Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt4i09
         (659 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC108732-1|AAI08733.1|  556|Homo sapiens phosphatidylglycerophos...    91   2e-18
BC035662-1|AAH35662.1|  557|Homo sapiens PGS1 protein protein.         91   2e-18
BC025951-1|AAH25951.2|  549|Homo sapiens PGS1 protein protein.         91   2e-18
BC015570-1|AAH15570.2|  221|Homo sapiens PGS1 protein protein.         91   2e-18
BC008903-1|AAH08903.2|  221|Homo sapiens PGS1 protein protein.         91   2e-18

>BC108732-1|AAI08733.1|  556|Homo sapiens
           phosphatidylglycerophosphate synthase 1 protein.
          Length = 556

 Score = 91.5 bits (217), Expect = 2e-18
 Identities = 38/82 (46%), Positives = 61/82 (74%), Gaps = 1/82 (1%)
 Frame = +1

Query: 412 EQCKLYLYQTPRLQGLWSKVLPSRYNEIVGLQHMKLYIVDDRVLLSGANCSNDYFMQRQD 591
           EQ ++ L+ TP L+GL   ++P R+NE +GLQH+K+Y+ D+ V+LSGAN S+ YF  RQD
Sbjct: 188 EQVRVSLFHTPHLRGLLRLLIPERFNETIGLQHIKVYLFDNSVILSGANLSDSYFTNRQD 247

Query: 592 RYIEIDD-PDLANFYRDIIDEV 654
           RY+ + D  ++A+F+ +++D V
Sbjct: 248 RYVFLQDCAEIADFFTELVDAV 269


>BC035662-1|AAH35662.1|  557|Homo sapiens PGS1 protein protein.
          Length = 557

 Score = 91.5 bits (217), Expect = 2e-18
 Identities = 38/82 (46%), Positives = 61/82 (74%), Gaps = 1/82 (1%)
 Frame = +1

Query: 412 EQCKLYLYQTPRLQGLWSKVLPSRYNEIVGLQHMKLYIVDDRVLLSGANCSNDYFMQRQD 591
           EQ ++ L+ TP L+GL   ++P R+NE +GLQH+K+Y+ D+ V+LSGAN S+ YF  RQD
Sbjct: 165 EQVRVSLFHTPHLRGLLRLLIPERFNETIGLQHIKVYLFDNSVILSGANLSDSYFTNRQD 224

Query: 592 RYIEIDD-PDLANFYRDIIDEV 654
           RY+ + D  ++A+F+ +++D V
Sbjct: 225 RYVFLQDCAEIADFFTELVDAV 246


>BC025951-1|AAH25951.2|  549|Homo sapiens PGS1 protein protein.
          Length = 549

 Score = 91.5 bits (217), Expect = 2e-18
 Identities = 38/82 (46%), Positives = 61/82 (74%), Gaps = 1/82 (1%)
 Frame = +1

Query: 412 EQCKLYLYQTPRLQGLWSKVLPSRYNEIVGLQHMKLYIVDDRVLLSGANCSNDYFMQRQD 591
           EQ ++ L+ TP L+GL   ++P R+NE +GLQH+K+Y+ D+ V+LSGAN S+ YF  RQD
Sbjct: 181 EQVRVSLFHTPHLRGLLRLLIPERFNETIGLQHIKVYLFDNSVILSGANLSDSYFTNRQD 240

Query: 592 RYIEIDD-PDLANFYRDIIDEV 654
           RY+ + D  ++A+F+ +++D V
Sbjct: 241 RYVFLQDCAEIADFFTELVDAV 262


>BC015570-1|AAH15570.2|  221|Homo sapiens PGS1 protein protein.
          Length = 221

 Score = 91.5 bits (217), Expect = 2e-18
 Identities = 38/82 (46%), Positives = 61/82 (74%), Gaps = 1/82 (1%)
 Frame = +1

Query: 412 EQCKLYLYQTPRLQGLWSKVLPSRYNEIVGLQHMKLYIVDDRVLLSGANCSNDYFMQRQD 591
           EQ ++ L+ TP L+GL   ++P R+NE +GLQH+K+Y+ D+ V+LSGAN S+ YF  RQD
Sbjct: 79  EQVRVSLFHTPHLRGLLRLLIPERFNETIGLQHIKVYLFDNSVILSGANLSDSYFTNRQD 138

Query: 592 RYIEIDD-PDLANFYRDIIDEV 654
           RY+ + D  ++A+F+ +++D V
Sbjct: 139 RYVFLQDCAEIADFFTELVDAV 160


>BC008903-1|AAH08903.2|  221|Homo sapiens PGS1 protein protein.
          Length = 221

 Score = 91.5 bits (217), Expect = 2e-18
 Identities = 38/82 (46%), Positives = 61/82 (74%), Gaps = 1/82 (1%)
 Frame = +1

Query: 412 EQCKLYLYQTPRLQGLWSKVLPSRYNEIVGLQHMKLYIVDDRVLLSGANCSNDYFMQRQD 591
           EQ ++ L+ TP L+GL   ++P R+NE +GLQH+K+Y+ D+ V+LSGAN S+ YF  RQD
Sbjct: 79  EQVRVSLFHTPHLRGLLRLLIPERFNETIGLQHIKVYLFDNSVILSGANLSDSYFTNRQD 138

Query: 592 RYIEIDD-PDLANFYRDIIDEV 654
           RY+ + D  ++A+F+ +++D V
Sbjct: 139 RYVFLQDCAEIADFFTELVDAV 160


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,288,638
Number of Sequences: 237096
Number of extensions: 1488791
Number of successful extensions: 7051
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6991
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7051
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7422585720
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)