BAA90970.1| 466|Homo sapiens protein ( Homo sapiens ... 108 2e-23
BC041664-1|AAH41664.1| 604|Homo sapiens BEST1 protein protein. 101 3e-21
BC015220-1|AAH15220.1| 498|Homo sapiens BEST1 protein protein. 101 3e-21
AB209451-1|BAD92688.1| 376|Homo sapiens bestrophin variant prot... 81 5e-15
BC006440-1|AAH06440.1| 72|Homo sapiens BEST3 protein protein. 40 0.007
BC017418-1|AAH17418.1| 249|Homo sapiens Unknown (protein for IM... 33 1.0
BC011842-1|AAH11842.1| 203|Homo sapiens hypothetical protein FL... 33 1.0
BC005204-1|AAH05204.1| 240|Homo sapiens Unknown (protein for IM... 33 1.0
AK002046-1|BAA92053.1| 203|Homo sapiens protein ( Homo sapiens ... 33 1.0
>AY515705-1|AAR99655.1| 509|Homo sapiens bestrophin 2 protein.
Length = 509
Score = 130 bits (313), Expect = 7e-30
Identities = 63/141 (44%), Positives = 84/141 (59%)
Frame = +2
Query: 299 MTVTYTGEVATCRGFGTFLKVLYRWRGSIXXXXXXXXXXXXXXXXXXXXXXXXXXDENAK 478
MTVTYT VA R FG F ++L WRGSI E K
Sbjct: 1 MTVTYTARVANAR-FGGFSQLLLLWRGSIYKLLWRELLCFLGFYMALSAAYRFVLTEGQK 59
Query: 479 RTFEGIVNYCHFHGNVIPLSFVLGFYVTVVMNRWWNQYTTIPWPDSIAVFVSATIHGQDE 658
R FE +V YC + ++IP+SFVLGFYVT+V+NRWW+QY +P PD++ V+ T+HG+D+
Sbjct: 60 RYFEKLVIYCDQYASLIPVSFVLGFYVTLVVNRWWSQYLCMPLPDALMCVVAGTVHGRDD 119
Query: 659 RGRLMRRTIVRYVCLCLTMVL 721
RGRL RRT++RY L ++L
Sbjct: 120 RGRLYRRTLMRYAGLSAVLIL 140
>AF440756-1|AAM76995.1| 509|Homo sapiens vitelliform macular
dystrophy 2-like protein 1 protein.
Length = 509
Score = 130 bits (313), Expect = 7e-30
Identities = 63/141 (44%), Positives = 84/141 (59%)
Frame = +2
Query: 299 MTVTYTGEVATCRGFGTFLKVLYRWRGSIXXXXXXXXXXXXXXXXXXXXXXXXXXDENAK 478
MTVTYT VA R FG F ++L WRGSI E K
Sbjct: 1 MTVTYTARVANAR-FGGFSQLLLLWRGSIYKLLWRELLCFLGFYMALSAAYRFVLTEGQK 59
Query: 479 RTFEGIVNYCHFHGNVIPLSFVLGFYVTVVMNRWWNQYTTIPWPDSIAVFVSATIHGQDE 658
R FE +V YC + ++IP+SFVLGFYVT+V+NRWW+QY +P PD++ V+ T+HG+D+
Sbjct: 60 RYFEKLVIYCDQYASLIPVSFVLGFYVTLVVNRWWSQYLCMPLPDALMCVVAGTVHGRDD 119
Query: 659 RGRLMRRTIVRYVCLCLTMVL 721
RGRL RRT++RY L ++L
Sbjct: 120 RGRLYRRTLMRYAGLSAVLIL 140
>BC101823-1|AAI01824.1| 473|Homo sapiens bestrophin 4 protein.
Length = 473
Score = 127 bits (306), Expect = 5e-29
Identities = 61/141 (43%), Positives = 84/141 (59%)
Frame = +2
Query: 299 MTVTYTGEVATCRGFGTFLKVLYRWRGSIXXXXXXXXXXXXXXXXXXXXXXXXXXDENAK 478
MTV+YT +VA R FG F +L RWRGSI + +
Sbjct: 1 MTVSYTLKVAEAR-FGGFSGLLLRWRGSIYKLLYKEFLLFGALYAVLSITYRLLLTQEQR 59
Query: 479 RTFEGIVNYCHFHGNVIPLSFVLGFYVTVVMNRWWNQYTTIPWPDSIAVFVSATIHGQDE 658
+ + YC+ ++IPLSFVLGFYVT+V+NRWW+QYT+IP PD + +SA++HG D+
Sbjct: 60 YVYAQVARYCNRSADLIPLSFVLGFYVTLVVNRWWSQYTSIPLPDQLMCVISASVHGVDQ 119
Query: 659 RGRLMRRTIVRYVCLCLTMVL 721
RGRL+RRT++RY L +VL
Sbjct: 120 RGRLLRRTLIRYANLASVLVL 140
>AY515707-1|AAR99657.1| 473|Homo sapiens bestrophin 4 protein.
Length = 473
Score = 127 bits (306), Expect = 5e-29
Identities = 61/141 (43%), Positives = 84/141 (59%)
Frame = +2
Query: 299 MTVTYTGEVATCRGFGTFLKVLYRWRGSIXXXXXXXXXXXXXXXXXXXXXXXXXXDENAK 478
MTV+YT +VA R FG F +L RWRGSI + +
Sbjct: 1 MTVSYTLKVAEAR-FGGFSGLLLRWRGSIYKLLYKEFLLFGALYAVLSITYRLLLTQEQR 59
Query: 479 RTFEGIVNYCHFHGNVIPLSFVLGFYVTVVMNRWWNQYTTIPWPDSIAVFVSATIHGQDE 658
+ + YC+ ++IPLSFVLGFYVT+V+NRWW+QYT+IP PD + +SA++HG D+
Sbjct: 60 YVYAQVARYCNRSADLIPLSFVLGFYVTLVVNRWWSQYTSIPLPDQLMCVISASVHGVDQ 119
Query: 659 RGRLMRRTIVRYVCLCLTMVL 721
RGRL+RRT++RY L +VL
Sbjct: 120 RGRLLRRTLIRYANLASVLVL 140
>AL592166-10|CAI13005.1| 473|Homo sapiens vitelliform macular
dystrophy 2-like 2 protein.
Length = 473
Score = 127 bits (306), Expect = 5e-29
Identities = 61/141 (43%), Positives = 84/141 (59%)
Frame = +2
Query: 299 MTVTYTGEVATCRGFGTFLKVLYRWRGSIXXXXXXXXXXXXXXXXXXXXXXXXXXDENAK 478
MTV+YT +VA R FG F +L RWRGSI + +
Sbjct: 1 MTVSYTLKVAEAR-FGGFSGLLLRWRGSIYKLLYKEFLLFGALYAVLSITYRLLLTQEQR 59
Query: 479 RTFEGIVNYCHFHGNVIPLSFVLGFYVTVVMNRWWNQYTTIPWPDSIAVFVSATIHGQDE 658
+ + YC+ ++IPLSFVLGFYVT+V+NRWW+QYT+IP PD + +SA++HG D+
Sbjct: 60 YVYAQVARYCNRSADLIPLSFVLGFYVTLVVNRWWSQYTSIPLPDQLMCVISASVHGVDQ 119
Query: 659 RGRLMRRTIVRYVCLCLTMVL 721
RGRL+RRT++RY L +VL
Sbjct: 120 RGRLLRRTLIRYANLASVLVL 140
>AF440757-1|AAM76996.1| 473|Homo sapiens vitelliform macular
dystrophy 2-like protein 2 protein.
Length = 473
Score = 127 bits (306), Expect = 5e-29
Identities = 61/141 (43%), Positives = 84/141 (59%)
Frame = +2
Query: 299 MTVTYTGEVATCRGFGTFLKVLYRWRGSIXXXXXXXXXXXXXXXXXXXXXXXXXXDENAK 478
MTV+YT +VA R FG F +L RWRGSI + +
Sbjct: 1 MTVSYTLKVAEAR-FGGFSGLLLRWRGSIYKLLYKEFLLFGALYAVLSITYRLLLTQEQR 59
Query: 479 RTFEGIVNYCHFHGNVIPLSFVLGFYVTVVMNRWWNQYTTIPWPDSIAVFVSATIHGQDE 658
+ + YC+ ++IPLSFVLGFYVT+V+NRWW+QYT+IP PD + +SA++HG D+
Sbjct: 60 YVYAQVARYCNRSADLIPLSFVLGFYVTLVVNRWWSQYTSIPLPDQLMCVISASVHGVDQ 119
Query: 659 RGRLMRRTIVRYVCLCLTMVL 721
RGRL+RRT++RY L +VL
Sbjct: 120 RGRLLRRTLIRYANLASVLVL 140
>AY515706-1|AAR99656.1| 668|Homo sapiens bestrophin 3 protein.
Length = 668
Score = 123 bits (297), Expect = 6e-28
Identities = 58/140 (41%), Positives = 81/140 (57%)
Frame = +2
Query: 299 MTVTYTGEVATCRGFGTFLKVLYRWRGSIXXXXXXXXXXXXXXXXXXXXXXXXXXDENAK 478
MTVTY+ +VA FG F ++L +WRGSI K
Sbjct: 1 MTVTYSSKVANATFFG-FHRLLLKWRGSIYKLLYREFIVFAVLYTAISLVYRLLLTGVQK 59
Query: 479 RTFEGIVNYCHFHGNVIPLSFVLGFYVTVVMNRWWNQYTTIPWPDSIAVFVSATIHGQDE 658
R FE + YC + IP++FVLGFYVT+V+NRWWNQ+ +PWPD + +S+++HG DE
Sbjct: 60 RYFEKLSIYCDRYAEQIPVTFVLGFYVTLVVNRWWNQFVNLPWPDRLMFLISSSVHGSDE 119
Query: 659 RGRLMRRTIVRYVCLCLTMV 718
GRL+RRT++RYV L ++
Sbjct: 120 HGRLLRRTLMRYVNLTSLLI 139
>AK096459-1|BAC04797.1| 668|Homo sapiens protein ( Homo sapiens
cDNA FLJ39140 fis, clone NTONG2009233, moderately
similar to BESTROPHIN. ).
Length = 668
Score = 123 bits (297), Expect = 6e-28
Identities = 58/140 (41%), Positives = 81/140 (57%)
Frame = +2
Query: 299 MTVTYTGEVATCRGFGTFLKVLYRWRGSIXXXXXXXXXXXXXXXXXXXXXXXXXXDENAK 478
MTVTY+ +VA FG F ++L +WRGSI K
Sbjct: 1 MTVTYSSKVANATFFG-FHRLLLKWRGSIYKLLYREFIVFAVLYTAISLVYRLLLTGVQK 59
Query: 479 RTFEGIVNYCHFHGNVIPLSFVLGFYVTVVMNRWWNQYTTIPWPDSIAVFVSATIHGQDE 658
R FE + YC + IP++FVLGFYVT+V+NRWWNQ+ +PWPD + +S+++HG DE
Sbjct: 60 RYFEKLSIYCDRYAEQIPVTFVLGFYVTLVVNRWWNQFVNLPWPDRLMFLISSSVHGSDE 119
Query: 659 RGRLMRRTIVRYVCLCLTMV 718
GRL+RRT++RYV L ++
Sbjct: 120 HGRLLRRTLMRYVNLTSLLI 139
>AF440758-1|AAM76997.1| 398|Homo sapiens vitelliform macular
dystrophy 2-like protein 3 protein.
Length = 398
Score = 123 bits (297), Expect = 6e-28
Identities = 58/140 (41%), Positives = 81/140 (57%)
Frame = +2
Query: 299 MTVTYTGEVATCRGFGTFLKVLYRWRGSIXXXXXXXXXXXXXXXXXXXXXXXXXXDENAK 478
MTVTY+ +VA FG F ++L +WRGSI K
Sbjct: 1 MTVTYSSKVANATFFG-FHRLLLKWRGSIYKLLYREFIVFAVLYTAISLVYRLLLTGVQK 59
Query: 479 RTFEGIVNYCHFHGNVIPLSFVLGFYVTVVMNRWWNQYTTIPWPDSIAVFVSATIHGQDE 658
R FE + YC + IP++FVLGFYVT+V+NRWWNQ+ +PWPD + +S+++HG DE
Sbjct: 60 RYFEKLSIYCDRYAEQIPVTFVLGFYVTLVVNRWWNQFVNLPWPDRLMFLISSSVHGSDE 119
Query: 659 RGRLMRRTIVRYVCLCLTMV 718
GRL+RRT++RYV L ++
Sbjct: 120 HGRLLRRTLMRYVNLTSLLI 139
>AY515704-1|AAR99654.1| 585|Homo sapiens bestrophin 1 protein.
Length = 585
Score = 122 bits (294), Expect = 1e-27
Identities = 58/141 (41%), Positives = 80/141 (56%)
Frame = +2
Query: 299 MTVTYTGEVATCRGFGTFLKVLYRWRGSIXXXXXXXXXXXXXXXXXXXXXXXXXXDENAK 478
MT+TYT +VA R G+F ++L WRGSI E +
Sbjct: 1 MTITYTSQVANAR-LGSFSRLLLCWRGSIYKLLYGEFLIFLLCYYIIRFIYRLALTEEQQ 59
Query: 479 RTFEGIVNYCHFHGNVIPLSFVLGFYVTVVMNRWWNQYTTIPWPDSIAVFVSATIHGQDE 658
FE + YC + +IP+SFVLGFYVT+V+ RWWNQY +PWPD + VS + G+DE
Sbjct: 60 LMFEKLTLYCDSYIQLIPISFVLGFYVTLVVTRWWNQYENLPWPDRLMSLVSGFVEGKDE 119
Query: 659 RGRLMRRTIVRYVCLCLTMVL 721
+GRL+RRT++RY L ++L
Sbjct: 120 QGRLLRRTLIRYANLGNVLIL 140
>AF073501-1|AAC33766.1| 585|Homo sapiens vitelliform macular
dystrophy protein protein.
Length = 585
Score = 122 bits (294), Expect = 1e-27
Identities = 58/141 (41%), Positives = 80/141 (56%)
Frame = +2
Query: 299 MTVTYTGEVATCRGFGTFLKVLYRWRGSIXXXXXXXXXXXXXXXXXXXXXXXXXXDENAK 478
MT+TYT +VA R G+F ++L WRGSI E +
Sbjct: 1 MTITYTSQVANAR-LGSFSRLLLCWRGSIYKLLYGEFLIFLLCYYIIRFIYRLALTEEQQ 59
Query: 479 RTFEGIVNYCHFHGNVIPLSFVLGFYVTVVMNRWWNQYTTIPWPDSIAVFVSATIHGQDE 658
FE + YC + +IP+SFVLGFYVT+V+ RWWNQY +PWPD + VS + G+DE
Sbjct: 60 LMFEKLTLYCDSYIQLIPISFVLGFYVTLVVTRWWNQYENLPWPDRLMSLVSGFVEGKDE 119
Query: 659 RGRLMRRTIVRYVCLCLTMVL 721
+GRL+RRT++RY L ++L
Sbjct: 120 QGRLLRRTLIRYANLGNVLIL 140
>AF073500-1|AAC64926.1| 585|Homo sapiens vitelliform macular
dystrophy protein protein.
Length = 585
Score = 122 bits (294), Expect = 1e-27
Identities = 58/141 (41%), Positives = 80/141 (56%)
Frame = +2
Query: 299 MTVTYTGEVATCRGFGTFLKVLYRWRGSIXXXXXXXXXXXXXXXXXXXXXXXXXXDENAK 478
MT+TYT +VA R G+F ++L WRGSI E +
Sbjct: 1 MTITYTSQVANAR-LGSFSRLLLCWRGSIYKLLYGEFLIFLLCYYIIRFIYRLALTEEQQ 59
Query: 479 RTFEGIVNYCHFHGNVIPLSFVLGFYVTVVMNRWWNQYTTIPWPDSIAVFVSATIHGQDE 658
FE + YC + +IP+SFVLGFYVT+V+ RWWNQY +PWPD + VS + G+DE
Sbjct: 60 LMFEKLTLYCDSYIQLIPISFVLGFYVTLVVTRWWNQYENLPWPDRLMSLVSGFVEGKDE 119
Query: 659 RGRLMRRTIVRYVCLCLTMVL 721
+GRL+RRT++RY L ++L
Sbjct: 120 QGRLLRRTLIRYANLGNVLIL 140
>AF057170-1|AAC64344.1| 435|Homo sapiens bestrophin protein.
Length = 435
Score = 122 bits (294), Expect = 1e-27
Identities = 58/141 (41%), Positives = 80/141 (56%)
Frame = +2
Query: 299 MTVTYTGEVATCRGFGTFLKVLYRWRGSIXXXXXXXXXXXXXXXXXXXXXXXXXXDENAK 478
MT+TYT +VA R G+F ++L WRGSI E +
Sbjct: 1 MTITYTSQVANAR-LGSFSRLLLCWRGSIYKLLYGEFLIFLLCYYIIRFIYRLALTEEQQ 59
Query: 479 RTFEGIVNYCHFHGNVIPLSFVLGFYVTVVMNRWWNQYTTIPWPDSIAVFVSATIHGQDE 658
FE + YC + +IP+SFVLGFYVT+V+ RWWNQY +PWPD + VS + G+DE
Sbjct: 60 LMFEKLTLYCDSYIQLIPISFVLGFYVTLVVTRWWNQYENLPWPDRLMSLVSGFVEGKDE 119
Query: 659 RGRLMRRTIVRYVCLCLTMVL 721
+GRL+RRT++RY L ++L
Sbjct: 120 QGRLLRRTLIRYANLGNVLIL 140
>AF057169-1|AAC64343.1| 585|Homo sapiens bestrophin protein.
Length = 585
Score = 122 bits (294), Expect = 1e-27
Identities = 58/141 (41%), Positives = 80/141 (56%)
Frame = +2
Query: 299 MTVTYTGEVATCRGFGTFLKVLYRWRGSIXXXXXXXXXXXXXXXXXXXXXXXXXXDENAK 478
MT+TYT +VA R G+F ++L WRGSI E +
Sbjct: 1 MTITYTSQVANAR-LGSFSRLLLCWRGSIYKLLYGEFLIFLLCYYIIRFIYRLALTEEQQ 59
Query: 479 RTFEGIVNYCHFHGNVIPLSFVLGFYVTVVMNRWWNQYTTIPWPDSIAVFVSATIHGQDE 658
FE + YC + +IP+SFVLGFYVT+V+ RWWNQY +PWPD + VS + G+DE
Sbjct: 60 LMFEKLTLYCDSYIQLIPISFVLGFYVTLVVTRWWNQYENLPWPDRLMSLVSGFVEGKDE 119
Query: 659 RGRLMRRTIVRYVCLCLTMVL 721
+GRL+RRT++RY L ++L
Sbjct: 120 QGRLLRRTLIRYANLGNVLIL 140
>AK000139-1|BAA90970.1| 466|Homo sapiens protein ( Homo sapiens
cDNA FLJ20132 fis, clone COL06441. ).
Length = 466
Score = 108 bits (260), Expect = 2e-23
Identities = 45/85 (52%), Positives = 64/85 (75%)
Frame = +2
Query: 467 ENAKRTFEGIVNYCHFHGNVIPLSFVLGFYVTVVMNRWWNQYTTIPWPDSIAVFVSATIH 646
E KR FE +V YC + ++IP+SFVLGFYVT+V+NRWW+QY +P PD++ V+ T+H
Sbjct: 13 EGQKRYFEKLVIYCDQYASLIPVSFVLGFYVTLVVNRWWSQYLCMPLPDALMCVVAGTVH 72
Query: 647 GQDERGRLMRRTIVRYVCLCLTMVL 721
G+D+RGRL RRT++RY L ++L
Sbjct: 73 GRDDRGRLYRRTLMRYAGLSAVLIL 97
>BC041664-1|AAH41664.1| 604|Homo sapiens BEST1 protein protein.
Length = 604
Score = 101 bits (241), Expect = 3e-21
Identities = 41/79 (51%), Positives = 57/79 (72%)
Frame = +2
Query: 485 FEGIVNYCHFHGNVIPLSFVLGFYVTVVMNRWWNQYTTIPWPDSIAVFVSATIHGQDERG 664
FE + YC + +IP+SFVLGFYVT+V+ RWWNQY +PWPD + VS + G+DE+G
Sbjct: 2 FEKLTLYCDSYIQLIPISFVLGFYVTLVVTRWWNQYENLPWPDRLMSLVSGFVEGKDEQG 61
Query: 665 RLMRRTIVRYVCLCLTMVL 721
RL+RRT++RY L ++L
Sbjct: 62 RLLRRTLIRYANLGNVLIL 80
>BC015220-1|AAH15220.1| 498|Homo sapiens BEST1 protein protein.
Length = 498
Score = 101 bits (241), Expect = 3e-21
Identities = 41/79 (51%), Positives = 57/79 (72%)
Frame = +2
Query: 485 FEGIVNYCHFHGNVIPLSFVLGFYVTVVMNRWWNQYTTIPWPDSIAVFVSATIHGQDERG 664
FE + YC + +IP+SFVLGFYVT+V+ RWWNQY +PWPD + VS + G+DE+G
Sbjct: 2 FEKLTLYCDSYIQLIPISFVLGFYVTLVVTRWWNQYENLPWPDRLMSLVSGFVEGKDEQG 61
Query: 665 RLMRRTIVRYVCLCLTMVL 721
RL+RRT++RY L ++L
Sbjct: 62 RLLRRTLIRYANLGNVLIL 80
>AB209451-1|BAD92688.1| 376|Homo sapiens bestrophin variant
protein.
Length = 376
Score = 80.6 bits (190), Expect = 5e-15
Identities = 31/58 (53%), Positives = 43/58 (74%)
Frame = +2
Query: 548 GFYVTVVMNRWWNQYTTIPWPDSIAVFVSATIHGQDERGRLMRRTIVRYVCLCLTMVL 721
GFYVT+V+ RWWNQY +PWPD + VS + G+DE+GRL+RRT++RY L ++L
Sbjct: 102 GFYVTLVVTRWWNQYENLPWPDRLMSLVSGFVEGKDEQGRLLRRTLIRYANLGNVLIL 159
>BC006440-1|AAH06440.1| 72|Homo sapiens BEST3 protein protein.
Length = 72
Score = 40.3 bits (90), Expect = 0.007
Identities = 15/30 (50%), Positives = 24/30 (80%)
Frame = +2
Query: 629 VSATIHGQDERGRLMRRTIVRYVCLCLTMV 718
+S+++HG DE GRL+RRT++RYV L ++
Sbjct: 4 ISSSVHGSDEHGRLLRRTLMRYVNLTSLLI 33
>BC017418-1|AAH17418.1| 249|Homo sapiens Unknown (protein for
IMAGE:4672457) protein.
Length = 249
Score = 33.1 bits (72), Expect = 1.0
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = -2
Query: 258 VISETLHFPRIQFNNYNVEHVTVVSIT-LYSLNKYTFQLKSFPNLNV*HNINTDQFPKVY 82
VI +T+ R QF Y +E +++ + L + ++ F LK PN+ + D PK
Sbjct: 158 VIKQTMERERQQFEGYGLEIPDILNASNLKTFREWDFDLKKLPNIKMRKICANDAIPKTC 217
Query: 81 K 79
K
Sbjct: 218 K 218
>BC011842-1|AAH11842.1| 203|Homo sapiens hypothetical protein
FLJ11184 protein.
Length = 203
Score = 33.1 bits (72), Expect = 1.0
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = -2
Query: 258 VISETLHFPRIQFNNYNVEHVTVVSIT-LYSLNKYTFQLKSFPNLNV*HNINTDQFPKVY 82
VI +T+ R QF Y +E +++ + L + ++ F LK PN+ + D PK
Sbjct: 112 VIKQTMERERQQFEGYGLEIPDILNASNLKTFREWDFDLKKLPNIKMRKICANDAIPKTC 171
Query: 81 K 79
K
Sbjct: 172 K 172
>BC005204-1|AAH05204.1| 240|Homo sapiens Unknown (protein for
IMAGE:3829877) protein.
Length = 240
Score = 33.1 bits (72), Expect = 1.0
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = -2
Query: 258 VISETLHFPRIQFNNYNVEHVTVVSIT-LYSLNKYTFQLKSFPNLNV*HNINTDQFPKVY 82
VI +T+ R QF Y +E +++ + L + ++ F LK PN+ + D PK
Sbjct: 149 VIKQTMERERQQFEGYGLEIPDILNASNLKTFREWDFDLKKLPNIKMRKICANDAIPKTC 208
Query: 81 K 79
K
Sbjct: 209 K 209
>AK002046-1|BAA92053.1| 203|Homo sapiens protein ( Homo sapiens
cDNA FLJ11184 fis, clone PLACE1007507. ).
Length = 203
Score = 33.1 bits (72), Expect = 1.0
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = -2
Query: 258 VISETLHFPRIQFNNYNVEHVTVVSIT-LYSLNKYTFQLKSFPNLNV*HNINTDQFPKVY 82
VI +T+ R QF Y +E +++ + L + ++ F LK PN+ + D PK
Sbjct: 112 VIKQTMERERQQFEGYGLEIPDILNASNLKTFREWDFDLKKLPNIKMRKICANDAIPKTC 171
Query: 81 K 79
K
Sbjct: 172 K 172
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,503,153
Number of Sequences: 237096
Number of extensions: 1889376
Number of successful extensions: 2769
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 2704
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2745
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8567175942
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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