Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt4j21
(709 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z77659-4|CAB01163.1| 507|Caenorhabditis elegans Hypothetical pr... 176 1e-44
AF047653-6|AAC04462.2| 463|Caenorhabditis elegans Hypothetical ... 57 1e-08
Z37093-3|CAA85465.1| 448|Caenorhabditis elegans Hypothetical pr... 40 0.002
Z49937-1|CAA90184.2| 670|Caenorhabditis elegans Hypothetical pr... 32 0.35
Z92822-8|CAL49447.1| 1383|Caenorhabditis elegans Hypothetical pr... 31 0.81
Z82094-4|CAL49445.1| 1383|Caenorhabditis elegans Hypothetical pr... 31 0.81
U29612-8|AAW57827.1| 108|Caenorhabditis elegans Heat shock prot... 31 0.81
U29612-7|AAO61437.1| 205|Caenorhabditis elegans Heat shock prot... 31 0.81
U29612-6|AAA68804.1| 219|Caenorhabditis elegans Heat shock prot... 31 0.81
DQ314286-1|ABC42046.1| 1383|Caenorhabditis elegans DYF-2 protein. 31 0.81
Z81052-1|CAB02872.1| 1175|Caenorhabditis elegans Hypothetical pr... 31 1.1
AF237467-1|AAF60326.1| 1175|Caenorhabditis elegans pyruvate carb... 31 1.1
AF025469-5|AAG00029.1| 2054|Caenorhabditis elegans Hypothetical ... 29 2.5
AF025469-6|AAR12979.1| 813|Caenorhabditis elegans Hypothetical ... 29 4.3
AF088288-1|AAC98295.1| 826|Caenorhabditis elegans caspase-relat... 28 5.7
AC084197-7|AAM44398.1| 826|Caenorhabditis elegans Caspase prote... 28 5.7
AC024201-2|AAK82924.1| 556|Caenorhabditis elegans Abnormal cell... 27 9.9
>Z77659-4|CAB01163.1| 507|Caenorhabditis elegans Hypothetical
protein F23B12.5 protein.
Length = 507
Score = 176 bits (428), Expect = 1e-44
Identities = 84/116 (72%), Positives = 98/116 (84%), Gaps = 2/116 (1%)
Frame = +1
Query: 259 QMRYYSS--LPSHIKVNLPALSPTMESGSIVSWEKKEGDKLSEGDLLCEIETDKATMGFE 432
Q+R YSS LP H +V LPALSPTME G++VSW+KKEGD+LSEGDLLCEIETDKATMGFE
Sbjct: 65 QVRLYSSGNLPKHNRVALPALSPTMELGTVVSWQKKEGDQLSEGDLLCEIETDKATMGFE 124
Query: 433 TPEEGYLAKILIPAGTKGVPVGKLLCIIVGDQNDVAAFKDFKDDSSPATPQKPASQ 600
TPEEGYLAKILI G+K VP+GKLLCIIV ++ DVAAFKDFKDD + + PA++
Sbjct: 125 TPEEGYLAKILIQEGSKDVPIGKLLCIIVDNEADVAAFKDFKDDGASSGGSAPAAE 180
>AF047653-6|AAC04462.2| 463|Caenorhabditis elegans Hypothetical
protein W02F12.5 protein.
Length = 463
Score = 56.8 bits (131), Expect = 1e-08
Identities = 45/158 (28%), Positives = 78/158 (49%), Gaps = 3/158 (1%)
Frame = +1
Query: 130 LKKAIRSNITRCISTELAKRKVTNKLLEHAQNQTVLSTPQWTVQMRYYSSLPSHIKVNLP 309
L +A R ++T S + + + T+ L QN + S+ + + S + I V P
Sbjct: 13 LSRAARQSVTAASSAQPSLQAKTSLLEPLVQNVRITSSANFHMSAVRMSDV---ITVEGP 69
Query: 310 ALSPTMESGSIVSWEKKEGDKLSEGDLLCEIETDKATMGFETPEEGYLAKILIPAGTKGV 489
A + ++ G I W K++GD ++E +L+ EIETDK ++ P+ G + + L+ G K
Sbjct: 70 AFAESISEGDI-RWLKQKGDHVNEDELVAEIETDKTSVEVPAPQAGTIVEFLVEDGAKVT 128
Query: 490 PVGKLLCII--VGDQNDVAAFKDFKDDSSPATPQ-KPA 594
KL + G + A K+ + S+PA + KPA
Sbjct: 129 AKQKLYKLQPGAGGGSSSAPAKE-EPKSAPAKEESKPA 165
>Z37093-3|CAA85465.1| 448|Caenorhabditis elegans Hypothetical
protein ZK669.4 protein.
Length = 448
Score = 39.5 bits (88), Expect = 0.002
Identities = 24/86 (27%), Positives = 45/86 (52%)
Frame = +1
Query: 340 IVSWEKKEGDKLSEGDLLCEIETDKATMGFETPEEGYLAKILIPAGTKGVPVGKLLCIIV 519
+ W KEGD +S+ D +CE+++DKA + +G + K+ VG+ L I V
Sbjct: 47 VKEWYVKEGDTISQFDKVCEVQSDKAAVTISCRYDGIVKKLYHEVDGM-ARVGQAL-IDV 104
Query: 520 GDQNDVAAFKDFKDDSSPATPQKPAS 597
+ +V + K +++ ++P+ P S
Sbjct: 105 EIEGNVEEPEQPKKEAASSSPEAPKS 130
>Z49937-1|CAA90184.2| 670|Caenorhabditis elegans Hypothetical
protein F14F3.2 protein.
Length = 670
Score = 32.3 bits (70), Expect = 0.35
Identities = 24/84 (28%), Positives = 37/84 (44%), Gaps = 1/84 (1%)
Frame = +2
Query: 359 RKGTNLVKAIFCARLKLTKQLWALRHLKKVTWPKY*FRPVQRECLSGNYCALLLEIRMML 538
+KGT + FC L + LRHL+K W + R V L+ + ++ E +
Sbjct: 32 KKGTVICSECFCFHSYLGPSVSYLRHLRKSAWDEEHIRLV--HALNTSNTNMIWESALYE 89
Query: 539 RHSKISK-MTHHLQHLKNRLVKIK 607
+K K M H+K + VK K
Sbjct: 90 GSTKFQKPMAQDPSHIKEQFVKEK 113
>Z92822-8|CAL49447.1| 1383|Caenorhabditis elegans Hypothetical
protein ZK520.3a protein.
Length = 1383
Score = 31.1 bits (67), Expect = 0.81
Identities = 19/77 (24%), Positives = 33/77 (42%)
Frame = +1
Query: 367 DKLSEGDLLCEIETDKATMGFETPEEGYLAKILIPAGTKGVPVGKLLCIIVGDQNDVAAF 546
D+L+ +L EIET+K E E+G L + +G + V K+ + N +
Sbjct: 325 DELTTVTMLTEIETEKNLSEIEVTEDGQLVAVSSQSGVLSIFVTKMPTLAASYNNSICYL 384
Query: 547 KDFKDDSSPATPQKPAS 597
+ + A +K S
Sbjct: 385 TNLTQVTVVAEVEKKGS 401
>Z82094-4|CAL49445.1| 1383|Caenorhabditis elegans Hypothetical
protein ZK520.3a protein.
Length = 1383
Score = 31.1 bits (67), Expect = 0.81
Identities = 19/77 (24%), Positives = 33/77 (42%)
Frame = +1
Query: 367 DKLSEGDLLCEIETDKATMGFETPEEGYLAKILIPAGTKGVPVGKLLCIIVGDQNDVAAF 546
D+L+ +L EIET+K E E+G L + +G + V K+ + N +
Sbjct: 325 DELTTVTMLTEIETEKNLSEIEVTEDGQLVAVSSQSGVLSIFVTKMPTLAASYNNSICYL 384
Query: 547 KDFKDDSSPATPQKPAS 597
+ + A +K S
Sbjct: 385 TNLTQVTVVAEVEKKGS 401
>U29612-8|AAW57827.1| 108|Caenorhabditis elegans Heat shock protein
protein 25,isoform c protein.
Length = 108
Score = 31.1 bits (67), Expect = 0.81
Identities = 20/78 (25%), Positives = 36/78 (46%)
Frame = +1
Query: 121 SDGLKKAIRSNITRCISTELAKRKVTNKLLEHAQNQTVLSTPQWTVQMRYYSSLPSHIKV 300
SDG +R ++ E+ + + N+LL HA+++ TPQ TV Y
Sbjct: 23 SDGKTLRLRFDVANYKPEEVTVKTIDNRLLVHAKHEE--KTPQRTVFREYNQEFLLPRGT 80
Query: 301 NLPALSPTMESGSIVSWE 354
N +S T+ + +++ E
Sbjct: 81 NPEQISSTLSTDGVLTVE 98
>U29612-7|AAO61437.1| 205|Caenorhabditis elegans Heat shock protein
protein 25,isoform b protein.
Length = 205
Score = 31.1 bits (67), Expect = 0.81
Identities = 20/78 (25%), Positives = 36/78 (46%)
Frame = +1
Query: 121 SDGLKKAIRSNITRCISTELAKRKVTNKLLEHAQNQTVLSTPQWTVQMRYYSSLPSHIKV 300
SDG +R ++ E+ + + N+LL HA+++ TPQ TV Y
Sbjct: 120 SDGKTLRLRFDVANYKPEEVTVKTIDNRLLVHAKHEE--KTPQRTVFREYNQEFLLPRGT 177
Query: 301 NLPALSPTMESGSIVSWE 354
N +S T+ + +++ E
Sbjct: 178 NPEQISSTLSTDGVLTVE 195
>U29612-6|AAA68804.1| 219|Caenorhabditis elegans Heat shock protein
protein 25,isoform a protein.
Length = 219
Score = 31.1 bits (67), Expect = 0.81
Identities = 20/78 (25%), Positives = 36/78 (46%)
Frame = +1
Query: 121 SDGLKKAIRSNITRCISTELAKRKVTNKLLEHAQNQTVLSTPQWTVQMRYYSSLPSHIKV 300
SDG +R ++ E+ + + N+LL HA+++ TPQ TV Y
Sbjct: 134 SDGKTLRLRFDVANYKPEEVTVKTIDNRLLVHAKHEE--KTPQRTVFREYNQEFLLPRGT 191
Query: 301 NLPALSPTMESGSIVSWE 354
N +S T+ + +++ E
Sbjct: 192 NPEQISSTLSTDGVLTVE 209
>DQ314286-1|ABC42046.1| 1383|Caenorhabditis elegans DYF-2 protein.
Length = 1383
Score = 31.1 bits (67), Expect = 0.81
Identities = 19/77 (24%), Positives = 33/77 (42%)
Frame = +1
Query: 367 DKLSEGDLLCEIETDKATMGFETPEEGYLAKILIPAGTKGVPVGKLLCIIVGDQNDVAAF 546
D+L+ +L EIET+K E E+G L + +G + V K+ + N +
Sbjct: 325 DELTTVTMLTEIETEKNLSEIEVTEDGQLVAVSSQSGVLSIFVTKMPTLAASYNNSICYL 384
Query: 547 KDFKDDSSPATPQKPAS 597
+ + A +K S
Sbjct: 385 TNLTQVTVVAEVEKKGS 401
>Z81052-1|CAB02872.1| 1175|Caenorhabditis elegans Hypothetical protein
D2023.2 protein.
Length = 1175
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = +1
Query: 334 GSIVSWEKKEGDKLSEGDLLCEIETDKATMGFETPEEGYLAKILIPAGTK 483
G ++ + KEGDK+++ L + K M ++P G + I P GTK
Sbjct: 1114 GDVLELKIKEGDKVTKKQPLFVLSAMKMEMVIDSPIAGTVKAIHAPQGTK 1163
>AF237467-1|AAF60326.1| 1175|Caenorhabditis elegans pyruvate
carboxylase protein.
Length = 1175
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = +1
Query: 334 GSIVSWEKKEGDKLSEGDLLCEIETDKATMGFETPEEGYLAKILIPAGTK 483
G ++ + KEGDK+++ L + K M ++P G + I P GTK
Sbjct: 1114 GDVLELKIKEGDKVTKKQPLFVLSAMKMEMVIDSPIAGTVKAIHAPQGTK 1163
>AF025469-5|AAG00029.1| 2054|Caenorhabditis elegans Hypothetical
protein W09B6.1a protein.
Length = 2054
Score = 29.5 bits (63), Expect = 2.5
Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Frame = +1
Query: 331 SGSIVSWEKKEGDKLSEGDLLCEIETDKATMGFETPE-EGYLAKILIPAGTKGVPV--GK 501
+G ++ W+K++GD L+ GD+ E+ K E + G L +++ +G P+ G
Sbjct: 694 TGKLLQWKKEDGDWLNVGDVYATAESMKMVFQVEVAKAPGRLQRVV----NEGDPIHPGS 749
Query: 502 LLCIIVGDQNDVAA 543
+L +V DQ + A
Sbjct: 750 VLAKLV-DQTESEA 762
>AF025469-6|AAR12979.1| 813|Caenorhabditis elegans Hypothetical
protein W09B6.1b protein.
Length = 813
Score = 28.7 bits (61), Expect = 4.3
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +1
Query: 331 SGSIVSWEKKEGDKLSEGDLLCEIETDKATMGFE 432
+G ++ W+K++GD L+ GD+ E+ K E
Sbjct: 694 TGKLLQWKKEDGDWLNVGDVYATAESMKMVFQVE 727
>AF088288-1|AAC98295.1| 826|Caenorhabditis elegans caspase-related
protein 2A protein.
Length = 826
Score = 28.3 bits (60), Expect = 5.7
Identities = 24/101 (23%), Positives = 44/101 (43%)
Frame = +1
Query: 118 LSDGLKKAIRSNITRCISTELAKRKVTNKLLEHAQNQTVLSTPQWTVQMRYYSSLPSHIK 297
L +G+ I N+T +S L + KV+ + + + + + T T ++S P I
Sbjct: 74 LEEGVNDVIEENVTHVVS--LREAKVSGMMTDLTRFRQEIFTKHLT-----FNSNPESID 126
Query: 298 VNLPALSPTMESGSIVSWEKKEGDKLSEGDLLCEIETDKAT 420
+ +S + +W + ++L E D LC E D T
Sbjct: 127 AATKNVQNVKQS--LDTWRDRIKERLDEIDRLCTEEGDSLT 165
>AC084197-7|AAM44398.1| 826|Caenorhabditis elegans Caspase protein
2 protein.
Length = 826
Score = 28.3 bits (60), Expect = 5.7
Identities = 24/101 (23%), Positives = 44/101 (43%)
Frame = +1
Query: 118 LSDGLKKAIRSNITRCISTELAKRKVTNKLLEHAQNQTVLSTPQWTVQMRYYSSLPSHIK 297
L +G+ I N+T +S L + KV+ + + + + + T T ++S P I
Sbjct: 74 LEEGVNDVIEENVTHVVS--LREAKVSGMMTDLTRFRQEIFTKHLT-----FNSNPESID 126
Query: 298 VNLPALSPTMESGSIVSWEKKEGDKLSEGDLLCEIETDKAT 420
+ +S + +W + ++L E D LC E D T
Sbjct: 127 AATKNVQNVKQS--LDTWRDRIKERLDEIDRLCTEEGDSLT 165
>AC024201-2|AAK82924.1| 556|Caenorhabditis elegans Abnormal cell
lineage protein 17,isoform b protein.
Length = 556
Score = 27.5 bits (58), Expect = 9.9
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -2
Query: 198 RNFPFCQFCTNAPRNVRPYSFLKT 127
+NF FC C++AP V+P + T
Sbjct: 503 KNFIFCGMCSSAPVKVKPNRAINT 526
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,750,027
Number of Sequences: 27780
Number of extensions: 313791
Number of successful extensions: 893
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 875
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 893
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1645110168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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