Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt4i09
         (659 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_0671 - 20571512-20571876,20571902-20572581,20573011-20573108     30   1.9  
07_03_0633 + 20120560-20123464,20123608-20123672                       29   2.5  
06_03_1130 - 27826384-27827039,27827800-27828031,27828120-278284...    29   2.5  
08_01_0378 + 3360215-3360253,3360326-3360437,3362176-3362213,336...    28   5.7  

>07_03_0671 - 20571512-20571876,20571902-20572581,20573011-20573108
          Length = 380

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 30/95 (31%), Positives = 45/95 (47%), Gaps = 4/95 (4%)
 Frame = +1

Query: 370 SAAPCFPKYFLDLSEQCKLYLYQTPRLQGL-WSKVLPSRYNEIVGLQHMKLYIVDDRVLL 546
           S AP    Y L  +E+ K++LY T  L  +  SK++ S    +  L   +LY+ D   + 
Sbjct: 214 SPAPAI--YLLRPNEKAKMHLYATSSLLKVGLSKIVKSHEEHMEDL-FKQLYVHDSDPIC 270

Query: 547 SGANCSNDYFMQR---QDRYIEIDDPDLANFYRDI 642
            G     DYF QR   Q+R+  I    +   YRD+
Sbjct: 271 QG---YVDYFEQRQLVQERFPSIGMSAMKLSYRDM 302


>07_03_0633 + 20120560-20123464,20123608-20123672
          Length = 989

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 14/32 (43%), Positives = 19/32 (59%)
 Frame = +1

Query: 418 CKLYLYQTPRLQGLWSKVLPSRYNEIVGLQHM 513
           CKL+L Q   L+G   K LP   NE+V L+ +
Sbjct: 599 CKLHLLQVLGLRGCQFKELPRAINELVNLRFL 630


>06_03_1130 - 27826384-27827039,27827800-27828031,27828120-27828491,
            27829243-27829449,27829611-27829704,27829806-27829870,
            27829946-27830398,27830467-27830760,27830837-27831295,
            27831367-27831588,27831755-27831968,27832039-27832494,
            27833280-27833389,27833468-27833644,27833758-27833979,
            27834048-27834167,27834274-27834383,27834552-27834607,
            27835252-27835440,27835602-27835775,27836066-27836281,
            27837066-27837106,27837971-27837986,27838330-27838415,
            27838737-27838910,27839093-27839149,27839720-27840064,
            27840175-27840216,27840377-27840496,27840575-27840724,
            27840830-27841534,27841609-27841954,27842978-27843080,
            27844817-27844860,27845905-27846101,27846322-27846344,
            27846802-27847122,27847406-27847579,27847843-27848047,
            27848817-27848880,27850097-27850278,27850291-27850350,
            27850688-27850748,27851249-27851313,27851491-27851569,
            27851656-27852021,27852442-27852790,27852887-27852989,
            27853103-27853373,27854296-27854405,27854515-27854652
          Length = 3364

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 9/16 (56%), Positives = 13/16 (81%)
 Frame = +1

Query: 586  QDRYIEIDDPDLANFY 633
            +DRY+  DDPD+ +FY
Sbjct: 2832 EDRYVNFDDPDIPSFY 2847


>08_01_0378 +
           3360215-3360253,3360326-3360437,3362176-3362213,
           3363949-3363966,3364629-3364847,3364937-3366727,
           3367764-3367827,3367915-3367975,3368685-3368694
          Length = 783

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = -1

Query: 587 CLCMK*SFEQFAPLSKTLSSTMYSFICCNPTI 492
           C C + ++  FA +S T SS + S +  NP I
Sbjct: 345 CHCNQDAYRSFANMSSTFSSMLVSTLLSNPAI 376


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,850,433
Number of Sequences: 37544
Number of extensions: 253847
Number of successful extensions: 597
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 584
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 597
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1655832080
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)