Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt4i22
(710 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 46 3e-07
DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex det... 27 0.18
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot... 23 2.9
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 22 6.6
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 22 6.6
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 46.4 bits (105), Expect = 3e-07
Identities = 42/135 (31%), Positives = 63/135 (46%)
Frame = +3
Query: 291 IAISFKSNRVIEIEDDAFRNIPRLVYLDLSNNKISGQVLRSEIFQGPYEDGIYREIALET 470
I ++ N + I+ F+++ L LDL NN I + S F Y L T
Sbjct: 338 IVLNLSYNMLTHIDARMFKDLFFLQILDLRNNSIDR--IESNAFLPLYN--------LHT 387
Query: 471 LNLGYNEIHSLDRYLFKYTPNLTRLYLNNNPIEILDHVSILAISSATNLEVLDLSKTDID 650
L L N++ ++ LF L RL L+ N I +D LA + ++L+ LDLS ++
Sbjct: 388 LELSDNKLRTVGAQLFNGLFVLNRLTLSGNAIASIDP---LAFRNCSDLKELDLSGNELT 444
Query: 651 SIPLDAFRGLVKFTT 695
S+P DA R L T
Sbjct: 445 SVP-DALRDLALLKT 458
Score = 40.3 bits (90), Expect = 2e-05
Identities = 33/123 (26%), Positives = 56/123 (45%)
Frame = +3
Query: 312 NRVIEIEDDAFRNIPRLVYLDLSNNKISGQVLRSEIFQGPYEDGIYREIALETLNLGYNE 491
N + ++ F + +L+ L+L+ N++ + F G I L LNL YN
Sbjct: 295 NGLRDLPKGIFTRLEQLLVLNLAGNRLGSDRVDETTFLGL--------IRLIVLNLSYNM 346
Query: 492 IHSLDRYLFKYTPNLTRLYLNNNPIEILDHVSILAISSATNLEVLDLSKTDIDSIPLDAF 671
+ +D +FK L L L NN I+ ++ + L + NL L+LS + ++ F
Sbjct: 347 LTHIDARMFKDLFFLQILDLRNNSIDRIESNAFLPL---YNLHTLELSDNKLRTVGAQLF 403
Query: 672 RGL 680
GL
Sbjct: 404 NGL 406
Score = 39.9 bits (89), Expect = 2e-05
Identities = 39/142 (27%), Positives = 63/142 (44%)
Frame = +3
Query: 285 NRIAISFKSNRVIEIEDDAFRNIPRLVYLDLSNNKISGQVLRSEIFQGPYEDGIYREIAL 464
NR+ +S N + I+ AFRN L LDLS N+++ D + L
Sbjct: 410 NRLTLS--GNAIASIDPLAFRNCSDLKELDLSGNELTS-----------VPDALRDLALL 456
Query: 465 ETLNLGYNEIHSLDRYLFKYTPNLTRLYLNNNPIEILDHVSILAISSATNLEVLDLSKTD 644
+TL+LG N I + F+ LT L L N I ++S + NL++L+L++
Sbjct: 457 KTLDLGENRISNFYNGSFRNLDQLTGLRLIGNDI---GNLSRGMLWDLPNLQILNLARNK 513
Query: 645 IDSIPLDAFRGLVKFTTDRFIG 710
+ + AF ++ R G
Sbjct: 514 VQHVERYAFERNMRLEAIRLDG 535
Score = 37.5 bits (83), Expect = 1e-04
Identities = 31/113 (27%), Positives = 56/113 (49%)
Frame = +3
Query: 312 NRVIEIEDDAFRNIPRLVYLDLSNNKISGQVLRSEIFQGPYEDGIYREIALETLNLGYNE 491
NR+ + +FRN+ +L L L N I G + R ++ P L+ LNL N+
Sbjct: 464 NRISNFYNGSFRNLDQLTGLRLIGNDI-GNLSRGMLWDLPN---------LQILNLARNK 513
Query: 492 IHSLDRYLFKYTPNLTRLYLNNNPIEILDHVSILAISSATNLEVLDLSKTDID 650
+ ++RY F+ L + L+ N + ++ V +S +L +L+LS+ I+
Sbjct: 514 VQHVERYAFERNMRLEAIRLDGNFLSDINGV----FTSIASLLLLNLSENHIE 562
Score = 34.7 bits (76), Expect = 9e-04
Identities = 22/67 (32%), Positives = 36/67 (53%)
Frame = +3
Query: 462 LETLNLGYNEIHSLDRYLFKYTPNLTRLYLNNNPIEILDHVSILAISSATNLEVLDLSKT 641
L+ L+L N I L + F+ +L LYL NN I + +++ L + S LE+L LS
Sbjct: 844 LQILHLEDNRIRELKGFEFERLSHLRELYLQNNLIGFIGNLTFLPLRS---LEILRLSGN 900
Query: 642 DIDSIPL 662
+ + P+
Sbjct: 901 RLVTFPV 907
>DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 27.1 bits (57), Expect = 0.18
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +3
Query: 474 NLGYNEIHSLDRYLFKYTPNLTRLYLNNNPIE 569
+L IH+ + Y + Y N +LY N N IE
Sbjct: 84 SLSNKTIHNNNNYKYNYNNNCKKLYYNINYIE 115
>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
protein.
Length = 1010
Score = 23.0 bits (47), Expect = 2.9
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = -2
Query: 361 NRGMFLKASSSISITRFDLKLIAILFPGI 275
N G FLKA + +TR D + +++FP +
Sbjct: 132 NEGQFLKAFVAAVLTRQDTQ--SVIFPPV 158
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 21.8 bits (44), Expect = 6.6
Identities = 7/21 (33%), Positives = 13/21 (61%)
Frame = +3
Query: 105 PCDISVEDTSNLTLNCSRRDI 167
P D+SVE ++ L+C + +
Sbjct: 716 PTDVSVERNKHVALHCQAQGV 736
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 21.8 bits (44), Expect = 6.6
Identities = 7/21 (33%), Positives = 13/21 (61%)
Frame = +3
Query: 105 PCDISVEDTSNLTLNCSRRDI 167
P D+SVE ++ L+C + +
Sbjct: 712 PTDVSVERNKHVALHCQAQGV 732
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 194,844
Number of Sequences: 438
Number of extensions: 4035
Number of successful extensions: 17
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21926700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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