Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt4j22
(739 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC017708-1|AAH17708.1| 375|Homo sapiens ubiquitin-conjugating e... 58 4e-08
BC107057-1|AAI07058.1| 341|Homo sapiens UBE2Q1 protein protein. 55 3e-07
AY948200-1|AAY23342.1| 422|Homo sapiens galactosyl transferase-... 55 3e-07
AY112698-1|AAM60814.1| 422|Homo sapiens ubiquitin-conjugating e... 55 3e-07
AL592078-5|CAI16186.1| 422|Homo sapiens ubiquitin-conjugating e... 55 3e-07
BC061583-1|AAH61583.1| 223|Homo sapiens UBE2Q1 protein protein. 36 0.11
BC087836-1|AAH87836.1| 256|Homo sapiens UBE2Q1 protein protein. 34 0.46
BC070158-1|AAH70158.1| 294|Homo sapiens UBE2Q1 protein protein. 34 0.46
BC000848-1|AAH00848.1| 230|Homo sapiens UBE2Q1 protein protein. 34 0.46
AK056388-1|BAB71173.1| 217|Homo sapiens protein ( Homo sapiens ... 34 0.46
BC006827-1|AAH06827.1| 199|Homo sapiens UBE2Q2 protein protein. 33 1.4
>BC017708-1|AAH17708.1| 375|Homo sapiens ubiquitin-conjugating
enzyme E2Q (putative) 2 protein.
Length = 375
Score = 57.6 bits (133), Expect = 4e-08
Identities = 39/143 (27%), Positives = 68/143 (47%)
Frame = +3
Query: 309 ETYPTTPPVWFAESEDPIVTNAVQILTNTQGRDNHVINQVGILLRELCKLHGVPEXXXXX 488
E+YP++ P+WF +SEDP +T+ ++ L +T+ +N + Q+ L+ ELC L+ +P+
Sbjct: 61 ESYPSSSPIWFVDSEDPNLTSVLERLEDTK-NNNLLRQQLKWLICELCSLYNLPKHLDVE 119
Query: 489 XXXXXVHPAPPQHRVPSVTSNXXXXXXXXXXXXXXXXXXXXXXXXLPLEMVEDAGRSXKD 668
+ P VTS + E +S +
Sbjct: 120 MLDQPL-PTGQNGTTEEVTSE-----EEEEEEEMAEDIEDLDHYEMKEEEPISGKKSEDE 173
Query: 669 DMETEHLATLERLRQNQRQDYLS 737
+E E+LA LE++R+ QRQD+L+
Sbjct: 174 GIEKENLAILEKIRKTQRQDHLN 196
>BC107057-1|AAI07058.1| 341|Homo sapiens UBE2Q1 protein protein.
Length = 341
Score = 54.8 bits (126), Expect = 3e-07
Identities = 34/143 (23%), Positives = 64/143 (44%)
Frame = +3
Query: 309 ETYPTTPPVWFAESEDPIVTNAVQILTNTQGRDNHVINQVGILLRELCKLHGVPEXXXXX 488
E+YP PP+W ES+DP + ++ L + + + ++ + ++ +LCKL+ +P+
Sbjct: 29 ESYPAVPPIWSVESDDPNLAAVLERLVDIKKGNTLLLQHLKRIISDLCKLYNLPQHPDVE 88
Query: 489 XXXXXVHPAPPQHRVPSVTSNXXXXXXXXXXXXXXXXXXXXXXXXLPLEMVEDAGRSXKD 668
P P + S+ + E + +S D
Sbjct: 89 MLD---QPLPAEQCTQEDVSS------EDEDEEMPEDTEDLDHYEMKEEEPAEGKKSEDD 139
Query: 669 DMETEHLATLERLRQNQRQDYLS 737
+ E+LA LE++++NQRQDYL+
Sbjct: 140 GIGKENLAILEKIKKNQRQDYLN 162
>AY948200-1|AAY23342.1| 422|Homo sapiens galactosyl
transferase-associated protein protein.
Length = 422
Score = 54.8 bits (126), Expect = 3e-07
Identities = 34/143 (23%), Positives = 64/143 (44%)
Frame = +3
Query: 309 ETYPTTPPVWFAESEDPIVTNAVQILTNTQGRDNHVINQVGILLRELCKLHGVPEXXXXX 488
E+YP PP+W ES+DP + ++ L + + + ++ + ++ +LCKL+ +P+
Sbjct: 110 ESYPAVPPIWSVESDDPNLAAVLERLVDIKKGNTLLLQHLKRIISDLCKLYNLPQHPDVE 169
Query: 489 XXXXXVHPAPPQHRVPSVTSNXXXXXXXXXXXXXXXXXXXXXXXXLPLEMVEDAGRSXKD 668
P P + S+ + E + +S D
Sbjct: 170 MLD---QPLPAEQCTQEDVSS------EDEDEEMPEDTEDLDHYEMKEEEPAEGKKSEDD 220
Query: 669 DMETEHLATLERLRQNQRQDYLS 737
+ E+LA LE++++NQRQDYL+
Sbjct: 221 GIGKENLAILEKIKKNQRQDYLN 243
>AY112698-1|AAM60814.1| 422|Homo sapiens ubiquitin-conjugating
enzyme E2Q protein.
Length = 422
Score = 54.8 bits (126), Expect = 3e-07
Identities = 34/143 (23%), Positives = 64/143 (44%)
Frame = +3
Query: 309 ETYPTTPPVWFAESEDPIVTNAVQILTNTQGRDNHVINQVGILLRELCKLHGVPEXXXXX 488
E+YP PP+W ES+DP + ++ L + + + ++ + ++ +LCKL+ +P+
Sbjct: 110 ESYPAVPPIWSVESDDPNLAAVLERLVDIKKGNTLLLQHLKRIISDLCKLYNLPQHPDVE 169
Query: 489 XXXXXVHPAPPQHRVPSVTSNXXXXXXXXXXXXXXXXXXXXXXXXLPLEMVEDAGRSXKD 668
P P + S+ + E + +S D
Sbjct: 170 MLD---QPLPAEQCTQEDVSS------EDEDEEMPEDTEDLDHYEMKEEEPAEGKKSEDD 220
Query: 669 DMETEHLATLERLRQNQRQDYLS 737
+ E+LA LE++++NQRQDYL+
Sbjct: 221 GIGKENLAILEKIKKNQRQDYLN 243
>AL592078-5|CAI16186.1| 422|Homo sapiens ubiquitin-conjugating
enzyme E2Q (putative) 1 protein.
Length = 422
Score = 54.8 bits (126), Expect = 3e-07
Identities = 34/143 (23%), Positives = 64/143 (44%)
Frame = +3
Query: 309 ETYPTTPPVWFAESEDPIVTNAVQILTNTQGRDNHVINQVGILLRELCKLHGVPEXXXXX 488
E+YP PP+W ES+DP + ++ L + + + ++ + ++ +LCKL+ +P+
Sbjct: 110 ESYPAVPPIWSVESDDPNLAAVLERLVDIKKGNTLLLQHLKRIISDLCKLYNLPQHPDVE 169
Query: 489 XXXXXVHPAPPQHRVPSVTSNXXXXXXXXXXXXXXXXXXXXXXXXLPLEMVEDAGRSXKD 668
P P + S+ + E + +S D
Sbjct: 170 MLD---QPLPAEQCTQEDVSS------EDEDEEMPEDTEDLDHYEMKEEEPAEGKKSEDD 220
Query: 669 DMETEHLATLERLRQNQRQDYLS 737
+ E+LA LE++++NQRQDYL+
Sbjct: 221 GIGKENLAILEKIKKNQRQDYLN 243
>BC061583-1|AAH61583.1| 223|Homo sapiens UBE2Q1 protein protein.
Length = 223
Score = 36.3 bits (80), Expect = 0.11
Identities = 19/41 (46%), Positives = 29/41 (70%), Gaps = 4/41 (9%)
Frame = +3
Query: 627 PLEMVEDA---GRSXKDD-METEHLATLERLRQNQRQDYLS 737
P EM E+ G+ +DD + E+LA LE++++NQRQDYL+
Sbjct: 4 PYEMKEEEPAEGKKSEDDGIGKENLAILEKIKKNQRQDYLN 44
>BC087836-1|AAH87836.1| 256|Homo sapiens UBE2Q1 protein protein.
Length = 256
Score = 34.3 bits (75), Expect = 0.46
Identities = 14/28 (50%), Positives = 22/28 (78%)
Frame = +3
Query: 654 RSXKDDMETEHLATLERLRQNQRQDYLS 737
+S D + E+LA LE++++NQRQDYL+
Sbjct: 50 KSEDDGIGKENLAILEKIKKNQRQDYLN 77
>BC070158-1|AAH70158.1| 294|Homo sapiens UBE2Q1 protein protein.
Length = 294
Score = 34.3 bits (75), Expect = 0.46
Identities = 14/28 (50%), Positives = 22/28 (78%)
Frame = +3
Query: 654 RSXKDDMETEHLATLERLRQNQRQDYLS 737
+S D + E+LA LE++++NQRQDYL+
Sbjct: 88 KSEDDGIGKENLAILEKIKKNQRQDYLN 115
>BC000848-1|AAH00848.1| 230|Homo sapiens UBE2Q1 protein protein.
Length = 230
Score = 34.3 bits (75), Expect = 0.46
Identities = 14/28 (50%), Positives = 22/28 (78%)
Frame = +3
Query: 654 RSXKDDMETEHLATLERLRQNQRQDYLS 737
+S D + E+LA LE++++NQRQDYL+
Sbjct: 24 KSEDDGIGKENLAILEKIKKNQRQDYLN 51
>AK056388-1|BAB71173.1| 217|Homo sapiens protein ( Homo sapiens
cDNA FLJ31826 fis, clone NT2RP6000086, highly similar to
Homo sapiens mRNA for NICE-5 protein. ).
Length = 217
Score = 34.3 bits (75), Expect = 0.46
Identities = 14/28 (50%), Positives = 22/28 (78%)
Frame = +3
Query: 654 RSXKDDMETEHLATLERLRQNQRQDYLS 737
+S D + E+LA LE++++NQRQDYL+
Sbjct: 11 KSEDDGIGKENLAILEKIKKNQRQDYLN 38
>BC006827-1|AAH06827.1| 199|Homo sapiens UBE2Q2 protein protein.
Length = 199
Score = 32.7 bits (71), Expect = 1.4
Identities = 14/31 (45%), Positives = 25/31 (80%), Gaps = 1/31 (3%)
Frame = +3
Query: 648 AGRSXKDD-METEHLATLERLRQNQRQDYLS 737
+G+ +D+ +E E+LA LE++R+ QRQD+L+
Sbjct: 51 SGKKSEDEGIEKENLAILEKIRKTQRQDHLN 81
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,799,999
Number of Sequences: 237096
Number of extensions: 1917397
Number of successful extensions: 3635
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3556
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3635
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8791154398
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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